RNA–Protein interactions for RNA: ENST00000567720.5

COMMD4-220, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-220ENST00000567720 IGHV3OR16-9A0A0B4J2B5 98 aa11.13□□□□□ -0.63
COMMD4-220ENST00000567720 TRGC2P03986 189 aa11.13□□□□□ -0.63
COMMD4-220ENST00000567720 XGP55808 180 aa11.13□□□□□ -0.63
COMMD4-220ENST00000567720 LINC00242Q5T6M2 205 aa11.13□□□□□ -0.63
COMMD4-220ENST00000567720 ERASQ7Z444 233 aa11.13□□□□□ -0.63
COMMD4-220ENST00000567720 C5orf38Q86SI9 138 aa11.13□□□□□ -0.63
COMMD4-220ENST00000567720 C2orf88Q9BSF0 95 aa11.13□□□□□ -0.63
COMMD4-220ENST00000567720 LINC00614P0C842 121 aa11.12□□□□□ -0.63
COMMD4-220ENST00000567720 PMCHL1Q16048 86 aa11.12□□□□□ -0.63
COMMD4-220ENST00000567720 C9orf163Q8N9P6 203 aa11.12□□□□□ -0.63
COMMD4-220ENST00000567720 LINC00526Q96FQ7 95 aa11.12□□□□□ -0.63
COMMD4-220ENST00000567720 SCGB3A1Q96QR1 104 aa11.12□□□□□ -0.63
COMMD4-220ENST00000567720 KRTAP17-1Q9BYP8 105 aa11.12□□□□□ -0.63
COMMD4-220ENST00000567720 VCX2Q9H322 139 aa11.11□□□□□ -0.63
COMMD4-220ENST00000567720 LINC01549A6NIU2 74 aa11.1□□□□□ -0.63
COMMD4-220ENST00000567720 HBDP02042 147 aa11.1□□□□□ -0.63
COMMD4-220ENST00000567720 MALP21145 153 aa11.1□□□□□ -0.63
COMMD4-220ENST00000567720 COX6A2Q02221 97 aa11.1□□□□□ -0.63
COMMD4-220ENST00000567720 PAPPA-AS1Q5QFB9 102 aa11.1□□□□□ -0.63
COMMD4-220ENST00000567720 RAB5BP61020 215 aa11.09□□□□□ -0.63
COMMD4-220ENST00000567720 FAM19A3Q7Z5A8 133 aa11.09□□□□□ -0.63
COMMD4-220ENST00000567720 ABCA13Q86UQ4 5058 aa11.08□□□□□ -0.64
COMMD4-220ENST00000567720 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.08□□□□□ -0.64
COMMD4-220ENST00000567720 SPAG11BQ08648 103 aa11.07□□□□□ -0.64
COMMD4-220ENST00000567720 PDZD11Q5EBL8 140 aa11.07□□□□□ -0.64
COMMD4-220ENST00000567720 IGLV4-69A0A075B6H9 119 aa11.06□□□□□ -0.64
COMMD4-220ENST00000567720 IGHV3-64A0A075B6Q5 118 aa11.06□□□□□ -0.64
COMMD4-220ENST00000567720 A0A087WZ39 114 aa11.06□□□□□ -0.64
COMMD4-220ENST00000567720 ZNF561-AS1K7EIQ3 104 aa11.06□□□□□ -0.64
COMMD4-220ENST00000567720 APOMO95445 188 aa11.06□□□□□ -0.64
COMMD4-220ENST00000567720 LINC00310P59036 64 aa11.06□□□□□ -0.64
COMMD4-220ENST00000567720 OR10D4PQ8NGN7 298 aa11.06□□□□□ -0.64
COMMD4-220ENST00000567720 ORAOV1Q8WV07 137 aa11.06□□□□□ -0.64
COMMD4-220ENST00000567720 CHCHD1Q96BP2 118 aaKnown RBP11.06□□□□□ -0.64
COMMD4-220ENST00000567720 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.05□□□□□ -0.64
COMMD4-220ENST00000567720 PANO1I0J062 215 aa11.05□□□□□ -0.64
COMMD4-220ENST00000567720 SDIM1Q6ZPB5 146 aa11.05□□□□□ -0.64
COMMD4-220ENST00000567720 SCXQ7RTU7 201 aa11.05□□□□□ -0.64
COMMD4-220ENST00000567720 CARD19Q96LW7 228 aa11.05□□□□□ -0.64
COMMD4-220ENST00000567720 A0A0J9YXV3 536 aa11.04□□□□□ -0.64
COMMD4-220ENST00000567720 ATP6V1G1O75348 118 aa11.04□□□□□ -0.64
COMMD4-220ENST00000567720 BAGE3Q86Y29 109 aa11.04□□□□□ -0.64
COMMD4-220ENST00000567720 CST9LQ9H4G1 147 aa11.04□□□□□ -0.64
COMMD4-220ENST00000567720 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.04□□□□□ -0.64
COMMD4-220ENST00000567720 VPS13BQ7Z7G8 4022 aa11.04□□□□□ -0.64
COMMD4-220ENST00000567720 HERVK_113P63121 156 aa11.03□□□□□ -0.64
COMMD4-220ENST00000567720 SYCNQ0VAF6 134 aa11.03□□□□□ -0.64
COMMD4-220ENST00000567720 PMVKQ15126 192 aa11.03□□□□□ -0.64
COMMD4-220ENST00000567720 Q6ZRU5 148 aa11.03□□□□□ -0.64
COMMD4-220ENST00000567720 PCLOQ9Y6V0 5065 aa11.03□□□□□ -0.64
COMMD4-220ENST00000567720 SERF1AO75920 110 aa11.02□□□□□ -0.65
COMMD4-220ENST00000567720 Q8N1X5 172 aa11.02□□□□□ -0.65
COMMD4-220ENST00000567720 C2orf48Q96LS8 159 aa11.02□□□□□ -0.65
COMMD4-220ENST00000567720 CHAC1Q9BUX1 264 aa11.02□□□□□ -0.65
COMMD4-220ENST00000567720 CDKN2A-AS1Q9UH64 79 aa11.02□□□□□ -0.65
COMMD4-220ENST00000567720 HSBP1O75506 76 aa11.01□□□□□ -0.65
COMMD4-220ENST00000567720 CHTF8P0CG12 524 aa11.01□□□□□ -0.65
COMMD4-220ENST00000567720 SEC11AP67812 179 aa11.01□□□□□ -0.65
COMMD4-220ENST00000567720 LINC01561Q8N1V8 128 aa11.01□□□□□ -0.65
COMMD4-220ENST00000567720 CAMK2N2Q96S95 79 aa11.01□□□□□ -0.65
COMMD4-220ENST00000567720 KRTAP4-5Q9BYR2 181 aa11.01□□□□□ -0.65
COMMD4-220ENST00000567720 IGLV5-45A0A087WSX0 123 aa11□□□□□ -0.65
COMMD4-220ENST00000567720 TINCRA0A1B0GVN0 87 aa11□□□□□ -0.65
COMMD4-220ENST00000567720 ATP5LO75964 103 aa11□□□□□ -0.65
COMMD4-220ENST00000567720 CIRBPQ14011 172 aaKnown RBP11□□□□□ -0.65
COMMD4-220ENST00000567720 KIAA0087Q14695 138 aa11□□□□□ -0.65
COMMD4-220ENST00000567720 FAM19A2Q8N3H0 131 aa11□□□□□ -0.65
COMMD4-220ENST00000567720 CIRBP-AS1Q8TBR5 109 aa11□□□□□ -0.65
COMMD4-220ENST00000567720 GEMIN7Q9H840 131 aaKnown RBP11□□□□□ -0.65
COMMD4-220ENST00000567720 SMR3BP02814 79 aaPredicted RBP10.99□□□□□ -0.65
COMMD4-220ENST00000567720 LINC00469Q8N7U9 141 aa10.99□□□□□ -0.65
COMMD4-220ENST00000567720 A0A096LNI7 61 aa10.98□□□□□ -0.65
COMMD4-220ENST00000567720 IGLC3P0DOY3 106 aa10.98□□□□□ -0.65
COMMD4-220ENST00000567720 SPACA4Q8TDM5 124 aa10.98□□□□□ -0.65
COMMD4-220ENST00000567720 SMIM1B2RUZ4 78 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 NUPR1O60356 82 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST1H2BKO60814 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST1H2BJP06899 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 S100A1P23297 94 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST1H2BOP23527 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST1H2BBP33778 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 NDUFA6P56556 154 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST1H2BDP58876 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST1H2BCP62807 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST2H2BEQ16778 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.97□□□□□ -0.65
COMMD4-220ENST00000567720 C10orf25Q5T742 122 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST1H2BHQ93079 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST1H2BNQ99877 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 HIST1H2BMQ99879 126 aa10.97□□□□□ -0.65
COMMD4-220ENST00000567720 IGKV2-24A0A0C4DH68 120 aa10.96□□□□□ -0.65
COMMD4-220ENST00000567720 NDUFA1O15239 70 aa10.96□□□□□ -0.65
COMMD4-220ENST00000567720 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.65
COMMD4-220ENST00000567720 PACRGQ96M98 296 aaPredicted RBP10.96□□□□□ -0.65
COMMD4-220ENST00000567720 Q5VSD8 79 aa10.95□□□□□ -0.66
COMMD4-220ENST00000567720 C2orf82Q6UX34 121 aa10.95□□□□□ -0.66
COMMD4-220ENST00000567720 MRPL35Q9NZE8 188 aaKnown RBP10.95□□□□□ -0.66
COMMD4-220ENST00000567720 F8WDY8 70 aa10.94□□□□□ -0.66
COMMD4-220ENST00000567720 ZNF22P17026 224 aaPredicted RBP10.94□□□□□ -0.66
COMMD4-220ENST00000567720 UNQ6190/PRO20217Q6UXQ8 127 aa10.94□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 70.3 ms