RNA–Protein interactions for RNA: ENST00000565545.1

CSPG4P13-201, Transcript of chondroitin sulfate proteoglycan 4 pseudogene 13, humanhuman

TSL 5

Gene CSPG4P13, Length 657 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P13-201ENST00000565545 TSTD3H0UI37 97 aa12.95□□□□□ -0.34
CSPG4P13-201ENST00000565545 H3BRM9 83 aa12.95□□□□□ -0.34
CSPG4P13-201ENST00000565545 IGHV3-30P01768 117 aa12.95□□□□□ -0.34
CSPG4P13-201ENST00000565545 IGHV3-33P01772 117 aa12.95□□□□□ -0.34
CSPG4P13-201ENST00000565545 IGHV3-30-3P0DP02 117 aa12.95□□□□□ -0.34
CSPG4P13-201ENST00000565545 IGHV3-30-5P0DP03 117 aa12.95□□□□□ -0.34
CSPG4P13-201ENST00000565545 ANKRD39Q53RE8 183 aa12.95□□□□□ -0.34
CSPG4P13-201ENST00000565545 Q8N3U1 123 aa12.95□□□□□ -0.34
CSPG4P13-201ENST00000565545 PRR34Q9NV39 138 aa12.95□□□□□ -0.34
CSPG4P13-201ENST00000565545 IGKV3OR2-268A0A0C4DH90 116 aa12.94□□□□□ -0.34
CSPG4P13-201ENST00000565545 SIVA1O15304 175 aa12.94□□□□□ -0.34
CSPG4P13-201ENST00000565545 LINC00469Q8N7U9 141 aa12.94□□□□□ -0.34
CSPG4P13-201ENST00000565545 KLK12Q9UKR0 248 aa12.94□□□□□ -0.34
CSPG4P13-201ENST00000565545 TMEM223A0PJW6 202 aa12.93□□□□□ -0.34
CSPG4P13-201ENST00000565545 E9PLD3 99 aa12.93□□□□□ -0.34
CSPG4P13-201ENST00000565545 CRPP02741 224 aa12.92□□□□□ -0.34
CSPG4P13-201ENST00000565545 COX6A2Q02221 97 aa12.92□□□□□ -0.34
CSPG4P13-201ENST00000565545 TRAV8-4A0A0B4J246 113 aa12.91□□□□□ -0.34
CSPG4P13-201ENST00000565545 K7EP13 123 aa12.91□□□□□ -0.34
CSPG4P13-201ENST00000565545 CDKN2A-AS1Q9UH64 79 aa12.91□□□□□ -0.34
CSPG4P13-201ENST00000565545 MIAQ16674 131 aa12.9□□□□□ -0.34
CSPG4P13-201ENST00000565545 CLPSL2Q6UWE3 100 aa12.9□□□□□ -0.34
CSPG4P13-201ENST00000565545 UBE2DNLQ8IWF7 75 aa12.9□□□□□ -0.34
CSPG4P13-201ENST00000565545 PRO1933Q9H354 126 aa12.9□□□□□ -0.34
CSPG4P13-201ENST00000565545 IGHV3OR16-9A0A0B4J2B5 98 aa12.89□□□□□ -0.35
CSPG4P13-201ENST00000565545 COX8AP10176 69 aa12.89□□□□□ -0.35
CSPG4P13-201ENST00000565545 CD164L2Q6UWJ8 174 aa12.89□□□□□ -0.35
CSPG4P13-201ENST00000565545 ENHOQ6UWT2 76 aa12.89□□□□□ -0.35
CSPG4P13-201ENST00000565545 LINC01561Q8N1V8 128 aa12.89□□□□□ -0.35
CSPG4P13-201ENST00000565545 C10orf126Q8N4M7 172 aa12.89□□□□□ -0.35
CSPG4P13-201ENST00000565545 PLEKHB2Q96CS7 222 aa12.89□□□□□ -0.35
CSPG4P13-201ENST00000565545 UQCR10Q9UDW1 63 aa12.89□□□□□ -0.35
CSPG4P13-201ENST00000565545 FRAS1Q86XX4 4008 aa12.89□□□□□ -0.35
CSPG4P13-201ENST00000565545 IGHV1-58A0A0C4DH39 117 aa12.88□□□□□ -0.35
CSPG4P13-201ENST00000565545 LEPROTO15243 131 aa12.88□□□□□ -0.35
CSPG4P13-201ENST00000565545 NMUP48645 174 aa12.88□□□□□ -0.35
CSPG4P13-201ENST00000565545 CHCHD10Q8WYQ3 142 aaPredicted RBP12.88□□□□□ -0.35
CSPG4P13-201ENST00000565545 UBE2WQ96B02 151 aa12.88□□□□□ -0.35
CSPG4P13-201ENST00000565545 Q9H8V8 135 aa12.88□□□□□ -0.35
CSPG4P13-201ENST00000565545 HERC2O95714 4834 aa12.88□□□□□ -0.35
CSPG4P13-201ENST00000565545 IGKV2D-26A0A0A0MRZ7 120 aa12.87□□□□□ -0.35
CSPG4P13-201ENST00000565545 DLEU1O43261 78 aa12.87□□□□□ -0.35
CSPG4P13-201ENST00000565545 SLC25A34Q6PIV7 304 aa12.87□□□□□ -0.35
CSPG4P13-201ENST00000565545 C14orf144Q96I85 54 aa12.87□□□□□ -0.35
CSPG4P13-201ENST00000565545 MIEN1Q9BRT3 115 aa12.87□□□□□ -0.35
CSPG4P13-201ENST00000565545 A0A087WZ39 114 aa12.86□□□□□ -0.35
CSPG4P13-201ENST00000565545 XCL1P47992 114 aa12.86□□□□□ -0.35
CSPG4P13-201ENST00000565545 IBA57-AS1B1ANH7 110 aa12.85□□□□□ -0.35
CSPG4P13-201ENST00000565545 SPINK8P0C7L1 97 aa12.85□□□□□ -0.35
CSPG4P13-201ENST00000565545 BOD1L2Q8IYS8 172 aa12.85□□□□□ -0.35
CSPG4P13-201ENST00000565545 IGLV5-39A0A0G2JS06 123 aa12.84□□□□□ -0.35
CSPG4P13-201ENST00000565545 TRAV8-3A0A0A6YYJ7 113 aa12.83□□□□□ -0.36
CSPG4P13-201ENST00000565545 SMIM1B2RUZ4 78 aa12.83□□□□□ -0.36
CSPG4P13-201ENST00000565545 J3QQQ9 107 aa12.83□□□□□ -0.36
CSPG4P13-201ENST00000565545 LGALS3P17931 250 aaKnown RBP12.83□□□□□ -0.36
CSPG4P13-201ENST00000565545 PCP2Q8IVA1 136 aa12.83□□□□□ -0.36
CSPG4P13-201ENST00000565545 KMT2AQ03164 3969 aa12.83□□□□□ -0.36
CSPG4P13-201ENST00000565545 DNAH10Q8IVF4 4471 aa12.82□□□□□ -0.36
CSPG4P13-201ENST00000565545 IGLV10-54A0A075B6I4 117 aa12.82□□□□□ -0.36
CSPG4P13-201ENST00000565545 COX7A2LO14548 114 aa12.82□□□□□ -0.36
CSPG4P13-201ENST00000565545 FOXI1Q12951 378 aa12.81□□□□□ -0.36
CSPG4P13-201ENST00000565545 C5orf38Q86SI9 138 aa12.81□□□□□ -0.36
CSPG4P13-201ENST00000565545 RMI2Q96E14 147 aa12.81□□□□□ -0.36
CSPG4P13-201ENST00000565545 IGHV3-64A0A075B6Q5 118 aa12.8□□□□□ -0.36
CSPG4P13-201ENST00000565545 GAGE12HA6NDE8 117 aa12.8□□□□□ -0.36
CSPG4P13-201ENST00000565545 DDTP30046 118 aa12.8□□□□□ -0.36
CSPG4P13-201ENST00000565545 C1orf43Q9BWL3 253 aa12.8□□□□□ -0.36
CSPG4P13-201ENST00000565545 MYMXA0A1B0GTQ4 84 aa12.79□□□□□ -0.36
CSPG4P13-201ENST00000565545 PCP4L1A6NKN8 68 aa12.78□□□□□ -0.36
CSPG4P13-201ENST00000565545 ZNF815PA8K554 130 aa12.78□□□□□ -0.36
CSPG4P13-201ENST00000565545 APOMO95445 188 aa12.78□□□□□ -0.36
CSPG4P13-201ENST00000565545 TSPEAR-AS2P59090 65 aa12.78□□□□□ -0.36
CSPG4P13-201ENST00000565545 MAPKAPK5-AS1Q8N8E1 139 aa12.78□□□□□ -0.36
CSPG4P13-201ENST00000565545 MALP21145 153 aa12.77□□□□□ -0.37
CSPG4P13-201ENST00000565545 HNRNPA3P51991 378 aaKnown RBP12.77□□□□□ -0.37
CSPG4P13-201ENST00000565545 TTC32Q5I0X7 151 aa12.77□□□□□ -0.37
CSPG4P13-201ENST00000565545 KRTAP26-1Q6PEX3 210 aa12.77□□□□□ -0.37
CSPG4P13-201ENST00000565545 COX7B2Q8TF08 81 aa12.76□□□□□ -0.37
CSPG4P13-201ENST00000565545 TTTY13Q9BZ97 58 aa12.76□□□□□ -0.37
CSPG4P13-201ENST00000565545 COX11Q9Y6N1 276 aa12.76□□□□□ -0.37
CSPG4P13-201ENST00000565545 IGKV2D-24A0A075B6R9 120 aa12.75□□□□□ -0.37
CSPG4P13-201ENST00000565545 HIGD1BQ9P298 99 aa12.75□□□□□ -0.37
CSPG4P13-201ENST00000565545 NDUFA12Q9UI09 145 aa12.75□□□□□ -0.37
CSPG4P13-201ENST00000565545 PCLOQ9Y6V0 5065 aa12.75□□□□□ -0.37
CSPG4P13-201ENST00000565545 NDUFA1O15239 70 aa12.74□□□□□ -0.37
CSPG4P13-201ENST00000565545 SFTA2Q6UW10 78 aa12.74□□□□□ -0.37
CSPG4P13-201ENST00000565545 Q8IZM0 81 aa12.74□□□□□ -0.37
CSPG4P13-201ENST00000565545 Q9HAA7 133 aa12.73□□□□□ -0.37
CSPG4P13-201ENST00000565545 NBDYA0A0U1RRE5 68 aa12.72□□□□□ -0.37
CSPG4P13-201ENST00000565545 PRSS2P07478 247 aa12.72□□□□□ -0.37
CSPG4P13-201ENST00000565545 SCGB1D4Q6XE38 83 aa12.72□□□□□ -0.37
CSPG4P13-201ENST00000565545 C2orf91Q6ZV80 131 aa12.72□□□□□ -0.37
CSPG4P13-201ENST00000565545 ORAOV1Q8WV07 137 aa12.72□□□□□ -0.37
CSPG4P13-201ENST00000565545 TM2D2Q9BX73 214 aa12.72□□□□□ -0.37
CSPG4P13-201ENST00000565545 TOMM7Q9P0U1 55 aa12.72□□□□□ -0.37
CSPG4P13-201ENST00000565545 HERV-K104P63124 156 aa12.71□□□□□ -0.37
CSPG4P13-201ENST00000565545 TP73-AS1Q9UF72 201 aa12.71□□□□□ -0.37
CSPG4P13-201ENST00000565545 CXCL5P42830 114 aa12.7□□□□□ -0.38
CSPG4P13-201ENST00000565545 C6orf226Q5I0X4 101 aa12.7□□□□□ -0.38
CSPG4P13-201ENST00000565545 CFAP161Q6P656 301 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms