RNA–Protein interactions for RNA: ENST00000573332.5

LITAF-212, Transcript of lipopolysaccharide induced TNF factor, humanhuman

TSL 4

Gene LITAF, Length 773 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LITAF-212ENST00000573332 ATP6V1G1O75348 118 aa11.22□□□□□ -0.61
LITAF-212ENST00000573332 ZC2HC1BQ5TFG8 222 aa11.22□□□□□ -0.61
LITAF-212ENST00000573332 CDK2AP2O75956 126 aa11.21□□□□□ -0.61
LITAF-212ENST00000573332 PDZD11Q5EBL8 140 aa11.21□□□□□ -0.61
LITAF-212ENST00000573332 C5orf38Q86SI9 138 aa11.21□□□□□ -0.61
LITAF-212ENST00000573332 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.2□□□□□ -0.62
LITAF-212ENST00000573332 SLPIP03973 132 aa11.2□□□□□ -0.62
LITAF-212ENST00000573332 MALP21145 153 aa11.2□□□□□ -0.62
LITAF-212ENST00000573332 SEC11AP67812 179 aa11.2□□□□□ -0.62
LITAF-212ENST00000573332 BAGE3Q86Y29 109 aa11.2□□□□□ -0.62
LITAF-212ENST00000573332 C9orf163Q8N9P6 203 aa11.2□□□□□ -0.62
LITAF-212ENST00000573332 APOMO95445 188 aa11.19□□□□□ -0.62
LITAF-212ENST00000573332 COX6A2Q02221 97 aa11.19□□□□□ -0.62
LITAF-212ENST00000573332 PMCHL1Q16048 86 aa11.19□□□□□ -0.62
LITAF-212ENST00000573332 HIGD2BQ4VC39 106 aa11.19□□□□□ -0.62
LITAF-212ENST00000573332 LINC01561Q8N1V8 128 aa11.19□□□□□ -0.62
LITAF-212ENST00000573332 A0A087WZ39 114 aa11.18□□□□□ -0.62
LITAF-212ENST00000573332 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.18□□□□□ -0.62
LITAF-212ENST00000573332 PMVKQ15126 192 aa11.18□□□□□ -0.62
LITAF-212ENST00000573332 CST9LQ9H4G1 147 aa11.18□□□□□ -0.62
LITAF-212ENST00000573332 HSBP1O75506 76 aa11.17□□□□□ -0.62
LITAF-212ENST00000573332 ATP5LO75964 103 aa11.17□□□□□ -0.62
LITAF-212ENST00000573332 IGHV3-64A0A075B6Q5 118 aa11.16□□□□□ -0.62
LITAF-212ENST00000573332 ZNF561-AS1K7EIQ3 104 aa11.16□□□□□ -0.62
LITAF-212ENST00000573332 LINC00310P59036 64 aa11.16□□□□□ -0.62
LITAF-212ENST00000573332 HERVK_113P63121 156 aa11.16□□□□□ -0.62
LITAF-212ENST00000573332 Q6ZSA8 131 aa11.16□□□□□ -0.62
LITAF-212ENST00000573332 OR10D4PQ8NGN7 298 aa11.16□□□□□ -0.62
LITAF-212ENST00000573332 SERF1AO75920 110 aa11.15□□□□□ -0.62
LITAF-212ENST00000573332 LINC01620Q4KN68 170 aa11.15□□□□□ -0.62
LITAF-212ENST00000573332 A0A0J9YXV3 536 aa11.14□□□□□ -0.63
LITAF-212ENST00000573332 TINCRA0A1B0GVN0 87 aa11.14□□□□□ -0.63
LITAF-212ENST00000573332 C2orf48Q96LS8 159 aa11.14□□□□□ -0.63
LITAF-212ENST00000573332 IGLV4-69A0A075B6H9 119 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 F8WDY8 70 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST1H2BKO60814 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST1H2BJP06899 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST1H2BOP23527 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST1H2BBP33778 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 XGP55808 180 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST1H2BDP58876 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST1H2BCP62807 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST2H2BEQ16778 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.13□□□□□ -0.63
LITAF-212ENST00000573332 SDIM1Q6ZPB5 146 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST1H2BHQ93079 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST1H2BNQ99877 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 HIST1H2BMQ99879 126 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 GEMIN7Q9H840 131 aaKnown RBP11.13□□□□□ -0.63
LITAF-212ENST00000573332 FAM30AQ9NZY2 134 aa11.13□□□□□ -0.63
LITAF-212ENST00000573332 KIAA1109Q2LD37 5005 aa11.12□□□□□ -0.63
LITAF-212ENST00000573332 IGLV5-45A0A087WSX0 123 aa11.12□□□□□ -0.63
LITAF-212ENST00000573332 SPAG11BQ08648 103 aa11.12□□□□□ -0.63
LITAF-212ENST00000573332 FAM19A2Q8N3H0 131 aa11.12□□□□□ -0.63
LITAF-212ENST00000573332 ORAOV1Q8WV07 137 aa11.12□□□□□ -0.63
LITAF-212ENST00000573332 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
LITAF-212ENST00000573332 NUPR1O60356 82 aa11.11□□□□□ -0.63
LITAF-212ENST00000573332 SYCNQ0VAF6 134 aa11.11□□□□□ -0.63
LITAF-212ENST00000573332 CDKN2A-AS1Q9UH64 79 aa11.11□□□□□ -0.63
LITAF-212ENST00000573332 APOBP04114 4563 aaKnown RBP11.11□□□□□ -0.63
LITAF-212ENST00000573332 KIAA0087Q14695 138 aa11.1□□□□□ -0.63
LITAF-212ENST00000573332 IFI27L1Q96BM0 104 aa11.1□□□□□ -0.63
LITAF-212ENST00000573332 CARD19Q96LW7 228 aa11.1□□□□□ -0.63
LITAF-212ENST00000573332 IGLC3P0DOY3 106 aa11.09□□□□□ -0.63
LITAF-212ENST00000573332 NDUFA6P56556 154 aa11.09□□□□□ -0.63
LITAF-212ENST00000573332 RYR1P21817 5038 aa11.08□□□□□ -0.64
LITAF-212ENST00000573332 DNAH8Q96JB1 4490 aa11.08□□□□□ -0.64
LITAF-212ENST00000573332 TRAV12-1A0A0B4J245 112 aa11.08□□□□□ -0.64
LITAF-212ENST00000573332 LINC00469Q8N7U9 141 aa11.08□□□□□ -0.64
LITAF-212ENST00000573332 CAMK2N2Q96S95 79 aa11.08□□□□□ -0.64
LITAF-212ENST00000573332 LEPROTL1O95214 131 aa11.07□□□□□ -0.64
LITAF-212ENST00000573332 RNF151Q2KHN1 245 aa11.07□□□□□ -0.64
LITAF-212ENST00000573332 Q6ZRU5 148 aa11.07□□□□□ -0.64
LITAF-212ENST00000573332 PKIGQ9Y2B9 76 aa11.07□□□□□ -0.64
LITAF-212ENST00000573332 CIRBPQ14011 172 aaKnown RBP11.06□□□□□ -0.64
LITAF-212ENST00000573332 COA6Q5JTJ3 125 aaKnown RBP11.06□□□□□ -0.64
LITAF-212ENST00000573332 PACRGQ96M98 296 aaPredicted RBP11.06□□□□□ -0.64
LITAF-212ENST00000573332 CHAC1Q9BUX1 264 aa11.06□□□□□ -0.64
LITAF-212ENST00000573332 MRPL35Q9NZE8 188 aaKnown RBP11.06□□□□□ -0.64
LITAF-212ENST00000573332 HERC2O95714 4834 aa11.05□□□□□ -0.64
LITAF-212ENST00000573332 SMIM1B2RUZ4 78 aa11.05□□□□□ -0.64
LITAF-212ENST00000573332 NDUFA1O15239 70 aa11.05□□□□□ -0.64
LITAF-212ENST00000573332 Q8IZM0 81 aa11.05□□□□□ -0.64
LITAF-212ENST00000573332 HSPB8Q9UJY1 196 aa11.05□□□□□ -0.64
LITAF-212ENST00000573332 CHTOPQ9Y3Y2 248 aaKnown RBP11.05□□□□□ -0.64
LITAF-212ENST00000573332 HSPG2P98160 4391 aa11.04□□□□□ -0.64
LITAF-212ENST00000573332 H3BRM9 83 aa11.04□□□□□ -0.64
LITAF-212ENST00000573332 ZNF22P17026 224 aaPredicted RBP11.03□□□□□ -0.64
LITAF-212ENST00000573332 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.03□□□□□ -0.64
LITAF-212ENST00000573332 C11orf86A6NJI1 115 aa11.02□□□□□ -0.65
LITAF-212ENST00000573332 F8VRH5 84 aa11.02□□□□□ -0.65
LITAF-212ENST00000573332 PRSS2P07478 247 aa11.02□□□□□ -0.65
LITAF-212ENST00000573332 C6orf226Q5I0X4 101 aa11.02□□□□□ -0.65
LITAF-212ENST00000573332 UNQ6190/PRO20217Q6UXQ8 127 aa11.02□□□□□ -0.65
LITAF-212ENST00000573332 SCXQ7RTU7 201 aa11.02□□□□□ -0.65
LITAF-212ENST00000573332 PANO1I0J062 215 aa11.01□□□□□ -0.65
LITAF-212ENST00000573332 FABP4P15090 132 aa11.01□□□□□ -0.65
LITAF-212ENST00000573332 C10orf25Q5T742 122 aa11.01□□□□□ -0.65
LITAF-212ENST00000573332 Q8N1X5 172 aa11.01□□□□□ -0.65
LITAF-212ENST00000573332 CIRBP-AS1Q8TBR5 109 aa11.01□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms