RNA–Protein interactions for RNA: ENST00000567060.5

CLN6-208, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 2

Gene CLN6, Length 945 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-208ENST00000567060 HIST1H2BMQ99879 126 aa11.04□□□□□ -0.64
CLN6-208ENST00000567060 GAGE12HA6NDE8 117 aa11.03□□□□□ -0.64
CLN6-208ENST00000567060 FAM19A3Q7Z5A8 133 aa11.03□□□□□ -0.64
CLN6-208ENST00000567060 OPRPNQ99935 248 aaPredicted RBP11.03□□□□□ -0.64
CLN6-208ENST00000567060 PGPEP1Q9NXJ5 209 aa11.03□□□□□ -0.64
CLN6-208ENST00000567060 SERF1AO75920 110 aa11.02□□□□□ -0.65
CLN6-208ENST00000567060 XCL1P47992 114 aa11.02□□□□□ -0.65
CLN6-208ENST00000567060 FOXI1Q12951 378 aa11.02□□□□□ -0.65
CLN6-208ENST00000567060 RNASE13Q5GAN3 156 aaKnown RBP11.02□□□□□ -0.65
CLN6-208ENST00000567060 Q8N814 137 aa11.02□□□□□ -0.65
CLN6-208ENST00000567060 BAALCQ8WXS3 180 aa11.02□□□□□ -0.65
CLN6-208ENST00000567060 UBE2D1P51668 147 aa11.01□□□□□ -0.65
CLN6-208ENST00000567060 LINC00173Q6ZV60 143 aa11.01□□□□□ -0.65
CLN6-208ENST00000567060 PMVKQ15126 192 aa11□□□□□ -0.65
CLN6-208ENST00000567060 USP17L23D6RBM5 183 aa10.99□□□□□ -0.65
CLN6-208ENST00000567060 COX7A2LO14548 114 aa10.99□□□□□ -0.65
CLN6-208ENST00000567060 COA6Q5JTJ3 125 aaKnown RBP10.99□□□□□ -0.65
CLN6-208ENST00000567060 LINC01561Q8N1V8 128 aa10.99□□□□□ -0.65
CLN6-208ENST00000567060 PACRGQ96M98 296 aaPredicted RBP10.99□□□□□ -0.65
CLN6-208ENST00000567060 IGHV3OR16-9A0A0B4J2B5 98 aa10.98□□□□□ -0.65
CLN6-208ENST00000567060 IGHV1-58A0A0C4DH39 117 aa10.98□□□□□ -0.65
CLN6-208ENST00000567060 APOMO95445 188 aa10.98□□□□□ -0.65
CLN6-208ENST00000567060 LINC00310P59036 64 aa10.98□□□□□ -0.65
CLN6-208ENST00000567060 HERVK_113P63121 156 aa10.98□□□□□ -0.65
CLN6-208ENST00000567060 PMCHL1Q16048 86 aa10.98□□□□□ -0.65
CLN6-208ENST00000567060 LINC00242Q5T6M2 205 aa10.98□□□□□ -0.65
CLN6-208ENST00000567060 MYCBP2O75592 4640 aa10.97□□□□□ -0.65
CLN6-208ENST00000567060 CST9LQ9H4G1 147 aa10.97□□□□□ -0.65
CLN6-208ENST00000567060 HSPB8Q9UJY1 196 aa10.97□□□□□ -0.65
CLN6-208ENST00000567060 DMBT1Q9UGM3 2413 aaPredicted RBP10.96□□□□□ -0.65
CLN6-208ENST00000567060 VPS13BQ7Z7G8 4022 aa10.96□□□□□ -0.65
CLN6-208ENST00000567060 LEPROTL1O95214 131 aa10.96□□□□□ -0.65
CLN6-208ENST00000567060 MALP21145 153 aa10.96□□□□□ -0.65
CLN6-208ENST00000567060 WFDC2Q14508 124 aa10.96□□□□□ -0.65
CLN6-208ENST00000567060 SPATA12Q7Z6I5 190 aa10.96□□□□□ -0.65
CLN6-208ENST00000567060 IFI27L1Q96BM0 104 aa10.96□□□□□ -0.65
CLN6-208ENST00000567060 A0A087WZ39 114 aa10.95□□□□□ -0.66
CLN6-208ENST00000567060 GVQW2A0A096LPI5 108 aaPredicted RBP10.95□□□□□ -0.66
CLN6-208ENST00000567060 TINCRA0A1B0GVN0 87 aa10.95□□□□□ -0.66
CLN6-208ENST00000567060 FAM19A2Q8N3H0 131 aa10.95□□□□□ -0.66
CLN6-208ENST00000567060 GEMIN7Q9H840 131 aaKnown RBP10.95□□□□□ -0.66
CLN6-208ENST00000567060 TRAV12-1A0A0B4J245 112 aa10.94□□□□□ -0.66
CLN6-208ENST00000567060 LECT2O14960 151 aa10.94□□□□□ -0.66
CLN6-208ENST00000567060 C15orf56Q8N910 161 aa10.94□□□□□ -0.66
CLN6-208ENST00000567060 F8WDY8 70 aa10.93□□□□□ -0.66
CLN6-208ENST00000567060 PRSS1P07477 247 aa10.93□□□□□ -0.66
CLN6-208ENST00000567060 OR10D4PQ8NGN7 298 aa10.93□□□□□ -0.66
CLN6-208ENST00000567060 IGLV5-45A0A087WSX0 123 aa10.92□□□□□ -0.66
CLN6-208ENST00000567060 IGLV5-52A0A0A0MRZ9 124 aa10.92□□□□□ -0.66
CLN6-208ENST00000567060 hDV102S1A0JD36 115 aa10.92□□□□□ -0.66
CLN6-208ENST00000567060 NUPR1O60356 82 aa10.92□□□□□ -0.66
CLN6-208ENST00000567060 KRTAP10-2P60368 255 aa10.92□□□□□ -0.66
CLN6-208ENST00000567060 CNBPP62633 177 aaKnown RBP10.92□□□□□ -0.66
CLN6-208ENST00000567060 ZC2HC1BQ5TFG8 222 aa10.92□□□□□ -0.66
CLN6-208ENST00000567060 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.91□□□□□ -0.66
CLN6-208ENST00000567060 IGLC3P0DOY3 106 aa10.91□□□□□ -0.66
CLN6-208ENST00000567060 C5orf38Q86SI9 138 aa10.91□□□□□ -0.66
CLN6-208ENST00000567060 IGHV3-64A0A075B6Q5 118 aa10.9□□□□□ -0.66
CLN6-208ENST00000567060 A0A0J9YXV3 536 aa10.9□□□□□ -0.66
CLN6-208ENST00000567060 ZNF561-AS1K7EIQ3 104 aa10.9□□□□□ -0.66
CLN6-208ENST00000567060 NDUFA6P56556 154 aa10.9□□□□□ -0.66
CLN6-208ENST00000567060 COX6A2Q02221 97 aa10.9□□□□□ -0.66
CLN6-208ENST00000567060 H3BRM9 83 aa10.89□□□□□ -0.67
CLN6-208ENST00000567060 C2orf48Q96LS8 159 aa10.89□□□□□ -0.67
CLN6-208ENST00000567060 PKIGQ9Y2B9 76 aa10.89□□□□□ -0.67
CLN6-208ENST00000567060 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.88□□□□□ -0.67
CLN6-208ENST00000567060 F8VRH5 84 aa10.88□□□□□ -0.67
CLN6-208ENST00000567060 LINC00469Q8N7U9 141 aa10.88□□□□□ -0.67
CLN6-208ENST00000567060 MAP1LC3CQ9BXW4 147 aa10.88□□□□□ -0.67
CLN6-208ENST00000567060 CHTOPQ9Y3Y2 248 aaKnown RBP10.88□□□□□ -0.67
CLN6-208ENST00000567060 GCSHP23434 173 aa10.87□□□□□ -0.67
CLN6-208ENST00000567060 CHAC1Q9BUX1 264 aa10.87□□□□□ -0.67
CLN6-208ENST00000567060 CDKN2A-AS1Q9UH64 79 aa10.87□□□□□ -0.67
CLN6-208ENST00000567060 IGLV4-69A0A075B6H9 119 aa10.86□□□□□ -0.67
CLN6-208ENST00000567060 EPM2AB3EWF7 344 aa10.86□□□□□ -0.67
CLN6-208ENST00000567060 S100A6P06703 90 aa10.86□□□□□ -0.67
CLN6-208ENST00000567060 FABP4P15090 132 aa10.86□□□□□ -0.67
CLN6-208ENST00000567060 SPAG11BQ08648 103 aa10.86□□□□□ -0.67
CLN6-208ENST00000567060 HIGD2BQ4VC39 106 aa10.86□□□□□ -0.67
CLN6-208ENST00000567060 C9orf163Q8N9P6 203 aa10.86□□□□□ -0.67
CLN6-208ENST00000567060 ORAOV1Q8WV07 137 aa10.86□□□□□ -0.67
CLN6-208ENST00000567060 INAFM2P0DMQ5 153 aa10.85□□□□□ -0.67
CLN6-208ENST00000567060 SRRM2Q9UQ35 2752 aaKnown RBP10.85□□□□□ -0.67
CLN6-208ENST00000567060 Q8IZM0 81 aa10.84□□□□□ -0.67
CLN6-208ENST00000567060 PRSS2P07478 247 aa10.83□□□□□ -0.68
CLN6-208ENST00000567060 PLNP26678 52 aa10.83□□□□□ -0.68
CLN6-208ENST00000567060 CXCL5P42830 114 aa10.83□□□□□ -0.68
CLN6-208ENST00000567060 SYCNQ0VAF6 134 aa10.83□□□□□ -0.68
CLN6-208ENST00000567060 ODF1Q14990 250 aa10.83□□□□□ -0.68
CLN6-208ENST00000567060 C11orf86A6NJI1 115 aa10.82□□□□□ -0.68
CLN6-208ENST00000567060 SMIM1B2RUZ4 78 aa10.82□□□□□ -0.68
CLN6-208ENST00000567060 ZNF22P17026 224 aaPredicted RBP10.82□□□□□ -0.68
CLN6-208ENST00000567060 RNF151Q2KHN1 245 aa10.82□□□□□ -0.68
CLN6-208ENST00000567060 CARD19Q96LW7 228 aa10.82□□□□□ -0.68
CLN6-208ENST00000567060 CAMK2N2Q96S95 79 aa10.82□□□□□ -0.68
CLN6-208ENST00000567060 MRPL35Q9NZE8 188 aaKnown RBP10.82□□□□□ -0.68
CLN6-208ENST00000567060 FLG2Q5D862 2391 aaPredicted RBP10.81□□□□□ -0.68
CLN6-208ENST00000567060 NDUFA1O15239 70 aa10.81□□□□□ -0.68
CLN6-208ENST00000567060 SLPIP03973 132 aa10.81□□□□□ -0.68
CLN6-208ENST00000567060 AKR1D1P51857 326 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 66.6 ms