RNA–Protein interactions for RNA: ENST00000566756.5

CMTM3-213, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 2

Gene CMTM3, Length 1,950 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-213ENST00000566756 CKS1BP61024 79 aa11.95□□□□□ -0.5
CMTM3-213ENST00000566756 NTN5Q8WTR8 489 aaPredicted RBP11.95□□□□□ -0.5
CMTM3-213ENST00000566756 LST1O00453 97 aa11.94□□□□□ -0.5
CMTM3-213ENST00000566756 SMIM1B2RUZ4 78 aa11.94□□□□□ -0.5
CMTM3-213ENST00000566756 H7C423 109 aa11.94□□□□□ -0.5
CMTM3-213ENST00000566756 NTM-AS1Q6ZSK4 140 aa11.94□□□□□ -0.5
CMTM3-213ENST00000566756 HERV-K104P63124 156 aa11.93□□□□□ -0.5
CMTM3-213ENST00000566756 LINC00308Q8TCZ7 52 aa11.93□□□□□ -0.5
CMTM3-213ENST00000566756 Q9H8V8 135 aa11.93□□□□□ -0.5
CMTM3-213ENST00000566756 CDC42SE2Q9NRR3 84 aa11.93□□□□□ -0.5
CMTM3-213ENST00000566756 LINC00694P0DN24 101 aa11.92□□□□□ -0.5
CMTM3-213ENST00000566756 Q6ZTI0 123 aa11.92□□□□□ -0.5
CMTM3-213ENST00000566756 UBE2WQ96B02 151 aa11.92□□□□□ -0.5
CMTM3-213ENST00000566756 C16orf74Q96GX8 76 aa11.92□□□□□ -0.5
CMTM3-213ENST00000566756 C2orf82Q6UX34 121 aa11.92□□□□□ -0.5
CMTM3-213ENST00000566756 LINC00482Q8N8I6 264 aa11.91□□□□□ -0.5
CMTM3-213ENST00000566756 ZNF625Q96I27 306 aaPredicted RBP11.91□□□□□ -0.5
CMTM3-213ENST00000566756 F5H768 121 aa11.9□□□□□ -0.5
CMTM3-213ENST00000566756 PF4P02776 101 aa11.9□□□□□ -0.5
CMTM3-213ENST00000566756 NPC2P61916 151 aa11.9□□□□□ -0.5
CMTM3-213ENST00000566756 DEFB121Q5J5C9 76 aa11.9□□□□□ -0.5
CMTM3-213ENST00000566756 CITED1Q99966 193 aa11.9□□□□□ -0.5
CMTM3-213ENST00000566756 BAHCC1Q9P281 2608 aa11.9□□□□□ -0.5
CMTM3-213ENST00000566756 TRBV6-4A0A1B0GX49 114 aa11.89□□□□□ -0.51
CMTM3-213ENST00000566756 TMEM243Q9BU79 118 aa11.89□□□□□ -0.51
CMTM3-213ENST00000566756 UBE2L6O14933 153 aa11.88□□□□□ -0.51
CMTM3-213ENST00000566756 OVOL2Q9BRP0 275 aa11.88□□□□□ -0.51
CMTM3-213ENST00000566756 GIG44P09565 113 aaPredicted RBP11.88□□□□□ -0.51
CMTM3-213ENST00000566756 TRAV13-1A0A0B4J241 112 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 TRAV8-4A0A0B4J246 113 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 TEX49A0A1B0GTD5 131 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 PLAC8L1A1L4L8 177 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 GAGE12JA6NER3 117 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 GAGE4Q13068 117 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 GAGE5Q13069 117 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 DAND5Q8N907 189 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 NOP10Q9NPE3 64 aaKnown RBP11.87□□□□□ -0.51
CMTM3-213ENST00000566756 FAM240AA0A1B0GVK7 77 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 MRPL23Q16540 153 aaKnown RBP11.87□□□□□ -0.51
CMTM3-213ENST00000566756 SHISA2Q6UWI4 295 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 PRIMA1Q86XR5 153 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 CLEC2BQ92478 149 aa11.87□□□□□ -0.51
CMTM3-213ENST00000566756 Q6Q795 121 aa11.86□□□□□ -0.51
CMTM3-213ENST00000566756 COX7A2LO14548 114 aa11.85□□□□□ -0.51
CMTM3-213ENST00000566756 C19orf73Q9NVV2 129 aa11.85□□□□□ -0.51
CMTM3-213ENST00000566756 SNCGO76070 127 aa11.84□□□□□ -0.51
CMTM3-213ENST00000566756 MEIG1Q5JSS6 88 aa11.84□□□□□ -0.51
CMTM3-213ENST00000566756 TRGV2A0A075B6R0 118 aa11.83□□□□□ -0.52
CMTM3-213ENST00000566756 SOSTDC1Q6X4U4 206 aa11.83□□□□□ -0.52
CMTM3-213ENST00000566756 CSNK1G2-AS1Q8NCQ2 148 aa11.83□□□□□ -0.52
CMTM3-213ENST00000566756 JMJD1CQ15652 2540 aa11.83□□□□□ -0.52
CMTM3-213ENST00000566756 TEP1Q99973 2627 aaKnown RBP11.82□□□□□ -0.52
CMTM3-213ENST00000566756 C9orf66Q5T8R8 295 aa11.81□□□□□ -0.52
CMTM3-213ENST00000566756 FAM222AQ5U5X8 452 aa11.81□□□□□ -0.52
CMTM3-213ENST00000566756 GAGE7O76087 117 aa11.81□□□□□ -0.52
CMTM3-213ENST00000566756 TRACP01848 142 aa11.81□□□□□ -0.52
CMTM3-213ENST00000566756 GAGE12FP0CL80 117 aa11.81□□□□□ -0.52
CMTM3-213ENST00000566756 GAGE12GP0CL81 117 aa11.81□□□□□ -0.52
CMTM3-213ENST00000566756 GAGE12IP0CL82 117 aa11.81□□□□□ -0.52
CMTM3-213ENST00000566756 NIPBLQ6KC79 2804 aaeCLIP11.81□□□□□ -0.52
CMTM3-213ENST00000566756 GAGE2BQ13066 116 aa11.8□□□□□ -0.52
CMTM3-213ENST00000566756 GAGE2EQ4V326 116 aa11.8□□□□□ -0.52
CMTM3-213ENST00000566756 GAGE2DQ9UEU5 116 aa11.8□□□□□ -0.52
CMTM3-213ENST00000566756 ATRQ13535 2644 aa11.8□□□□□ -0.52
CMTM3-213ENST00000566756 TRGV4A0A0C4DH28 118 aa11.79□□□□□ -0.52
CMTM3-213ENST00000566756 COX7B2Q8TF08 81 aa11.79□□□□□ -0.52
CMTM3-213ENST00000566756 TENM1Q9UKZ4 2725 aa11.78□□□□□ -0.52
CMTM3-213ENST00000566756 TRAV13-2A0A0B4J235 113 aa11.78□□□□□ -0.52
CMTM3-213ENST00000566756 TRBV6-8A0A0A6YYG3 113 aa11.78□□□□□ -0.52
CMTM3-213ENST00000566756 CYSRT1A8MQ03 144 aa11.78□□□□□ -0.52
CMTM3-213ENST00000566756 ACYP1P07311 99 aa11.78□□□□□ -0.52
CMTM3-213ENST00000566756 FHL2Q14192 279 aa11.78□□□□□ -0.52
CMTM3-213ENST00000566756 RPL35AP18077 110 aaKnown RBP11.77□□□□□ -0.53
CMTM3-213ENST00000566756 WFDC9Q8NEX5 89 aa11.77□□□□□ -0.53
CMTM3-213ENST00000566756 A0A0U1RRA0 63 aa11.76□□□□□ -0.53
CMTM3-213ENST00000566756 C15orf53Q8NAA6 179 aa11.76□□□□□ -0.53
CMTM3-213ENST00000566756 ANAPC13Q9BS18 74 aa11.76□□□□□ -0.53
CMTM3-213ENST00000566756 LOC100131303A0A0U1RQF7 123 aa11.76□□□□□ -0.53
CMTM3-213ENST00000566756 RPL28P46779 137 aaKnown RBP11.76□□□□□ -0.53
CMTM3-213ENST00000566756 KIR2DL5BQ8NHK3 375 aa11.75□□□□□ -0.53
CMTM3-213ENST00000566756 WFDC10AQ9H1F0 79 aa11.75□□□□□ -0.53
CMTM3-213ENST00000566756 IGHV3OR16-9A0A0B4J2B5 98 aa11.74□□□□□ -0.53
CMTM3-213ENST00000566756 KRTAP24-1Q3LI83 254 aa11.74□□□□□ -0.53
CMTM3-213ENST00000566756 SPATA3Q8NHX4 192 aa11.74□□□□□ -0.53
CMTM3-213ENST00000566756 A0A087WZ39 114 aa11.74□□□□□ -0.53
CMTM3-213ENST00000566756 GAGE6Q13070 117 aa11.74□□□□□ -0.53
CMTM3-213ENST00000566756 LINC00612Q8N6U2 182 aa11.74□□□□□ -0.53
CMTM3-213ENST00000566756 TRAV26-1A0A087WT03 109 aa11.73□□□□□ -0.53
CMTM3-213ENST00000566756 IBA57-AS1B1ANH7 110 aa11.73□□□□□ -0.53
CMTM3-213ENST00000566756 WIPF1O43516 503 aa11.73□□□□□ -0.53
CMTM3-213ENST00000566756 NOTCH3Q9UM47 2321 aa11.73□□□□□ -0.53
CMTM3-213ENST00000566756 CRPP02741 224 aa11.72□□□□□ -0.53
CMTM3-213ENST00000566756 NDUFV3P56181 108 aaKnown RBP11.72□□□□□ -0.53
CMTM3-213ENST00000566756 MIR7-3HGQ8N6C7 128 aa11.72□□□□□ -0.53
CMTM3-213ENST00000566756 IGLV4-60A0A075B6I1 120 aa11.71□□□□□ -0.53
CMTM3-213ENST00000566756 CHCHD5Q9BSY4 110 aa11.71□□□□□ -0.53
CMTM3-213ENST00000566756 VWFP04275 2813 aa11.71□□□□□ -0.53
CMTM3-213ENST00000566756 TTC32Q5I0X7 151 aa11.7□□□□□ -0.54
CMTM3-213ENST00000566756 SND1-IT1Q9HBX3 110 aa11.7□□□□□ -0.54
CMTM3-213ENST00000566756 TRBV7-7A0A0K0K1E9 115 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 76.7 ms