RNA–Protein interactions for RNA: ENST00000575194.5

SPNS3-204, Transcript of sphingolipid transporter 3 (putative), humanhuman

TSL 1 (best)

Gene SPNS3, Length 1,721 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPNS3-204ENST00000575194 DAD1P61803 113 aa13.12□□□□□ -0.31
SPNS3-204ENST00000575194 CHCHD5Q9BSY4 110 aa13.12□□□□□ -0.31
SPNS3-204ENST00000575194 GAGE6Q13070 117 aa13.11□□□□□ -0.31
SPNS3-204ENST00000575194 RPL24P83731 157 aaKnown RBP13.1□□□□□ -0.31
SPNS3-204ENST00000575194 Q8NAQ8 132 aa13.1□□□□□ -0.31
SPNS3-204ENST00000575194 PAX4O43316 350 aa13.1□□□□□ -0.31
SPNS3-204ENST00000575194 COX6A2Q02221 97 aa13.1□□□□□ -0.31
SPNS3-204ENST00000575194 IGLV5-39A0A0G2JS06 123 aa13.09□□□□□ -0.31
SPNS3-204ENST00000575194 NDUFA1O15239 70 aa13.09□□□□□ -0.31
SPNS3-204ENST00000575194 TEX48A0A1B0GUV7 120 aa13.08□□□□□ -0.32
SPNS3-204ENST00000575194 TIMM17BO60830 172 aa13.08□□□□□ -0.32
SPNS3-204ENST00000575194 SPART-AS1P0CW21 52 aa13.08□□□□□ -0.32
SPNS3-204ENST00000575194 SPANXDQ9BXN6 97 aa13.08□□□□□ -0.32
SPNS3-204ENST00000575194 SPANXCQ9NY87 97 aa13.08□□□□□ -0.32
SPNS3-204ENST00000575194 ATP5G1P05496 136 aa13.07□□□□□ -0.32
SPNS3-204ENST00000575194 NBEAL2Q6ZNJ1 2754 aa13.07□□□□□ -0.32
SPNS3-204ENST00000575194 PGPEP1Q9NXJ5 209 aa13.07□□□□□ -0.32
SPNS3-204ENST00000575194 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.06□□□□□ -0.32
SPNS3-204ENST00000575194 SMIM1B2RUZ4 78 aa13.06□□□□□ -0.32
SPNS3-204ENST00000575194 DEFB4AO15263 64 aa13.06□□□□□ -0.32
SPNS3-204ENST00000575194 APOMO95445 188 aa13.05□□□□□ -0.32
SPNS3-204ENST00000575194 LYRM7Q5U5X0 104 aa13.05□□□□□ -0.32
SPNS3-204ENST00000575194 A8MZ25 164 aa13.05□□□□□ -0.32
SPNS3-204ENST00000575194 LITAFQ99732 161 aa13.05□□□□□ -0.32
SPNS3-204ENST00000575194 TRAV26-1A0A087WT03 109 aa13.04□□□□□ -0.32
SPNS3-204ENST00000575194 CIRBPQ14011 172 aaKnown RBP13.04□□□□□ -0.32
SPNS3-204ENST00000575194 MIAQ16674 131 aa13.04□□□□□ -0.32
SPNS3-204ENST00000575194 MUSTN1Q8IVN3 82 aa13.04□□□□□ -0.32
SPNS3-204ENST00000575194 A0A0B4J2C4 111 aa13.03□□□□□ -0.32
SPNS3-204ENST00000575194 F5H768 121 aa13.03□□□□□ -0.32
SPNS3-204ENST00000575194 CFC1BP0CG36 223 aa13.03□□□□□ -0.32
SPNS3-204ENST00000575194 CFC1P0CG37 223 aa13.03□□□□□ -0.32
SPNS3-204ENST00000575194 IGLV4-60A0A075B6I1 120 aa13.02□□□□□ -0.32
SPNS3-204ENST00000575194 A0A1B0GUV1 79 aa13.02□□□□□ -0.32
SPNS3-204ENST00000575194 A4D1N5 150 aa13.02□□□□□ -0.32
SPNS3-204ENST00000575194 PRB2P02812 416 aaPredicted RBP13.02□□□□□ -0.32
SPNS3-204ENST00000575194 SH2D6Q7Z4S9 175 aa13.02□□□□□ -0.32
SPNS3-204ENST00000575194 PRO1854Q9UHT4 67 aa13.02□□□□□ -0.32
SPNS3-204ENST00000575194 CELA1Q9UNI1 258 aa13.02□□□□□ -0.32
SPNS3-204ENST00000575194 MEGF8Q7Z7M0 2845 aa13.02□□□□□ -0.33
SPNS3-204ENST00000575194 TSPAN13O95857 204 aa13.02□□□□□ -0.33
SPNS3-204ENST00000575194 IFITM1P13164 125 aa13.01□□□□□ -0.33
SPNS3-204ENST00000575194 HERV-K104P63124 156 aa13.01□□□□□ -0.33
SPNS3-204ENST00000575194 COPS9Q8WXC6 57 aa13□□□□□ -0.33
SPNS3-204ENST00000575194 Q9H8V8 135 aa13□□□□□ -0.33
SPNS3-204ENST00000575194 TMEM262E9PQX1 116 aa12.99□□□□□ -0.33
SPNS3-204ENST00000575194 K7EIL1 84 aa12.99□□□□□ -0.33
SPNS3-204ENST00000575194 PRSS2P07478 247 aa12.99□□□□□ -0.33
SPNS3-204ENST00000575194 IGKV3OR2-268A0A0C4DH90 116 aa12.98□□□□□ -0.33
SPNS3-204ENST00000575194 RBX1P62877 108 aa12.98□□□□□ -0.33
SPNS3-204ENST00000575194 MRPL23Q16540 153 aaKnown RBP12.98□□□□□ -0.33
SPNS3-204ENST00000575194 ADAMTSL4-AS1Q5T5F5 129 aa12.97□□□□□ -0.33
SPNS3-204ENST00000575194 ZNF625Q96I27 306 aaPredicted RBP12.97□□□□□ -0.33
SPNS3-204ENST00000575194 ICOSQ9Y6W8 199 aa12.97□□□□□ -0.33
SPNS3-204ENST00000575194 A0A096LPF7 62 aa12.96□□□□□ -0.33
SPNS3-204ENST00000575194 LINC00959A0A1B0GUT2 108 aa12.96□□□□□ -0.33
SPNS3-204ENST00000575194 SS18Q15532 418 aa12.96□□□□□ -0.33
SPNS3-204ENST00000575194 COX7B2Q8TF08 81 aa12.96□□□□□ -0.34
SPNS3-204ENST00000575194 LOC107984156A0A0G2JMH3 177 aa12.95□□□□□ -0.34
SPNS3-204ENST00000575194 ARL17AQ8IVW1 177 aa12.95□□□□□ -0.34
SPNS3-204ENST00000575194 ERG28Q9UKR5 140 aa12.95□□□□□ -0.34
SPNS3-204ENST00000575194 A0A087WZ39 114 aa12.94□□□□□ -0.34
SPNS3-204ENST00000575194 IGHV3OR16-9A0A0B4J2B5 98 aa12.94□□□□□ -0.34
SPNS3-204ENST00000575194 HTN3P15516 51 aa12.94□□□□□ -0.34
SPNS3-204ENST00000575194 F8W1H4 67 aa12.93□□□□□ -0.34
SPNS3-204ENST00000575194 IGHV3-33P01772 117 aa12.93□□□□□ -0.34
SPNS3-204ENST00000575194 MEIG1Q5JSS6 88 aa12.93□□□□□ -0.34
SPNS3-204ENST00000575194 SFTA2Q6UW10 78 aa12.93□□□□□ -0.34
SPNS3-204ENST00000575194 C11orf68Q9H3H3 251 aaKnown RBP12.93□□□□□ -0.34
SPNS3-204ENST00000575194 TRBV20-1A0A075B6N2 111 aa12.92□□□□□ -0.34
SPNS3-204ENST00000575194 LINC01561Q8N1V8 128 aa12.92□□□□□ -0.34
SPNS3-204ENST00000575194 PPDPFQ9H3Y8 114 aa12.92□□□□□ -0.34
SPNS3-204ENST00000575194 H3BMG7 143 aa12.91□□□□□ -0.34
SPNS3-204ENST00000575194 Q1RN00 199 aa12.91□□□□□ -0.34
SPNS3-204ENST00000575194 OCIAD2Q56VL3 154 aa12.91□□□□□ -0.34
SPNS3-204ENST00000575194 DEFB121Q5J5C9 76 aa12.91□□□□□ -0.34
SPNS3-204ENST00000575194 LELP1Q5T871 98 aa12.91□□□□□ -0.34
SPNS3-204ENST00000575194 EIF4EBP3O60516 100 aaPredicted RBP12.9□□□□□ -0.34
SPNS3-204ENST00000575194 PSMB2P49721 201 aa12.9□□□□□ -0.34
SPNS3-204ENST00000575194 TENM3Q9P273 2699 aa12.89□□□□□ -0.35
SPNS3-204ENST00000575194 K7ERU9 68 aa12.89□□□□□ -0.35
SPNS3-204ENST00000575194 NPC2P61916 151 aa12.89□□□□□ -0.35
SPNS3-204ENST00000575194 LINC00308Q8TCZ7 52 aa12.89□□□□□ -0.35
SPNS3-204ENST00000575194 RETNQ9HD89 108 aa12.89□□□□□ -0.35
SPNS3-204ENST00000575194 H3BNG1 76 aa12.88□□□□□ -0.35
SPNS3-204ENST00000575194 SCGB1C2P0DMR2 95 aa12.88□□□□□ -0.35
SPNS3-204ENST00000575194 TOMM7Q9P0U1 55 aa12.88□□□□□ -0.35
SPNS3-204ENST00000575194 COL7A1Q02388 2944 aa12.88□□□□□ -0.35
SPNS3-204ENST00000575194 XCL1P47992 114 aa12.87□□□□□ -0.35
SPNS3-204ENST00000575194 C5orf38Q86SI9 138 aa12.87□□□□□ -0.35
SPNS3-204ENST00000575194 DAND5Q8N907 189 aa12.87□□□□□ -0.35
SPNS3-204ENST00000575194 PRKDCP78527 4128 aaKnown RBP12.86□□□□□ -0.35
SPNS3-204ENST00000575194 H7C2G1 150 aa12.86□□□□□ -0.35
SPNS3-204ENST00000575194 ANGP03950 147 aaKnown RBP12.86□□□□□ -0.35
SPNS3-204ENST00000575194 LINC00269Q8N2A0 174 aa12.86□□□□□ -0.35
SPNS3-204ENST00000575194 MRAPQ8TCY5 172 aa12.86□□□□□ -0.35
SPNS3-204ENST00000575194 REG3AQ06141 175 aa12.85□□□□□ -0.35
SPNS3-204ENST00000575194 CLPSL2Q6UWE3 100 aa12.85□□□□□ -0.35
SPNS3-204ENST00000575194 TRBV30A0A0K0K1B3 111 aa12.84□□□□□ -0.35
SPNS3-204ENST00000575194 CD164L2Q6UWJ8 174 aa12.84□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms