RNA–Protein interactions for RNA: ENST00000575639.1

TRAPPC1-207, Transcript of trafficking protein particle complex 1, humanhuman

TSL 2

Gene TRAPPC1, Length 561 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC1-207ENST00000575639 C5orf38Q86SI9 138 aa9.7□□□□□ -0.86
TRAPPC1-207ENST00000575639 SCGB3A1Q96QR1 104 aa9.7□□□□□ -0.86
TRAPPC1-207ENST00000575639 FAM30AQ9NZY2 134 aa9.7□□□□□ -0.86
TRAPPC1-207ENST00000575639 IGHV3-64A0A075B6Q5 118 aa9.69□□□□□ -0.86
TRAPPC1-207ENST00000575639 Q6ZSA8 131 aa9.69□□□□□ -0.86
TRAPPC1-207ENST00000575639 C18orf32Q8TCD1 76 aa9.69□□□□□ -0.86
TRAPPC1-207ENST00000575639 UBR4Q5T4S7 5183 aa9.69□□□□□ -0.86
TRAPPC1-207ENST00000575639 IGHV3OR16-9A0A0B4J2B5 98 aa9.68□□□□□ -0.86
TRAPPC1-207ENST00000575639 SLPIP03973 132 aa9.68□□□□□ -0.86
TRAPPC1-207ENST00000575639 LINC00614P0C842 121 aa9.68□□□□□ -0.86
TRAPPC1-207ENST00000575639 Q8N1X5 172 aa9.68□□□□□ -0.86
TRAPPC1-207ENST00000575639 AMELXQ99217 191 aa9.68□□□□□ -0.86
TRAPPC1-207ENST00000575639 UBE2D1P51668 147 aa9.67□□□□□ -0.86
TRAPPC1-207ENST00000575639 LINC00242Q5T6M2 205 aa9.67□□□□□ -0.86
TRAPPC1-207ENST00000575639 SDIM1Q6ZPB5 146 aa9.67□□□□□ -0.86
TRAPPC1-207ENST00000575639 HSPG2P98160 4391 aa9.67□□□□□ -0.86
TRAPPC1-207ENST00000575639 APOBP04114 4563 aaKnown RBP9.66□□□□□ -0.86
TRAPPC1-207ENST00000575639 SEC11AP67812 179 aa9.66□□□□□ -0.86
TRAPPC1-207ENST00000575639 CHAC1Q9BUX1 264 aa9.66□□□□□ -0.86
TRAPPC1-207ENST00000575639 PKIGQ9Y2B9 76 aa9.66□□□□□ -0.86
TRAPPC1-207ENST00000575639 HAMPP81172 84 aa9.65□□□□□ -0.86
TRAPPC1-207ENST00000575639 ZC2HC1BQ5TFG8 222 aa9.65□□□□□ -0.86
TRAPPC1-207ENST00000575639 LINC00173Q6ZV60 143 aa9.65□□□□□ -0.86
TRAPPC1-207ENST00000575639 OR10D4PQ8NGN7 298 aa9.65□□□□□ -0.86
TRAPPC1-207ENST00000575639 A0A087WZ39 114 aa9.64□□□□□ -0.87
TRAPPC1-207ENST00000575639 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.64□□□□□ -0.87
TRAPPC1-207ENST00000575639 SYCNQ0VAF6 134 aa9.64□□□□□ -0.87
TRAPPC1-207ENST00000575639 LINC00526Q96FQ7 95 aa9.64□□□□□ -0.87
TRAPPC1-207ENST00000575639 DPH3Q96FX2 82 aa9.64□□□□□ -0.87
TRAPPC1-207ENST00000575639 C2orf48Q96LS8 159 aa9.64□□□□□ -0.87
TRAPPC1-207ENST00000575639 CARD19Q96LW7 228 aa9.64□□□□□ -0.87
TRAPPC1-207ENST00000575639 IGLV4-69A0A075B6H9 119 aa9.63□□□□□ -0.87
TRAPPC1-207ENST00000575639 HBDP02042 147 aa9.63□□□□□ -0.87
TRAPPC1-207ENST00000575639 SMR3BP02814 79 aaPredicted RBP9.63□□□□□ -0.87
TRAPPC1-207ENST00000575639 HERVK_113P63121 156 aa9.63□□□□□ -0.87
TRAPPC1-207ENST00000575639 COX6A2Q02221 97 aa9.63□□□□□ -0.87
TRAPPC1-207ENST00000575639 SPAG11BQ08648 103 aa9.63□□□□□ -0.87
TRAPPC1-207ENST00000575639 ORAOV1Q8WV07 137 aa9.63□□□□□ -0.87
TRAPPC1-207ENST00000575639 CAMK2N2Q96S95 79 aa9.63□□□□□ -0.87
TRAPPC1-207ENST00000575639 GEMIN7Q9H840 131 aaKnown RBP9.63□□□□□ -0.87
TRAPPC1-207ENST00000575639 EPM2AB3EWF7 344 aa9.62□□□□□ -0.87
TRAPPC1-207ENST00000575639 F8WDY8 70 aa9.62□□□□□ -0.87
TRAPPC1-207ENST00000575639 FAM229AH3BQW9 127 aa9.62□□□□□ -0.87
TRAPPC1-207ENST00000575639 TRGC2P03986 189 aa9.62□□□□□ -0.87
TRAPPC1-207ENST00000575639 SCXQ7RTU7 201 aa9.62□□□□□ -0.87
TRAPPC1-207ENST00000575639 FAM19A3Q7Z5A8 133 aa9.62□□□□□ -0.87
TRAPPC1-207ENST00000575639 LINC01561Q8N1V8 128 aa9.62□□□□□ -0.87
TRAPPC1-207ENST00000575639 CHCHD1Q96BP2 118 aaKnown RBP9.62□□□□□ -0.87
TRAPPC1-207ENST00000575639 URB1-AS1Q96HZ7 61 aa9.62□□□□□ -0.87
TRAPPC1-207ENST00000575639 COLCA2A8K830 154 aa9.61□□□□□ -0.87
TRAPPC1-207ENST00000575639 PMVKQ15126 192 aa9.61□□□□□ -0.87
TRAPPC1-207ENST00000575639 BAGE3Q86Y29 109 aa9.61□□□□□ -0.87
TRAPPC1-207ENST00000575639 CIRBP-AS1Q8TBR5 109 aa9.61□□□□□ -0.87
TRAPPC1-207ENST00000575639 CST9LQ9H4G1 147 aa9.61□□□□□ -0.87
TRAPPC1-207ENST00000575639 ATP5LO75964 103 aa9.59□□□□□ -0.87
TRAPPC1-207ENST00000575639 PMCHL1Q16048 86 aa9.59□□□□□ -0.87
TRAPPC1-207ENST00000575639 PACRGQ96M98 296 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC1-207ENST00000575639 LINC00474Q9P2X8 69 aa9.59□□□□□ -0.87
TRAPPC1-207ENST00000575639 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.59□□□□□ -0.87
TRAPPC1-207ENST00000575639 A0A096LNJ9 63 aa9.58□□□□□ -0.88
TRAPPC1-207ENST00000575639 A0A0J9YXV3 536 aa9.58□□□□□ -0.88
TRAPPC1-207ENST00000575639 TINCRA0A1B0GVN0 87 aa9.58□□□□□ -0.88
TRAPPC1-207ENST00000575639 NDUFA1O15239 70 aa9.58□□□□□ -0.88
TRAPPC1-207ENST00000575639 NDUFA6P56556 154 aa9.58□□□□□ -0.88
TRAPPC1-207ENST00000575639 PDZD11Q5EBL8 140 aa9.58□□□□□ -0.88
TRAPPC1-207ENST00000575639 Q6ZRU5 148 aa9.58□□□□□ -0.88
TRAPPC1-207ENST00000575639 LINC00469Q8N7U9 141 aa9.58□□□□□ -0.88
TRAPPC1-207ENST00000575639 DNAH8Q96JB1 4490 aa9.58□□□□□ -0.88
TRAPPC1-207ENST00000575639 PRSS2P07478 247 aa9.57□□□□□ -0.88
TRAPPC1-207ENST00000575639 CIRBPQ14011 172 aaKnown RBP9.57□□□□□ -0.88
TRAPPC1-207ENST00000575639 RNF151Q2KHN1 245 aa9.57□□□□□ -0.88
TRAPPC1-207ENST00000575639 Q5VSD8 79 aa9.57□□□□□ -0.88
TRAPPC1-207ENST00000575639 CDKN2A-AS1Q9UH64 79 aa9.57□□□□□ -0.88
TRAPPC1-207ENST00000575639 IGKV2-24A0A0C4DH68 120 aa9.56□□□□□ -0.88
TRAPPC1-207ENST00000575639 LOC107984640A0A0U1RRK4 108 aa9.56□□□□□ -0.88
TRAPPC1-207ENST00000575639 HSBP1O75506 76 aa9.56□□□□□ -0.88
TRAPPC1-207ENST00000575639 MAJINQ3KP22 176 aa9.56□□□□□ -0.88
TRAPPC1-207ENST00000575639 LINC00528Q8N1L1 170 aa9.56□□□□□ -0.88
TRAPPC1-207ENST00000575639 SPACA4Q8TDM5 124 aa9.56□□□□□ -0.88
TRAPPC1-207ENST00000575639 MRPL35Q9NZE8 188 aaKnown RBP9.56□□□□□ -0.88
TRAPPC1-207ENST00000575639 PANO1I0J062 215 aa9.55□□□□□ -0.88
TRAPPC1-207ENST00000575639 SCO1O75880 301 aa9.55□□□□□ -0.88
TRAPPC1-207ENST00000575639 PLA2G1BP04054 148 aaKnown RBP9.55□□□□□ -0.88
TRAPPC1-207ENST00000575639 CHTF8P0CG12 524 aa9.55□□□□□ -0.88
TRAPPC1-207ENST00000575639 C6orf226Q5I0X4 101 aa9.55□□□□□ -0.88
TRAPPC1-207ENST00000575639 H3BRM9 83 aa9.54□□□□□ -0.88
TRAPPC1-207ENST00000575639 CKS1BP61024 79 aa9.54□□□□□ -0.88
TRAPPC1-207ENST00000575639 KIAA0087Q14695 138 aa9.54□□□□□ -0.88
TRAPPC1-207ENST00000575639 TOMM7Q9P0U1 55 aa9.54□□□□□ -0.88
TRAPPC1-207ENST00000575639 IGLV5-45A0A087WSX0 123 aa9.53□□□□□ -0.88
TRAPPC1-207ENST00000575639 A0A087WYN8 130 aa9.53□□□□□ -0.88
TRAPPC1-207ENST00000575639 A0A096LNI7 61 aa9.53□□□□□ -0.88
TRAPPC1-207ENST00000575639 GAGE2BQ13066 116 aa9.53□□□□□ -0.88
TRAPPC1-207ENST00000575639 UNQ6190/PRO20217Q6UXQ8 127 aa9.53□□□□□ -0.88
TRAPPC1-207ENST00000575639 Q8IZM0 81 aa9.53□□□□□ -0.88
TRAPPC1-207ENST00000575639 TRBV30A0A0K0K1B3 111 aa9.52□□□□□ -0.89
TRAPPC1-207ENST00000575639 PTTG1IPP53801 180 aa9.52□□□□□ -0.89
TRAPPC1-207ENST00000575639 IFI27L1Q96BM0 104 aa9.52□□□□□ -0.89
TRAPPC1-207ENST00000575639 SERF1AO75920 110 aa9.51□□□□□ -0.89
TRAPPC1-207ENST00000575639 IGLC3P0DOY3 106 aa9.51□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 388.6 ms