RNA–Protein interactions for RNA: ENST00000567365.2

RNF40-211, Transcript of ring finger protein 40, humanhuman

TSL 3

Gene RNF40, Length 597 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-211ENST00000567365 LINC00242Q5T6M2 205 aa8□□□□□ -1.13
RNF40-211ENST00000567365 ERASQ7Z444 233 aa8□□□□□ -1.13
RNF40-211ENST00000567365 FAM19A3Q7Z5A8 133 aa8□□□□□ -1.13
RNF40-211ENST00000567365 LINC01549A6NIU2 74 aa7.99□□□□□ -1.13
RNF40-211ENST00000567365 COX7A2LO14548 114 aa7.99□□□□□ -1.13
RNF40-211ENST00000567365 LINC00614P0C842 121 aa7.99□□□□□ -1.13
RNF40-211ENST00000567365 COX6A2Q02221 97 aa7.99□□□□□ -1.13
RNF40-211ENST00000567365 HIGD2BQ4VC39 106 aa7.99□□□□□ -1.13
RNF40-211ENST00000567365 SDIM1Q6ZPB5 146 aa7.99□□□□□ -1.13
RNF40-211ENST00000567365 FA2HQ7L5A8 372 aa7.99□□□□□ -1.13
RNF40-211ENST00000567365 AP5S1Q9NUS5 200 aa7.99□□□□□ -1.13
RNF40-211ENST00000567365 TEX43Q6ZNM6 134 aa7.98□□□□□ -1.13
RNF40-211ENST00000567365 C5orf38Q86SI9 138 aa7.98□□□□□ -1.13
RNF40-211ENST00000567365 TRGC2P03986 189 aa7.97□□□□□ -1.13
RNF40-211ENST00000567365 Q6ZN92 141 aa7.97□□□□□ -1.13
RNF40-211ENST00000567365 SCGB3A1Q96QR1 104 aa7.97□□□□□ -1.13
RNF40-211ENST00000567365 VCX2Q9H322 139 aa7.97□□□□□ -1.13
RNF40-211ENST00000567365 IGHV3-64A0A075B6Q5 118 aa7.96□□□□□ -1.14
RNF40-211ENST00000567365 A0A087WZ39 114 aa7.96□□□□□ -1.14
RNF40-211ENST00000567365 SCO1O75880 301 aa7.96□□□□□ -1.14
RNF40-211ENST00000567365 LINC00526Q96FQ7 95 aa7.96□□□□□ -1.14
RNF40-211ENST00000567365 C2orf88Q9BSF0 95 aa7.96□□□□□ -1.14
RNF40-211ENST00000567365 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.95□□□□□ -1.14
RNF40-211ENST00000567365 PANO1I0J062 215 aa7.95□□□□□ -1.14
RNF40-211ENST00000567365 RAB5BP61020 215 aa7.95□□□□□ -1.14
RNF40-211ENST00000567365 HAMPP81172 84 aa7.95□□□□□ -1.14
RNF40-211ENST00000567365 CIRBPQ14011 172 aaKnown RBP7.95□□□□□ -1.14
RNF40-211ENST00000567365 PDZD11Q5EBL8 140 aa7.95□□□□□ -1.14
RNF40-211ENST00000567365 PAPPA-AS1Q5QFB9 102 aa7.95□□□□□ -1.14
RNF40-211ENST00000567365 LINC01561Q8N1V8 128 aa7.95□□□□□ -1.14
RNF40-211ENST00000567365 Q8N1X5 172 aa7.95□□□□□ -1.14
RNF40-211ENST00000567365 CHAC1Q9BUX1 264 aa7.95□□□□□ -1.14
RNF40-211ENST00000567365 SRRM2Q9UQ35 2752 aaKnown RBP7.94□□□□□ -1.14
RNF40-211ENST00000567365 IGLV4-69A0A075B6H9 119 aa7.94□□□□□ -1.14
RNF40-211ENST00000567365 HBDP02042 147 aa7.94□□□□□ -1.14
RNF40-211ENST00000567365 MALP21145 153 aa7.94□□□□□ -1.14
RNF40-211ENST00000567365 LINC00310P59036 64 aa7.94□□□□□ -1.14
RNF40-211ENST00000567365 KIAA0087Q14695 138 aa7.94□□□□□ -1.14
RNF40-211ENST00000567365 SCXQ7RTU7 201 aa7.94□□□□□ -1.14
RNF40-211ENST00000567365 OR10D4PQ8NGN7 298 aa7.94□□□□□ -1.14
RNF40-211ENST00000567365 CHCHD1Q96BP2 118 aaKnown RBP7.94□□□□□ -1.14
RNF40-211ENST00000567365 C2orf48Q96LS8 159 aa7.94□□□□□ -1.14
RNF40-211ENST00000567365 CST9LQ9H4G1 147 aa7.94□□□□□ -1.14
RNF40-211ENST00000567365 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.94□□□□□ -1.14
RNF40-211ENST00000567365 APOMO95445 188 aa7.93□□□□□ -1.14
RNF40-211ENST00000567365 PMCHL1Q16048 86 aa7.93□□□□□ -1.14
RNF40-211ENST00000567365 IGLV5-45A0A087WSX0 123 aa7.92□□□□□ -1.14
RNF40-211ENST00000567365 A0A0J9YXV3 536 aa7.92□□□□□ -1.14
RNF40-211ENST00000567365 ZNF561-AS1K7EIQ3 104 aa7.92□□□□□ -1.14
RNF40-211ENST00000567365 SPAG11BQ08648 103 aa7.92□□□□□ -1.14
RNF40-211ENST00000567365 SYCNQ0VAF6 134 aa7.92□□□□□ -1.14
RNF40-211ENST00000567365 PMVKQ15126 192 aa7.92□□□□□ -1.14
RNF40-211ENST00000567365 Q6ZRU5 148 aa7.92□□□□□ -1.14
RNF40-211ENST00000567365 CIRBP-AS1Q8TBR5 109 aa7.92□□□□□ -1.14
RNF40-211ENST00000567365 TINCRA0A1B0GVN0 87 aa7.91□□□□□ -1.14
RNF40-211ENST00000567365 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP7.91□□□□□ -1.14
RNF40-211ENST00000567365 HERVK_113P63121 156 aa7.91□□□□□ -1.14
RNF40-211ENST00000567365 ORAOV1Q8WV07 137 aa7.91□□□□□ -1.14
RNF40-211ENST00000567365 CARD19Q96LW7 228 aa7.91□□□□□ -1.14
RNF40-211ENST00000567365 CDKN2A-AS1Q9UH64 79 aa7.91□□□□□ -1.14
RNF40-211ENST00000567365 F8WDY8 70 aa7.9□□□□□ -1.14
RNF40-211ENST00000567365 SEC11AP67812 179 aa7.9□□□□□ -1.14
RNF40-211ENST00000567365 PKHD1L1Q86WI1 4243 aa7.89□□□□□ -1.15
RNF40-211ENST00000567365 ATP5LO75964 103 aa7.89□□□□□ -1.15
RNF40-211ENST00000567365 SMR3BP02814 79 aaPredicted RBP7.89□□□□□ -1.15
RNF40-211ENST00000567365 CHTF8P0CG12 524 aa7.89□□□□□ -1.15
RNF40-211ENST00000567365 C10orf25Q5T742 122 aa7.89□□□□□ -1.15
RNF40-211ENST00000567365 SPACA4Q8TDM5 124 aa7.89□□□□□ -1.15
RNF40-211ENST00000567365 MRPL35Q9NZE8 188 aaKnown RBP7.89□□□□□ -1.15
RNF40-211ENST00000567365 MYCBP2O75592 4640 aa7.89□□□□□ -1.15
RNF40-211ENST00000567365 NUPR1O60356 82 aa7.88□□□□□ -1.15
RNF40-211ENST00000567365 SERF1AO75920 110 aa7.88□□□□□ -1.15
RNF40-211ENST00000567365 IGLC3P0DOY3 106 aa7.88□□□□□ -1.15
RNF40-211ENST00000567365 RNF151Q2KHN1 245 aa7.88□□□□□ -1.15
RNF40-211ENST00000567365 BAGE3Q86Y29 109 aa7.88□□□□□ -1.15
RNF40-211ENST00000567365 CAMK2N2Q96S95 79 aa7.88□□□□□ -1.15
RNF40-211ENST00000567365 A0A096LNI7 61 aa7.87□□□□□ -1.15
RNF40-211ENST00000567365 SMIM1B2RUZ4 78 aa7.87□□□□□ -1.15
RNF40-211ENST00000567365 EPM2AB3EWF7 344 aa7.87□□□□□ -1.15
RNF40-211ENST00000567365 HSBP1O75506 76 aa7.87□□□□□ -1.15
RNF40-211ENST00000567365 FAM19A2Q8N3H0 131 aa7.87□□□□□ -1.15
RNF40-211ENST00000567365 GEMIN7Q9H840 131 aaKnown RBP7.87□□□□□ -1.15
RNF40-211ENST00000567365 A0A087WYN8 130 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST1H2BKO60814 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST1H2BJP06899 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST1H2BOP23527 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST1H2BBP33778 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST1H2BDP58876 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 KRTAP10-4P60372 401 aaPredicted RBP7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST1H2BCP62807 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST2H2BEQ16778 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST2H2BFQ5QNW6 126 aaPredicted RBP7.86□□□□□ -1.15
RNF40-211ENST00000567365 Q5VSD8 79 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 UNQ6190/PRO20217Q6UXQ8 127 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST1H2BHQ93079 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST1H2BNQ99877 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 HIST1H2BMQ99879 126 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 PLAC8Q9NZF1 115 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 C6orf48Q9UBA6 75 aa7.86□□□□□ -1.15
RNF40-211ENST00000567365 NDUFA1O15239 70 aa7.85□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 114.2 ms