RNA–Protein interactions for RNA: ENST00000570188.1

RBFOX1-220, Transcript of RNA binding fox-1 homolog 1, humanhuman

TSL 2

Gene RBFOX1, Length 568 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBFOX1-220ENST00000570188 COX8AP10176 69 aa6.68□□□□□ -1.34
RBFOX1-220ENST00000570188 ZNF22P17026 224 aaPredicted RBP6.68□□□□□ -1.34
RBFOX1-220ENST00000570188 RBX1P62877 108 aa6.68□□□□□ -1.34
RBFOX1-220ENST00000570188 MPV17L2Q567V2 206 aa6.68□□□□□ -1.34
RBFOX1-220ENST00000570188 SLC25A34Q6PIV7 304 aa6.68□□□□□ -1.34
RBFOX1-220ENST00000570188 GEMIN7Q9H840 131 aaKnown RBP6.68□□□□□ -1.34
RBFOX1-220ENST00000570188 TP73-AS1Q9UF72 201 aa6.68□□□□□ -1.34
RBFOX1-220ENST00000570188 TRAV13-1A0A0B4J241 112 aa6.67□□□□□ -1.34
RBFOX1-220ENST00000570188 TRAV8-6A0A0B4J262 113 aa6.67□□□□□ -1.34
RBFOX1-220ENST00000570188 LINC00587B1AMM8 73 aa6.67□□□□□ -1.34
RBFOX1-220ENST00000570188 E9PLD3 99 aa6.67□□□□□ -1.34
RBFOX1-220ENST00000570188 HNRNPA3P51991 378 aaKnown RBP6.67□□□□□ -1.34
RBFOX1-220ENST00000570188 LYPD5Q6UWN5 251 aa6.67□□□□□ -1.34
RBFOX1-220ENST00000570188 IGKV3OR2-268A0A0C4DH90 116 aa6.66□□□□□ -1.34
RBFOX1-220ENST00000570188 A0A1B0GUV1 79 aa6.66□□□□□ -1.34
RBFOX1-220ENST00000570188 TMEM223A0PJW6 202 aa6.66□□□□□ -1.34
RBFOX1-220ENST00000570188 SEC11AP67812 179 aa6.66□□□□□ -1.34
RBFOX1-220ENST00000570188 PCP2Q8IVA1 136 aa6.66□□□□□ -1.34
RBFOX1-220ENST00000570188 LINC00469Q8N7U9 141 aa6.66□□□□□ -1.34
RBFOX1-220ENST00000570188 C15orf53Q8NAA6 179 aa6.66□□□□□ -1.34
RBFOX1-220ENST00000570188 DNHD1Q96M86 4753 aa6.65□□□□□ -1.34
RBFOX1-220ENST00000570188 DLEU1O43261 78 aa6.65□□□□□ -1.34
RBFOX1-220ENST00000570188 HERVK_113P63121 156 aa6.65□□□□□ -1.34
RBFOX1-220ENST00000570188 LINC00242Q5T6M2 205 aa6.65□□□□□ -1.34
RBFOX1-220ENST00000570188 FAM19A3Q7Z5A8 133 aa6.65□□□□□ -1.34
RBFOX1-220ENST00000570188 BOD1L2Q8IYS8 172 aa6.65□□□□□ -1.34
RBFOX1-220ENST00000570188 IGHV3-64A0A075B6Q5 118 aa6.64□□□□□ -1.35
RBFOX1-220ENST00000570188 IGLV5-45A0A087WSX0 123 aa6.64□□□□□ -1.35
RBFOX1-220ENST00000570188 H3BRM9 83 aa6.64□□□□□ -1.35
RBFOX1-220ENST00000570188 ANGP03950 147 aaKnown RBP6.64□□□□□ -1.35
RBFOX1-220ENST00000570188 CLPSL2Q6UWE3 100 aa6.64□□□□□ -1.35
RBFOX1-220ENST00000570188 TTTY13Q9BZ97 58 aa6.64□□□□□ -1.35
RBFOX1-220ENST00000570188 IGLL5B9A064 214 aa6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 LEPROTO15243 131 aa6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 SPINK8P0C7L1 97 aa6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 LGALS3P17931 250 aaKnown RBP6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 CTAG1AP78358 180 aa6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 COX6A2Q02221 97 aa6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 ESRGQ1W209 222 aa6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 WFDC10BQ8IUB3 73 aa6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 PLEKHB2Q96CS7 222 aa6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 CDKN2A-AS1Q9UH64 79 aa6.63□□□□□ -1.35
RBFOX1-220ENST00000570188 LINC00959A0A1B0GUT2 108 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 J3QQQ9 107 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 IGHV3-30P01768 117 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 IGHV3-33P01772 117 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 IGHV3-30-3P0DP02 117 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 IGHV3-30-5P0DP03 117 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 TSPEAR-AS2P59090 65 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 SS18Q15532 418 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 C2orf91Q6ZV80 131 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 LINC00269Q8N2A0 174 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 MAPKAPK5-AS1Q8N8E1 139 aa6.62□□□□□ -1.35
RBFOX1-220ENST00000570188 TRAV8-3A0A0A6YYJ7 113 aa6.61□□□□□ -1.35
RBFOX1-220ENST00000570188 IGHV1-58A0A0C4DH39 117 aa6.61□□□□□ -1.35
RBFOX1-220ENST00000570188 MYMXA0A1B0GTQ4 84 aa6.61□□□□□ -1.35
RBFOX1-220ENST00000570188 ZNF815PA8K554 130 aa6.61□□□□□ -1.35
RBFOX1-220ENST00000570188 REG3AQ06141 175 aa6.61□□□□□ -1.35
RBFOX1-220ENST00000570188 MRPS16Q9Y3D3 137 aaKnown RBP6.61□□□□□ -1.35
RBFOX1-220ENST00000570188 COL7A1Q02388 2944 aa6.6□□□□□ -1.35
RBFOX1-220ENST00000570188 PRKDCP78527 4128 aaKnown RBP6.6□□□□□ -1.35
RBFOX1-220ENST00000570188 SIVA1O15304 175 aa6.6□□□□□ -1.35
RBFOX1-220ENST00000570188 CCL25O15444 150 aa6.6□□□□□ -1.35
RBFOX1-220ENST00000570188 CRPP02741 224 aa6.6□□□□□ -1.35
RBFOX1-220ENST00000570188 KRTAP19-1Q8IUB9 90 aa6.6□□□□□ -1.35
RBFOX1-220ENST00000570188 KLK12Q9UKR0 248 aa6.6□□□□□ -1.35
RBFOX1-220ENST00000570188 DYNC2H1Q8NCM8 4307 aaKnown RBP6.59□□□□□ -1.35
RBFOX1-220ENST00000570188 SMIM1B2RUZ4 78 aa6.59□□□□□ -1.35
RBFOX1-220ENST00000570188 USP17L23D6RBM5 183 aa6.59□□□□□ -1.35
RBFOX1-220ENST00000570188 XCL1P47992 114 aa6.59□□□□□ -1.35
RBFOX1-220ENST00000570188 CCL18P55774 89 aa6.59□□□□□ -1.35
RBFOX1-220ENST00000570188 HIGD1BQ9P298 99 aa6.59□□□□□ -1.35
RBFOX1-220ENST00000570188 LINC00588Q9Y4M8 146 aa6.59□□□□□ -1.35
RBFOX1-220ENST00000570188 IGLV10-54A0A075B6I4 117 aa6.58□□□□□ -1.36
RBFOX1-220ENST00000570188 IGHV3OR16-9A0A0B4J2B5 98 aa6.58□□□□□ -1.36
RBFOX1-220ENST00000570188 NUPR2A6NF83 97 aa6.58□□□□□ -1.36
RBFOX1-220ENST00000570188 M0R143 59 aa6.58□□□□□ -1.36
RBFOX1-220ENST00000570188 BATFQ16520 125 aa6.58□□□□□ -1.36
RBFOX1-220ENST00000570188 LINC01556Q5JQF7 62 aa6.58□□□□□ -1.36
RBFOX1-220ENST00000570188 SCGB1D4Q6XE38 83 aa6.58□□□□□ -1.36
RBFOX1-220ENST00000570188 C5orf38Q86SI9 138 aa6.58□□□□□ -1.36
RBFOX1-220ENST00000570188 CHCHD10Q8WYQ3 142 aaPredicted RBP6.58□□□□□ -1.36
RBFOX1-220ENST00000570188 STAB2Q8WWQ8 2551 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 A0A087WZ39 114 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 IGLV5-39A0A0G2JS06 123 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 HINT1P49773 126 aaPredicted RBP6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 HSD52Q0P140 79 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 ZFAND6Q6FIF0 208 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 CD164L2Q6UWJ8 174 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 UBE2WQ96B02 151 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 SNHG12Q9BXW3 62 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 PRR34Q9NV39 138 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 NDUFA12Q9UI09 145 aa6.57□□□□□ -1.36
RBFOX1-220ENST00000570188 DNAH10OSP0CZ25 163 aa6.56□□□□□ -1.36
RBFOX1-220ENST00000570188 ENHOQ6UWT2 76 aa6.56□□□□□ -1.36
RBFOX1-220ENST00000570188 APLNQ9ULZ1 77 aa6.56□□□□□ -1.36
RBFOX1-220ENST00000570188 KLK5Q9Y337 293 aaPredicted RBP6.56□□□□□ -1.36
RBFOX1-220ENST00000570188 MEGF8Q7Z7M0 2845 aa6.55□□□□□ -1.36
RBFOX1-220ENST00000570188 TRAV8-4A0A0B4J246 113 aa6.55□□□□□ -1.36
RBFOX1-220ENST00000570188 COX7A2LO14548 114 aa6.55□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms