RNA–Protein interactions for RNA: ENST00000568038.1

SMG1-214, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 2

Gene SMG1, Length 1,210 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-214ENST00000568038 FAM104AQ969W3 186 aa5.19□□□□□ -1.58
SMG1-214ENST00000568038 TMEM141Q96I45 108 aa5.19□□□□□ -1.58
SMG1-214ENST00000568038 TIMM17AQ99595 171 aa5.19□□□□□ -1.58
SMG1-214ENST00000568038 TRAV13-1A0A0B4J241 112 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP5.18□□□□□ -1.58
SMG1-214ENST00000568038 K7EP13 123 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 ATP5LO75964 103 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 LEPROTL1O95214 131 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 MRPS36P82909 103 aaKnown RBP5.18□□□□□ -1.58
SMG1-214ENST00000568038 Q6ZN92 141 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 TEX43Q6ZNM6 134 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 Q6ZR54 194 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 LINC00173Q6ZV60 143 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 VCX2Q9H322 139 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 STARD9Q9P2P6 4700 aa5.18□□□□□ -1.58
SMG1-214ENST00000568038 IGLV10-54A0A075B6I4 117 aa5.17□□□□□ -1.58
SMG1-214ENST00000568038 IGKV2D-30A0A075B6S6 120 aa5.17□□□□□ -1.58
SMG1-214ENST00000568038 TRAV8-3A0A0A6YYJ7 113 aa5.17□□□□□ -1.58
SMG1-214ENST00000568038 LINC00959A0A1B0GUT2 108 aa5.17□□□□□ -1.58
SMG1-214ENST00000568038 IFITM10A6NMD0 228 aa5.17□□□□□ -1.58
SMG1-214ENST00000568038 SNRPEP62304 92 aaKnown RBP5.17□□□□□ -1.58
SMG1-214ENST00000568038 PAPPA-AS1Q5QFB9 102 aa5.17□□□□□ -1.58
SMG1-214ENST00000568038 IFI27L1Q96BM0 104 aa5.17□□□□□ -1.58
SMG1-214ENST00000568038 PRR34Q9NV39 138 aa5.17□□□□□ -1.58
SMG1-214ENST00000568038 IGKV2D-24A0A075B6R9 120 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 H0Y8G0 127 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 PRSS1P07477 247 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 S100A2P29034 98 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 SS18Q15532 418 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 MIAQ16674 131 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 C1orf134Q5TEV5 83 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 BAALCQ8WXS3 180 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 AMELXQ99217 191 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 C2orf88Q9BSF0 95 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 HSPB8Q9UJY1 196 aa5.16□□□□□ -1.58
SMG1-214ENST00000568038 DNAH7Q8WXX0 4024 aa5.15□□□□□ -1.58
SMG1-214ENST00000568038 CSMD3Q7Z407 3707 aa5.15□□□□□ -1.58
SMG1-214ENST00000568038 CCL25O15444 150 aa5.15□□□□□ -1.59
SMG1-214ENST00000568038 XCL1P47992 114 aa5.15□□□□□ -1.59
SMG1-214ENST00000568038 PMVKQ15126 192 aa5.15□□□□□ -1.59
SMG1-214ENST00000568038 HIST3H2BBQ8N257 126 aa5.15□□□□□ -1.59
SMG1-214ENST00000568038 C6orf223Q8N319 242 aa5.15□□□□□ -1.59
SMG1-214ENST00000568038 CHCHD10Q8WYQ3 142 aaPredicted RBP5.15□□□□□ -1.59
SMG1-214ENST00000568038 RMI2Q96E14 147 aa5.15□□□□□ -1.59
SMG1-214ENST00000568038 CST9LQ9H4G1 147 aa5.15□□□□□ -1.59
SMG1-214ENST00000568038 TENM2Q9NT68 2774 aa5.14□□□□□ -1.59
SMG1-214ENST00000568038 TRAV8-4A0A0B4J246 113 aa5.14□□□□□ -1.59
SMG1-214ENST00000568038 C5orf52A6NGY3 159 aa5.14□□□□□ -1.59
SMG1-214ENST00000568038 PSCAO43653 123 aa5.14□□□□□ -1.59
SMG1-214ENST00000568038 UBE2D1P51668 147 aa5.14□□□□□ -1.59
SMG1-214ENST00000568038 NFE4Q86UQ8 179 aa5.14□□□□□ -1.59
SMG1-214ENST00000568038 TM2D2Q9BX73 214 aa5.14□□□□□ -1.59
SMG1-214ENST00000568038 A0A0J9YXV3 536 aa5.13□□□□□ -1.59
SMG1-214ENST00000568038 KRTDAPP60985 99 aa5.13□□□□□ -1.59
SMG1-214ENST00000568038 COX6A2Q02221 97 aa5.13□□□□□ -1.59
SMG1-214ENST00000568038 LINC00242Q5T6M2 205 aa5.13□□□□□ -1.59
SMG1-214ENST00000568038 KRTAP26-1Q6PEX3 210 aa5.13□□□□□ -1.59
SMG1-214ENST00000568038 PACRGQ96M98 296 aaPredicted RBP5.13□□□□□ -1.59
SMG1-214ENST00000568038 HIST1H2BLQ99880 126 aa5.13□□□□□ -1.59
SMG1-214ENST00000568038 MAP1LC3CQ9BXW4 147 aa5.13□□□□□ -1.59
SMG1-214ENST00000568038 DYNC2H1Q8NCM8 4307 aaKnown RBP5.13□□□□□ -1.59
SMG1-214ENST00000568038 TRAV12-1A0A0B4J245 112 aa5.12□□□□□ -1.59
SMG1-214ENST00000568038 C3orf79P0CE67 100 aa5.12□□□□□ -1.59
SMG1-214ENST00000568038 CFAP161Q6P656 301 aa5.12□□□□□ -1.59
SMG1-214ENST00000568038 CD164L2Q6UWJ8 174 aa5.12□□□□□ -1.59
SMG1-214ENST00000568038 Q6ZRN7 208 aaPredicted RBP5.12□□□□□ -1.59
SMG1-214ENST00000568038 C5orf38Q86SI9 138 aa5.12□□□□□ -1.59
SMG1-214ENST00000568038 MAPKAPK5-AS1Q8N8E1 139 aa5.12□□□□□ -1.59
SMG1-214ENST00000568038 PMCHL2Q9BQD1 86 aa5.12□□□□□ -1.59
SMG1-214ENST00000568038 GEMIN7Q9H840 131 aaKnown RBP5.12□□□□□ -1.59
SMG1-214ENST00000568038 CHTOPQ9Y3Y2 248 aaKnown RBP5.12□□□□□ -1.59
SMG1-214ENST00000568038 IGLV4-69A0A075B6H9 119 aa5.11□□□□□ -1.59
SMG1-214ENST00000568038 TINCRA0A1B0GVN0 87 aa5.11□□□□□ -1.59
SMG1-214ENST00000568038 SYS1-DBNDD2H3BUS1 97 aa5.11□□□□□ -1.59
SMG1-214ENST00000568038 LECT2O14960 151 aa5.11□□□□□ -1.59
SMG1-214ENST00000568038 RTL8CO15255 209 aa5.11□□□□□ -1.59
SMG1-214ENST00000568038 SEC11AP67812 179 aa5.11□□□□□ -1.59
SMG1-214ENST00000568038 SPATA12Q7Z6I5 190 aa5.11□□□□□ -1.59
SMG1-214ENST00000568038 MRPL35Q9NZE8 188 aaKnown RBP5.11□□□□□ -1.59
SMG1-214ENST00000568038 PLECQ15149 4684 aaKnown RBP5.11□□□□□ -1.59
SMG1-214ENST00000568038 IGHV3OR16-9A0A0B4J2B5 98 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 C11orf86A6NJI1 115 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 F8VRH5 84 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 COX7A2LO14548 114 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 IGLC3P0DOY3 106 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 HERVK_113P63121 156 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 PET117Q6UWS5 81 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 FAM19A3Q7Z5A8 133 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 LINC00469Q8N7U9 141 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 OR10D4PQ8NGN7 298 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 CHAC1Q9BUX1 264 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 CDKN2A-AS1Q9UH64 79 aa5.1□□□□□ -1.59
SMG1-214ENST00000568038 USP17L23D6RBM5 183 aa5.09□□□□□ -1.59
SMG1-214ENST00000568038 PCP4P48539 62 aa5.09□□□□□ -1.59
SMG1-214ENST00000568038 WFDC2Q14508 124 aa5.09□□□□□ -1.59
SMG1-214ENST00000568038 TMEM170BQ5T4T1 132 aa5.09□□□□□ -1.59
SMG1-214ENST00000568038 IGLV5-45A0A087WSX0 123 aa5.08□□□□□ -1.6
SMG1-214ENST00000568038 A0A087WZ39 114 aa5.08□□□□□ -1.6
SMG1-214ENST00000568038 LRCOL1A6NCL2 159 aa5.08□□□□□ -1.6
SMG1-214ENST00000568038 DPM2O94777 84 aa5.08□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms