RNA–Protein interactions for RNA: ENST00000570659.5

SMG6-205, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 592 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-205ENST00000570659 CRYGAP11844 174 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 RPS20P60866 119 aaKnown RBP4.08□□□□□ -1.76
SMG6-205ENST00000570659 UBE2G1P62253 170 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 KRTAP13-3Q3SY46 172 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 AMMECR1LQ6DCA0 310 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 TEX261Q6UWH6 196 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 CD164L2Q6UWJ8 174 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 TYMSOSQ8TAI1 123 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 FAM104AQ969W3 186 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 PSMG3Q9BT73 122 aaPredicted RBP4.08□□□□□ -1.76
SMG6-205ENST00000570659 KRTAP3-3Q9BYR6 98 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 KRTAP3-2Q9BYR7 98 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 NKX6-2Q9C056 277 aaPredicted RBP4.08□□□□□ -1.76
SMG6-205ENST00000570659 ACTR3CQ9C0K3 210 aaPredicted RBP4.08□□□□□ -1.76
SMG6-205ENST00000570659 PPDPFQ9H3Y8 114 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 C6orf48Q9UBA6 75 aa4.08□□□□□ -1.76
SMG6-205ENST00000570659 FLGP20930 4061 aaPredicted RBP4.07□□□□□ -1.76
SMG6-205ENST00000570659 ZNF861PO60384 105 aa4.07□□□□□ -1.76
SMG6-205ENST00000570659 SMIM17P0DL12 118 aa4.07□□□□□ -1.76
SMG6-205ENST00000570659 ESDP10768 282 aa4.07□□□□□ -1.76
SMG6-205ENST00000570659 SNRPEP62304 92 aaKnown RBP4.07□□□□□ -1.76
SMG6-205ENST00000570659 GAGE2EQ4V326 116 aa4.07□□□□□ -1.76
SMG6-205ENST00000570659 LINC00242Q5T6M2 205 aa4.07□□□□□ -1.76
SMG6-205ENST00000570659 RPL7L1Q6DKI1 246 aaKnown RBP4.07□□□□□ -1.76
SMG6-205ENST00000570659 UNQ6190/PRO20217Q6UXQ8 127 aa4.07□□□□□ -1.76
SMG6-205ENST00000570659 MED28Q9H204 178 aa4.07□□□□□ -1.76
SMG6-205ENST00000570659 CDC42SE2Q9NRR3 84 aa4.07□□□□□ -1.76
SMG6-205ENST00000570659 GAGE2DQ9UEU5 116 aa4.07□□□□□ -1.76
SMG6-205ENST00000570659 FCGBPQ9Y6R7 5405 aaPredicted RBP4.06□□□□□ -1.76
SMG6-205ENST00000570659 CTXND1A0A1B0GTU2 59 aa4.06□□□□□ -1.76
SMG6-205ENST00000570659 SPAG11BQ08648 103 aa4.06□□□□□ -1.76
SMG6-205ENST00000570659 LYZL1Q6UWQ5 148 aa4.06□□□□□ -1.76
SMG6-205ENST00000570659 LINC00173Q6ZV60 143 aa4.06□□□□□ -1.76
SMG6-205ENST00000570659 TMEM242Q9NWH2 141 aa4.06□□□□□ -1.76
SMG6-205ENST00000570659 TNFSF18Q9UNG2 199 aa4.06□□□□□ -1.76
SMG6-205ENST00000570659 A0A1B0GV50 99 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 PAGE4O60829 102 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 FABP9Q0Z7S8 132 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 AKR1C8PQ5T2L2 129 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 ERASQ7Z444 233 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 BAGE2Q86Y30 109 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 SVBPQ8N300 66 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 C2orf48Q96LS8 159 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 CTDSP1Q9GZU7 261 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 SMDT1Q9H4I9 107 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 SPANXA1Q9NS26 97 aa4.05□□□□□ -1.76
SMG6-205ENST00000570659 MAP1LC3B2A6NCE7 125 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 C19orf71A6NCJ1 209 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 SDHAF1A6NFY7 115 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 COX7A2LO14548 114 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 APOC3P02656 99 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 APCSP02743 223 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 SEC61GP60059 68 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 UBE2BP63146 152 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 LINC00304Q8N9R0 145 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 MARVELD1Q9BSK0 173 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 MAP1LC3BQ9GZQ8 125 aa4.04□□□□□ -1.76
SMG6-205ENST00000570659 TRBV20OR9-2A0A075B6H5 130 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 TGIF2-C20orf24A0A0A6YYL0 155 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 G3V3Q6 166 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 PDE6DO43924 150 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 CKS1BP61024 79 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 SERF2P84101 59 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 KIAA0087Q14695 138 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 PDZD11Q5EBL8 140 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 COL5A1-AS1Q5SY13 56 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 EIF5AL1Q6IS14 154 aaKnown RBP4.03□□□□□ -1.76
SMG6-205ENST00000570659 C2orf82Q6UX34 121 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 Q6ZUT4 128 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 KRTAP13-1Q8IUC0 172 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 C3orf22Q8N5N4 141 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 ORAOV1Q8WV07 137 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 ISOC2Q96AB3 205 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 MRPL35Q9NZE8 188 aaKnown RBP4.03□□□□□ -1.76
SMG6-205ENST00000570659 PKIGQ9Y2B9 76 aa4.03□□□□□ -1.76
SMG6-205ENST00000570659 TRAV13-1A0A0B4J241 112 aa4.02□□□□□ -1.77
SMG6-205ENST00000570659 TLX1NBP0CAT3 122 aa4.02□□□□□ -1.77
SMG6-205ENST00000570659 MALP21145 153 aa4.02□□□□□ -1.77
SMG6-205ENST00000570659 FAM74A3Q4VXF1 159 aa4.02□□□□□ -1.77
SMG6-205ENST00000570659 TSKUQ8WUA8 353 aa4.02□□□□□ -1.77
SMG6-205ENST00000570659 H7C423 109 aa4.01□□□□□ -1.77
SMG6-205ENST00000570659 NCR2O95944 276 aa4.01□□□□□ -1.77
SMG6-205ENST00000570659 CTRLP40313 264 aa4.01□□□□□ -1.77
SMG6-205ENST00000570659 CCL20P78556 96 aa4.01□□□□□ -1.77
SMG6-205ENST00000570659 PEA15Q15121 130 aa4.01□□□□□ -1.77
SMG6-205ENST00000570659 UQCC3Q6UW78 93 aa4.01□□□□□ -1.77
SMG6-205ENST00000570659 CYTL1Q9NRR1 136 aa4.01□□□□□ -1.77
SMG6-205ENST00000570659 IGHV3OR16-9A0A0B4J2B5 98 aa4□□□□□ -1.77
SMG6-205ENST00000570659 TMEM218A2RU14 115 aa4□□□□□ -1.77
SMG6-205ENST00000570659 KRTAP4-16G5E9R7 235 aaPredicted RBP4□□□□□ -1.77
SMG6-205ENST00000570659 UBE2V1Q13404 147 aa4□□□□□ -1.77
SMG6-205ENST00000570659 OCIAD2Q56VL3 154 aa4□□□□□ -1.77
SMG6-205ENST00000570659 CENPWQ5EE01 88 aa4□□□□□ -1.77
SMG6-205ENST00000570659 TMUB2Q71RG4 321 aa4□□□□□ -1.77
SMG6-205ENST00000570659 SNHG12Q9BXW3 62 aa4□□□□□ -1.77
SMG6-205ENST00000570659 UBE2D4Q9Y2X8 147 aa4□□□□□ -1.77
SMG6-205ENST00000570659 C22orf24Q9Y442 160 aa4□□□□□ -1.77
SMG6-205ENST00000570659 SMKR1H3BMG3 65 aa3.99□□□□□ -1.77
SMG6-205ENST00000570659 I3L3M4 83 aa3.99□□□□□ -1.77
SMG6-205ENST00000570659 POLR2KP53803 58 aaKnown RBP3.99□□□□□ -1.77
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms