RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 IGIPA6NJ69 53 aa8.39□□□□□ -1.07
CNOT1-213ENST00000568158 IFITM10A6NMD0 228 aa8.39□□□□□ -1.07
CNOT1-213ENST00000568158 CNBPP62633 177 aaKnown RBP8.39□□□□□ -1.07
CNOT1-213ENST00000568158 Q6ZSA8 131 aa8.39□□□□□ -1.07
CNOT1-213ENST00000568158 LINC00528Q8N1L1 170 aa8.39□□□□□ -1.07
CNOT1-213ENST00000568158 Q8N1X5 172 aa8.39□□□□□ -1.07
CNOT1-213ENST00000568158 TMEM141Q96I45 108 aa8.39□□□□□ -1.07
CNOT1-213ENST00000568158 SMCO4Q9NRQ5 59 aa8.39□□□□□ -1.07
CNOT1-213ENST00000568158 LINC01546A6NGU7 62 aa8.38□□□□□ -1.07
CNOT1-213ENST00000568158 COX7A2LO14548 114 aa8.38□□□□□ -1.07
CNOT1-213ENST00000568158 COX6A2Q02221 97 aa8.38□□□□□ -1.07
CNOT1-213ENST00000568158 SDIM1Q6ZPB5 146 aa8.38□□□□□ -1.07
CNOT1-213ENST00000568158 TOMM6Q96B49 74 aa8.38□□□□□ -1.07
CNOT1-213ENST00000568158 KRTAP9-9Q9BYP9 154 aa8.38□□□□□ -1.07
CNOT1-213ENST00000568158 KRTAP9-4Q9BYQ2 154 aa8.38□□□□□ -1.07
CNOT1-213ENST00000568158 GVQW2A0A096LPI5 108 aaPredicted RBP8.37□□□□□ -1.07
CNOT1-213ENST00000568158 MALP21145 153 aa8.37□□□□□ -1.07
CNOT1-213ENST00000568158 G0S2P27469 103 aa8.37□□□□□ -1.07
CNOT1-213ENST00000568158 FA2HQ7L5A8 372 aa8.37□□□□□ -1.07
CNOT1-213ENST00000568158 C18orf32Q8TCD1 76 aa8.37□□□□□ -1.07
CNOT1-213ENST00000568158 URB1-AS1Q96HZ7 61 aa8.37□□□□□ -1.07
CNOT1-213ENST00000568158 VCX2Q9H322 139 aa8.37□□□□□ -1.07
CNOT1-213ENST00000568158 TRAV16A0A0A6YYK6 109 aaPredicted RBP8.36□□□□□ -1.07
CNOT1-213ENST00000568158 LINC00242Q5T6M2 205 aa8.36□□□□□ -1.07
CNOT1-213ENST00000568158 TEX43Q6ZNM6 134 aa8.36□□□□□ -1.07
CNOT1-213ENST00000568158 LINC00173Q6ZV60 143 aa8.36□□□□□ -1.07
CNOT1-213ENST00000568158 SCGB3A1Q96QR1 104 aa8.36□□□□□ -1.07
CNOT1-213ENST00000568158 AMELXQ99217 191 aa8.36□□□□□ -1.07
CNOT1-213ENST00000568158 IGHV3-64A0A075B6Q5 118 aa8.35□□□□□ -1.07
CNOT1-213ENST00000568158 IGHV3OR16-9A0A0B4J2B5 98 aa8.35□□□□□ -1.07
CNOT1-213ENST00000568158 LINC00614P0C842 121 aa8.35□□□□□ -1.07
CNOT1-213ENST00000568158 UBE2D1P51668 147 aa8.35□□□□□ -1.07
CNOT1-213ENST00000568158 IGLV4-69A0A075B6H9 119 aa8.34□□□□□ -1.07
CNOT1-213ENST00000568158 PANO1I0J062 215 aa8.34□□□□□ -1.07
CNOT1-213ENST00000568158 ZNF561-AS1K7EIQ3 104 aa8.34□□□□□ -1.07
CNOT1-213ENST00000568158 Q6ZN92 141 aa8.34□□□□□ -1.07
CNOT1-213ENST00000568158 SCXQ7RTU7 201 aa8.34□□□□□ -1.07
CNOT1-213ENST00000568158 ERASQ7Z444 233 aa8.34□□□□□ -1.07
CNOT1-213ENST00000568158 CIRBP-AS1Q8TBR5 109 aa8.34□□□□□ -1.07
CNOT1-213ENST00000568158 TIMM17AQ99595 171 aa8.34□□□□□ -1.07
CNOT1-213ENST00000568158 CHAC1Q9BUX1 264 aa8.34□□□□□ -1.07
CNOT1-213ENST00000568158 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP8.34□□□□□ -1.07
CNOT1-213ENST00000568158 APOMO95445 188 aa8.33□□□□□ -1.08
CNOT1-213ENST00000568158 NPSP0C0P6 89 aa8.33□□□□□ -1.08
CNOT1-213ENST00000568158 C2orf88Q9BSF0 95 aa8.33□□□□□ -1.08
CNOT1-213ENST00000568158 EPM2AB3EWF7 344 aa8.32□□□□□ -1.08
CNOT1-213ENST00000568158 CHTF8P0CG12 524 aa8.32□□□□□ -1.08
CNOT1-213ENST00000568158 SYCNQ0VAF6 134 aa8.32□□□□□ -1.08
CNOT1-213ENST00000568158 DPH3Q96FX2 82 aa8.32□□□□□ -1.08
CNOT1-213ENST00000568158 FAT1Q14517 4588 aa8.31□□□□□ -1.08
CNOT1-213ENST00000568158 A0A096LNJ9 63 aa8.31□□□□□ -1.08
CNOT1-213ENST00000568158 COLCA2A8K830 154 aa8.31□□□□□ -1.08
CNOT1-213ENST00000568158 TRGC2P03986 189 aa8.31□□□□□ -1.08
CNOT1-213ENST00000568158 PMCHL1Q16048 86 aa8.31□□□□□ -1.08
CNOT1-213ENST00000568158 Q6ZRU5 148 aa8.31□□□□□ -1.08
CNOT1-213ENST00000568158 ORAOV1Q8WV07 137 aa8.31□□□□□ -1.08
CNOT1-213ENST00000568158 A0A087WZ39 114 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 KRTAP4-8A0A0G2JLE6 195 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 A0A0J9YXV3 536 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 SCO1O75880 301 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 RAB5BP61020 215 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 SPAG11BQ08648 103 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 PAPPA-AS1Q5QFB9 102 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 Q5VSD8 79 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 FAM19A3Q7Z5A8 133 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 CARD19Q96LW7 228 aa8.3□□□□□ -1.08
CNOT1-213ENST00000568158 LINC01549A6NIU2 74 aa8.29□□□□□ -1.08
CNOT1-213ENST00000568158 FAM229AH3BQW9 127 aa8.29□□□□□ -1.08
CNOT1-213ENST00000568158 C2orf48Q96LS8 159 aa8.29□□□□□ -1.08
CNOT1-213ENST00000568158 CAMK2N2Q96S95 79 aa8.29□□□□□ -1.08
CNOT1-213ENST00000568158 OR10D4PQ8NGN7 298 aa8.28□□□□□ -1.08
CNOT1-213ENST00000568158 CST9LQ9H4G1 147 aa8.28□□□□□ -1.08
CNOT1-213ENST00000568158 VPS13BQ7Z7G8 4022 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 A0A087WYN8 130 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 A0A096LNI7 61 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 IGKV2-24A0A0C4DH68 120 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.27□□□□□ -1.09
CNOT1-213ENST00000568158 HBDP02042 147 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 NDUFA6P56556 154 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 CIRBPQ14011 172 aaKnown RBP8.27□□□□□ -1.09
CNOT1-213ENST00000568158 KIAA0087Q14695 138 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 MAJINQ3KP22 176 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 PDZD11Q5EBL8 140 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 C10orf25Q5T742 122 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 UNQ6190/PRO20217Q6UXQ8 127 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 CDKN2A-AS1Q9UH64 79 aa8.27□□□□□ -1.09
CNOT1-213ENST00000568158 ABCA13Q86UQ4 5058 aa8.26□□□□□ -1.09
CNOT1-213ENST00000568158 HERVK_113P63121 156 aa8.26□□□□□ -1.09
CNOT1-213ENST00000568158 SEC11AP67812 179 aa8.26□□□□□ -1.09
CNOT1-213ENST00000568158 PMVKQ15126 192 aa8.26□□□□□ -1.09
CNOT1-213ENST00000568158 LINC01561Q8N1V8 128 aa8.26□□□□□ -1.09
CNOT1-213ENST00000568158 SPACA4Q8TDM5 124 aa8.26□□□□□ -1.09
CNOT1-213ENST00000568158 GEMIN7Q9H840 131 aaKnown RBP8.26□□□□□ -1.09
CNOT1-213ENST00000568158 BAGE3Q86Y29 109 aa8.25□□□□□ -1.09
CNOT1-213ENST00000568158 CHCHD1Q96BP2 118 aaKnown RBP8.25□□□□□ -1.09
CNOT1-213ENST00000568158 TINCRA0A1B0GVN0 87 aa8.24□□□□□ -1.09
CNOT1-213ENST00000568158 NDUFA1O15239 70 aa8.24□□□□□ -1.09
CNOT1-213ENST00000568158 GAGE2BQ13066 116 aa8.24□□□□□ -1.09
CNOT1-213ENST00000568158 C2orf82Q6UX34 121 aa8.24□□□□□ -1.09
CNOT1-213ENST00000568158 TOMM7Q9P0U1 55 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.2 ms