RNA–Protein interactions for RNA: ENST00000573209.1

CHRNB1-205, Transcript of cholinergic receptor nicotinic beta 1 subunit, humanhuman

TSL 2

Gene CHRNB1, Length 2,394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNB1-205ENST00000573209 IGHV3OR16-8A0A075B7F1 116 aa7.57□□□□□ -1.2
CHRNB1-205ENST00000573209 IGHV3-35A0A0C4DH35 117 aa7.57□□□□□ -1.2
CHRNB1-205ENST00000573209 CD28P10747 220 aa7.57□□□□□ -1.2
CHRNB1-205ENST00000573209 AKAP6Q13023 2319 aa7.57□□□□□ -1.2
CHRNB1-205ENST00000573209 FAM218AQ96MZ4 157 aa7.57□□□□□ -1.2
CHRNB1-205ENST00000573209 TRBV7-4A0A0J9YYF1 115 aa7.57□□□□□ -1.2
CHRNB1-205ENST00000573209 ERC2-IT1O76042 136 aa7.57□□□□□ -1.2
CHRNB1-205ENST00000573209 CLEC19AQ6UXS0 136 aa7.57□□□□□ -1.2
CHRNB1-205ENST00000573209 ZFP36P26651 326 aaKnown RBP7.56□□□□□ -1.2
CHRNB1-205ENST00000573209 RPL39P62891 51 aaKnown RBP7.56□□□□□ -1.2
CHRNB1-205ENST00000573209 UBL5Q9BZL1 73 aa7.56□□□□□ -1.2
CHRNB1-205ENST00000573209 MED13LQ71F56 2210 aa7.56□□□□□ -1.2
CHRNB1-205ENST00000573209 SERTAD4-AS1Q5TG53 156 aa7.56□□□□□ -1.2
CHRNB1-205ENST00000573209 PHF5AQ7RTV0 110 aaKnown RBP7.56□□□□□ -1.2
CHRNB1-205ENST00000573209 Q9HAA7 133 aa7.56□□□□□ -1.2
CHRNB1-205ENST00000573209 FASNP49327 2511 aaKnown RBP7.56□□□□□ -1.2
CHRNB1-205ENST00000573209 UTP20O75691 2785 aaKnown RBP7.56□□□□□ -1.2
CHRNB1-205ENST00000573209 VCYO14598 125 aa7.55□□□□□ -1.2
CHRNB1-205ENST00000573209 FUSP35637 526 aaKnown RBP eCLIP7.55□□□□□ -1.2
CHRNB1-205ENST00000573209 PRR26Q8N8Z3 221 aa7.55□□□□□ -1.2
CHRNB1-205ENST00000573209 IGHV3-66A0A0C4DH42 116 aa7.55□□□□□ -1.2
CHRNB1-205ENST00000573209 PIK3CD-AS1Q5SR53 167 aa7.55□□□□□ -1.2
CHRNB1-205ENST00000573209 TENM4Q6N022 2769 aa7.55□□□□□ -1.2
CHRNB1-205ENST00000573209 HELZ2Q9BYK8 2649 aaKnown RBP7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 MGPP08493 103 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 MED14OSP0DP75 135 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 ZNF580Q9UK33 172 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 WNK2Q9Y3S1 2297 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 HIVEP3Q5T1R4 2406 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 F6UB75 175 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 CRYBG3Q68DQ2 2970 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 GPHB5Q86YW7 130 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 C5orf56Q8N8D9 126 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 ITLN2Q8WWU7 325 aaPredicted RBP7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 MYO18BQ8IUG5 2567 aa7.54□□□□□ -1.2
CHRNB1-205ENST00000573209 G3V318 75 aa7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 POLR2KP53803 58 aaKnown RBP7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 C9orf129Q5T035 196 aaKnown RBP7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 LINC00308Q8TCZ7 52 aa7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 CSMD2Q7Z408 3487 aa7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 TRAV21A0A0B4J279 112 aa7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 A0A0J9YXV3 536 aa7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 C19orf54Q5BKX5 351 aa7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 Q6ZRP5 223 aa7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 TMEM254Q8TBM7 123 aa7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 OPRPNQ99935 248 aaPredicted RBP7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 GCN1Q92616 2671 aaKnown RBP7.53□□□□□ -1.2
CHRNB1-205ENST00000573209 CELSR2Q9HCU4 2923 aa7.52□□□□□ -1.21
CHRNB1-205ENST00000573209 IGHV4OR15-8A0A075B7B6 117 aa7.52□□□□□ -1.21
CHRNB1-205ENST00000573209 IGHV3OR16-13A0A075B7E8 117 aa7.52□□□□□ -1.21
CHRNB1-205ENST00000573209 A0A087WW49 117 aa7.52□□□□□ -1.21
CHRNB1-205ENST00000573209 IGHV3-74A0A0B4J1X5 117 aa7.52□□□□□ -1.21
CHRNB1-205ENST00000573209 ZNF625Q96I27 306 aaPredicted RBP7.52□□□□□ -1.21
CHRNB1-205ENST00000573209 SPTAN1Q13813 2472 aaKnown RBP7.52□□□□□ -1.21
CHRNB1-205ENST00000573209 Q6ZTC4 211 aa7.52□□□□□ -1.21
CHRNB1-205ENST00000573209 IGHV3-49A0A0A0MS15 119 aa7.51□□□□□ -1.21
CHRNB1-205ENST00000573209 hDV103S1A0JD37 113 aa7.51□□□□□ -1.21
CHRNB1-205ENST00000573209 PRYO14603 147 aa7.51□□□□□ -1.21
CHRNB1-205ENST00000573209 PRR9Q5T870 116 aa7.51□□□□□ -1.21
CHRNB1-205ENST00000573209 ZFAND2AQ8N6M9 145 aa7.51□□□□□ -1.21
CHRNB1-205ENST00000573209 TRAV10A0A0B4J240 114 aa7.51□□□□□ -1.21
CHRNB1-205ENST00000573209 JMJD7-PLA2G4BH0Y9G9 81 aa7.51□□□□□ -1.21
CHRNB1-205ENST00000573209 NDUFA4O00483 81 aa7.51□□□□□ -1.21
CHRNB1-205ENST00000573209 NBPF19A0A087WUL8 3843 aa7.5□□□□□ -1.21
CHRNB1-205ENST00000573209 NCR3O14931 201 aa7.5□□□□□ -1.21
CHRNB1-205ENST00000573209 LCA10Q71F78 164 aa7.5□□□□□ -1.21
CHRNB1-205ENST00000573209 H0YGX0 51 aa7.49□□□□□ -1.21
CHRNB1-205ENST00000573209 H3BUA1 57 aa7.49□□□□□ -1.21
CHRNB1-205ENST00000573209 S100A4P26447 101 aaKnown RBP7.49□□□□□ -1.21
CHRNB1-205ENST00000573209 LMO4P61968 165 aa7.49□□□□□ -1.21
CHRNB1-205ENST00000573209 SPATA3Q8NHX4 192 aa7.49□□□□□ -1.21
CHRNB1-205ENST00000573209 NDUFA1O15239 70 aa7.49□□□□□ -1.21
CHRNB1-205ENST00000573209 UBE2AP49459 152 aa7.49□□□□□ -1.21
CHRNB1-205ENST00000573209 USP9XQ93008 2570 aaPredicted RBP7.49□□□□□ -1.21
CHRNB1-205ENST00000573209 SYCNQ0VAF6 134 aa7.48□□□□□ -1.21
CHRNB1-205ENST00000573209 C7orf65Q6ZTY9 151 aa7.48□□□□□ -1.21
CHRNB1-205ENST00000573209 ZNF843Q8N446 348 aa7.48□□□□□ -1.21
CHRNB1-205ENST00000573209 USMG5Q96IX5 58 aa7.48□□□□□ -1.21
CHRNB1-205ENST00000573209 ORMDL1Q9P0S3 153 aa7.48□□□□□ -1.21
CHRNB1-205ENST00000573209 TRAV22A0A0B4J277 110 aa7.47□□□□□ -1.21
CHRNB1-205ENST00000573209 A0A1W2PPR1 153 aa7.47□□□□□ -1.21
CHRNB1-205ENST00000573209 PSPHP1O15172 72 aa7.47□□□□□ -1.21
CHRNB1-205ENST00000573209 NREPQ16612 68 aa7.47□□□□□ -1.21
CHRNB1-205ENST00000573209 ATP11AUNQ6ZP68 121 aa7.47□□□□□ -1.21
CHRNB1-205ENST00000573209 MIR7-3HGQ8N6C7 128 aa7.47□□□□□ -1.21
CHRNB1-205ENST00000573209 UBR5O95071 2799 aaPredicted RBP7.47□□□□□ -1.21
CHRNB1-205ENST00000573209 IGLV4-3A0A075B6K6 122 aa7.47□□□□□ -1.21
CHRNB1-205ENST00000573209 LRRK2Q5S007 2527 aa7.46□□□□□ -1.21
CHRNB1-205ENST00000573209 TRBV6-5A0A0K0K1A5 114 aa7.46□□□□□ -1.21
CHRNB1-205ENST00000573209 A0A087WYN8 130 aa7.46□□□□□ -1.22
CHRNB1-205ENST00000573209 A8MUN3 132 aa7.46□□□□□ -1.22
CHRNB1-205ENST00000573209 RNASE3P12724 160 aaKnown RBP7.45□□□□□ -1.22
CHRNB1-205ENST00000573209 LINC00269Q8N2A0 174 aa7.45□□□□□ -1.22
CHRNB1-205ENST00000573209 DIRC1Q969H9 104 aa7.45□□□□□ -1.22
CHRNB1-205ENST00000573209 MUC4Q99102 2169 aa7.45□□□□□ -1.22
CHRNB1-205ENST00000573209 A6NN06 94 aa7.45□□□□□ -1.22
CHRNB1-205ENST00000573209 CRPP02741 224 aa7.45□□□□□ -1.22
CHRNB1-205ENST00000573209 CXCL6P80162 114 aa7.45□□□□□ -1.22
CHRNB1-205ENST00000573209 CENPEQ02224 2701 aa7.44□□□□□ -1.22
CHRNB1-205ENST00000573209 C20orf203Q8NBC4 194 aa7.44□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms