RNA–Protein interactions for RNA: ENST00000572365.1

SF3B3-214, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 4

Gene SF3B3, Length 575 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-214ENST00000572365 IGKV1-5P01602 117 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 IGKCP01834 107 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 PLNP26678 52 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 NMUP48645 174 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 CLEC19AQ6UXS0 136 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 UNQ9165/PRO28630Q6UXU0 137 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 SH2D6Q7Z4S9 175 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 C6orf223Q8N319 242 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 C10orf126Q8N4M7 172 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 C3orf22Q8N5N4 141 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 Q8NAQ8 132 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 RNASE7Q9H1E1 156 aaKnown RBP3.62□□□□□ -1.83
SF3B3-214ENST00000572365 NXT2Q9NPJ8 142 aaKnown RBP3.62□□□□□ -1.83
SF3B3-214ENST00000572365 LRP2P98164 4655 aa3.62□□□□□ -1.83
SF3B3-214ENST00000572365 TRBV25-1A0A075B6N4 114 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 TRAV8-2A0A0B4J237 113 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 F5H768 121 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 M0R2P5 195 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 SPINK4O60575 86 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 SAA2P0DJI9 122 aaPredicted RBP3.61□□□□□ -1.83
SF3B3-214ENST00000572365 CXCL5P42830 114 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 KRTAP10-1P60331 282 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 TMEM258P61165 79 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 UBE2L3P68036 154 aaKnown RBP3.61□□□□□ -1.83
SF3B3-214ENST00000572365 TMEM170BQ5T4T1 132 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 C9orf153Q5TBE3 101 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 ZNF493Q6ZR52 646 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 KIR2DL5BQ8NHK3 375 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 LINC00526Q96FQ7 95 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 Q9H3A6 140 aa3.61□□□□□ -1.83
SF3B3-214ENST00000572365 C11orf68Q9H3H3 251 aaKnown RBP3.61□□□□□ -1.83
SF3B3-214ENST00000572365 IGHV3-49A0A0A0MS15 119 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 TRAV2A0A0B4J234 112 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 IGKV1D-13A0A0B4J2D9 117 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 A0A0G2JRQ6 117 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 TRBV7-7A0A0K0K1E9 115 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 TMEM30CPA0ZSE6 113 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 NDUFC2-KCTD14E9PQ53 114 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 K7EMI3 77 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 PEX7O00628 323 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 IGLV2-8P01709 118 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 IGKV1-16P04430 117 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 IGKV1-13P0DP09 117 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 ZNF137PP52743 207 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 HSPE1P61604 102 aaKnown RBP3.6□□□□□ -1.83
SF3B3-214ENST00000572365 ORMDL3Q8N138 153 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 OR8A1Q8NGG7 326 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 USMG5Q96IX5 58 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 SLC25A39Q9BZJ4 359 aaPredicted RBP3.6□□□□□ -1.83
SF3B3-214ENST00000572365 PRO0628Q9UI54 55 aa3.6□□□□□ -1.83
SF3B3-214ENST00000572365 FAT3Q8TDW7 4589 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 IGHV1OR15-1A0A075B7D0 117 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 IGHV3OR16-13A0A075B7E8 117 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 IGHV3-74A0A0B4J1X5 117 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 NBDYA0A0U1RRE5 68 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 LINC01546A6NGU7 62 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 CCDC179H3BU77 68 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 ATOX1O00244 68 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 IGKV1-39P01597 117 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 TRACP01848 142 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 IGKV1D-39P04432 117 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 CRYGDP07320 174 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 COX6CP09669 75 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 FCER1GP30273 86 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 PSMB2P49721 201 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 FXYD2P54710 66 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 UBE2D3P61077 147 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 UBE2D2P62837 147 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 CACNG7P62955 275 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 ATXN8Q156A1 80 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 MIC13Q5XKP0 118 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 ZNF833PQ6ZTB9 187 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 PRR34Q9NV39 138 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 TP73-AS1Q9UF72 201 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 LAMTOR3Q9UHA4 124 aa3.59□□□□□ -1.83
SF3B3-214ENST00000572365 PKHD1L1Q86WI1 4243 aa3.59□□□□□ -1.84
SF3B3-214ENST00000572365 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.58□□□□□ -1.84
SF3B3-214ENST00000572365 TRAV12-1A0A0B4J245 112 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 LOC107984156A0A0G2JMH3 177 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 C19orf71A6NCJ1 209 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 H3BT86 120 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 CRYGAP11844 174 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 HERVK_113P61574 105 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 C10orf55Q5SWW7 151 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 FAM19A5Q7Z5A7 132 aaPredicted RBP3.58□□□□□ -1.84
SF3B3-214ENST00000572365 ARL17AQ8IVW1 177 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 AMN1Q8IY45 258 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 C8orf31Q8N9H6 132 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 TRGV9Q99603 122 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 PRNDQ9UKY0 176 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 EPDR1Q9UM22 224 aa3.58□□□□□ -1.84
SF3B3-214ENST00000572365 H3BMM0 161 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 H3BUA1 57 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 SLC25A20O43772 301 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 COX7A2P2O60397 106 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 LINC00694P0DN24 101 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 COX7CP15954 63 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 LEPP41159 167 aa3.57□□□□□ -1.84
SF3B3-214ENST00000572365 C9orf129Q5T035 196 aaKnown RBP3.57□□□□□ -1.84
SF3B3-214ENST00000572365 GPHB5Q86YW7 130 aa3.57□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 115.8 ms