RNA–Protein interactions for RNA: ENST00000568219.5

PALB2-206, Transcript of partner and localizer of BRCA2, humanhuman

TSL 1 (best) BASIC

Gene PALB2, Length 3,963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PALB2-206ENST00000568219 B4DSR2 109 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 K7EMT4 169 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 RPL18AQ02543 176 aaKnown RBP7.95□□□□□ -1.14
PALB2-206ENST00000568219 KIR2DL5BQ8NHK3 375 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 ACANP16112 2415 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 IGHV4-30-2A0A087WSY4 118 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 A0A1W2PPR1 153 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 GNLYP22749 145 aa7.95□□□□□ -1.14
PALB2-206ENST00000568219 CITED2Q99967 270 aaPredicted RBP7.94□□□□□ -1.14
PALB2-206ENST00000568219 IGLV10-54A0A075B6I4 117 aa7.94□□□□□ -1.14
PALB2-206ENST00000568219 LINC00242Q5T6M2 205 aa7.94□□□□□ -1.14
PALB2-206ENST00000568219 TRBV7-7A0A0K0K1E9 115 aa7.94□□□□□ -1.14
PALB2-206ENST00000568219 H0YGX0 51 aa7.94□□□□□ -1.14
PALB2-206ENST00000568219 H3BUA1 57 aa7.94□□□□□ -1.14
PALB2-206ENST00000568219 Q6ZTI0 123 aa7.94□□□□□ -1.14
PALB2-206ENST00000568219 ZNF462Q96JM2 2506 aa7.93□□□□□ -1.14
PALB2-206ENST00000568219 SERP2Q8N6R1 65 aa7.93□□□□□ -1.14
PALB2-206ENST00000568219 SMIM11BQ8TCY0 68 aa7.93□□□□□ -1.14
PALB2-206ENST00000568219 SMCR5Q8TEV8 140 aa7.93□□□□□ -1.14
PALB2-206ENST00000568219 CXCL5P42830 114 aa7.93□□□□□ -1.14
PALB2-206ENST00000568219 A0A087WYN8 130 aa7.92□□□□□ -1.14
PALB2-206ENST00000568219 PKIGQ9Y2B9 76 aa7.92□□□□□ -1.14
PALB2-206ENST00000568219 FAM218AQ96MZ4 157 aa7.92□□□□□ -1.14
PALB2-206ENST00000568219 CHCHD7Q9BUK0 85 aa7.92□□□□□ -1.14
PALB2-206ENST00000568219 LINC00846Q9NV44 126 aa7.92□□□□□ -1.14
PALB2-206ENST00000568219 PSMB8P28062 276 aa7.91□□□□□ -1.14
PALB2-206ENST00000568219 C11orf71Q6IPW1 123 aa7.91□□□□□ -1.14
PALB2-206ENST00000568219 MRAPQ8TCY5 172 aa7.91□□□□□ -1.14
PALB2-206ENST00000568219 A6NDX4 124 aa7.91□□□□□ -1.14
PALB2-206ENST00000568219 HILS1P60008 231 aa7.91□□□□□ -1.14
PALB2-206ENST00000568219 LITAFQ99732 161 aa7.91□□□□□ -1.14
PALB2-206ENST00000568219 LRRC75A-AS1Q8N1F1 130 aa7.9□□□□□ -1.14
PALB2-206ENST00000568219 ESM1Q9NQ30 184 aa7.9□□□□□ -1.14
PALB2-206ENST00000568219 SNURFQ9Y675 71 aa7.9□□□□□ -1.14
PALB2-206ENST00000568219 SPENQ96T58 3664 aaKnown RBP7.9□□□□□ -1.14
PALB2-206ENST00000568219 RELNP78509 3460 aa7.9□□□□□ -1.14
PALB2-206ENST00000568219 UCNP55089 124 aa7.9□□□□□ -1.14
PALB2-206ENST00000568219 DAD1P61803 113 aa7.9□□□□□ -1.14
PALB2-206ENST00000568219 SOSTDC1Q6X4U4 206 aa7.9□□□□□ -1.14
PALB2-206ENST00000568219 SCXQ7RTU7 201 aa7.9□□□□□ -1.14
PALB2-206ENST00000568219 SMIM1B2RUZ4 78 aa7.9□□□□□ -1.15
PALB2-206ENST00000568219 K7EQD1 137 aa7.9□□□□□ -1.15
PALB2-206ENST00000568219 NBL1P41271 181 aa7.9□□□□□ -1.15
PALB2-206ENST00000568219 PRR3P79522 188 aaKnown RBP7.9□□□□□ -1.15
PALB2-206ENST00000568219 F5H768 121 aa7.89□□□□□ -1.15
PALB2-206ENST00000568219 TIMM17BO60830 172 aa7.89□□□□□ -1.15
PALB2-206ENST00000568219 PRB2P02812 416 aaPredicted RBP7.89□□□□□ -1.15
PALB2-206ENST00000568219 SS18Q15532 418 aa7.89□□□□□ -1.15
PALB2-206ENST00000568219 C18orf65Q6ZTR6 163 aa7.89□□□□□ -1.15
PALB2-206ENST00000568219 SVEP1Q4LDE5 3571 aa7.89□□□□□ -1.15
PALB2-206ENST00000568219 ZNF292O60281 2723 aa7.89□□□□□ -1.15
PALB2-206ENST00000568219 C4orf26Q17RF5 130 aa7.89□□□□□ -1.15
PALB2-206ENST00000568219 F8P00451 2351 aa7.89□□□□□ -1.15
PALB2-206ENST00000568219 LOC100131303A0A0U1RQF7 123 aa7.88□□□□□ -1.15
PALB2-206ENST00000568219 A0A0U1RQV1 116 aa7.88□□□□□ -1.15
PALB2-206ENST00000568219 WFDC11Q8NEX6 87 aa7.88□□□□□ -1.15
PALB2-206ENST00000568219 UPK3BQ9BT76 320 aa7.88□□□□□ -1.15
PALB2-206ENST00000568219 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP7.88□□□□□ -1.15
PALB2-206ENST00000568219 FBXL19-AS1Q494R0 122 aa7.87□□□□□ -1.15
PALB2-206ENST00000568219 FAM19A1Q7Z5A9 133 aa7.87□□□□□ -1.15
PALB2-206ENST00000568219 CCL18P55774 89 aa7.87□□□□□ -1.15
PALB2-206ENST00000568219 TMEM258P61165 79 aa7.87□□□□□ -1.15
PALB2-206ENST00000568219 LINC00337Q8N6G1 96 aa7.87□□□□□ -1.15
PALB2-206ENST00000568219 C19orf84I3L1E1 186 aa7.87□□□□□ -1.15
PALB2-206ENST00000568219 BRI3O95415 125 aa7.87□□□□□ -1.15
PALB2-206ENST00000568219 CUBNO60494 3623 aa7.86□□□□□ -1.15
PALB2-206ENST00000568219 AVPP01185 164 aa7.86□□□□□ -1.15
PALB2-206ENST00000568219 PF4P02776 101 aa7.86□□□□□ -1.15
PALB2-206ENST00000568219 BRK1Q8WUW1 75 aa7.86□□□□□ -1.15
PALB2-206ENST00000568219 FAM19A4Q96LR4 140 aa7.86□□□□□ -1.15
PALB2-206ENST00000568219 PRO3102Q9H379 93 aa7.86□□□□□ -1.15
PALB2-206ENST00000568219 MAP6D1Q9H9H5 199 aa7.85□□□□□ -1.15
PALB2-206ENST00000568219 TRAV25A0A0B4J276 109 aa7.85□□□□□ -1.15
PALB2-206ENST00000568219 ANGP03950 147 aaKnown RBP7.85□□□□□ -1.15
PALB2-206ENST00000568219 MPLKIPQ8TAP9 179 aa7.85□□□□□ -1.15
PALB2-206ENST00000568219 ANKRD17O75179 2603 aaKnown RBP7.84□□□□□ -1.15
PALB2-206ENST00000568219 FAM236DA0A1B0GTK5 79 aa7.84□□□□□ -1.15
PALB2-206ENST00000568219 FAM236CP0DP71 79 aa7.84□□□□□ -1.15
PALB2-206ENST00000568219 CHD6Q8TD26 2715 aa7.84□□□□□ -1.15
PALB2-206ENST00000568219 IGLV1-40P01703 118 aa7.84□□□□□ -1.16
PALB2-206ENST00000568219 JMJD7-PLA2G4BH0Y9G9 81 aa7.83□□□□□ -1.16
PALB2-206ENST00000568219 CDC42SE2Q9NRR3 84 aa7.83□□□□□ -1.16
PALB2-206ENST00000568219 COL27A1Q8IZC6 1860 aaPredicted RBP7.83□□□□□ -1.16
PALB2-206ENST00000568219 C6orf99Q4VX62 202 aa7.83□□□□□ -1.16
PALB2-206ENST00000568219 DPH3Q96FX2 82 aa7.83□□□□□ -1.16
PALB2-206ENST00000568219 ITPR1Q14643 2758 aa7.83□□□□□ -1.16
PALB2-206ENST00000568219 TMEM256-PLSCR3K7ERE1 68 aa7.82□□□□□ -1.16
PALB2-206ENST00000568219 RPL28P46779 137 aaKnown RBP7.82□□□□□ -1.16
PALB2-206ENST00000568219 LINC01356Q8N9X3 169 aa7.82□□□□□ -1.16
PALB2-206ENST00000568219 GYPEP15421 78 aa7.81□□□□□ -1.16
PALB2-206ENST00000568219 A8MTW9 85 aa7.81□□□□□ -1.16
PALB2-206ENST00000568219 CRYGAP11844 174 aa7.81□□□□□ -1.16
PALB2-206ENST00000568219 PLA2G2AP14555 144 aa7.81□□□□□ -1.16
PALB2-206ENST00000568219 Q6JHZ5 121 aa7.81□□□□□ -1.16
PALB2-206ENST00000568219 LINC00269Q8N2A0 174 aa7.81□□□□□ -1.16
PALB2-206ENST00000568219 NBEAL2Q6ZNJ1 2754 aa7.8□□□□□ -1.16
PALB2-206ENST00000568219 C9orf129Q5T035 196 aaKnown RBP7.8□□□□□ -1.16
PALB2-206ENST00000568219 IGHV4-28A0A0C4DH34 117 aa7.8□□□□□ -1.16
PALB2-206ENST00000568219 DEFB4AO15263 64 aa7.8□□□□□ -1.16
PALB2-206ENST00000568219 WFDC10AQ9H1F0 79 aa7.8□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms