RNA–Protein interactions for RNA: ENST00000564844.1

MAP1LC3B-206, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

TSL 1 (best)

Gene MAP1LC3B, Length 3,085 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-206ENST00000564844 NTM-AS1Q6ZSK4 140 aa14.66□□□□□ -0.06
MAP1LC3B-206ENST00000564844 B4DSR2 109 aa14.66□□□□□ -0.06
MAP1LC3B-206ENST00000564844 TIMM17BO60830 172 aa14.66□□□□□ -0.06
MAP1LC3B-206ENST00000564844 LINC00643Q86TS7 51 aa14.66□□□□□ -0.06
MAP1LC3B-206ENST00000564844 MIR7-3HGQ8N6C7 128 aa14.66□□□□□ -0.06
MAP1LC3B-206ENST00000564844 SMIM9A6NGZ8 99 aa14.65□□□□□ -0.06
MAP1LC3B-206ENST00000564844 PFN2P35080 140 aa14.65□□□□□ -0.06
MAP1LC3B-206ENST00000564844 C11orf72Q8NBR9 251 aa14.65□□□□□ -0.06
MAP1LC3B-206ENST00000564844 A0A087WVE0 104 aa14.65□□□□□ -0.06
MAP1LC3B-206ENST00000564844 Q6ZTI0 123 aa14.65□□□□□ -0.06
MAP1LC3B-206ENST00000564844 A0A087WYN8 130 aa14.64□□□□□ -0.07
MAP1LC3B-206ENST00000564844 DYNLRB2Q8TF09 96 aa14.64□□□□□ -0.07
MAP1LC3B-206ENST00000564844 LOC100131303A0A0U1RQF7 123 aa14.64□□□□□ -0.07
MAP1LC3B-206ENST00000564844 PLA2G2AP14555 144 aa14.64□□□□□ -0.07
MAP1LC3B-206ENST00000564844 LINC00158P58513 81 aa14.64□□□□□ -0.07
MAP1LC3B-206ENST00000564844 C3orf22Q8N5N4 141 aa14.64□□□□□ -0.07
MAP1LC3B-206ENST00000564844 LINC00337Q8N6G1 96 aa14.64□□□□□ -0.07
MAP1LC3B-206ENST00000564844 USP24Q9UPU5 2620 aa14.63□□□□□ -0.07
MAP1LC3B-206ENST00000564844 IGLV5-39A0A0G2JS06 123 aa14.63□□□□□ -0.07
MAP1LC3B-206ENST00000564844 OR13C6PQ8NH95 151 aa14.63□□□□□ -0.07
MAP1LC3B-206ENST00000564844 MAP6D1Q9H9H5 199 aa14.63□□□□□ -0.07
MAP1LC3B-206ENST00000564844 BEAN1Q3B7T3 259 aa14.62□□□□□ -0.07
MAP1LC3B-206ENST00000564844 ZNF469Q96JG9 3925 aaPredicted RBP14.62□□□□□ -0.07
MAP1LC3B-206ENST00000564844 hADV29S1A0JD25 119 aa14.62□□□□□ -0.07
MAP1LC3B-206ENST00000564844 TMEM89A2RUT3 159 aa14.62□□□□□ -0.07
MAP1LC3B-206ENST00000564844 CYSTM1Q9H1C7 97 aa14.62□□□□□ -0.07
MAP1LC3B-206ENST00000564844 APCP25054 2843 aa14.61□□□□□ -0.07
MAP1LC3B-206ENST00000564844 IGLV5-45A0A087WSX0 123 aa14.61□□□□□ -0.07
MAP1LC3B-206ENST00000564844 DNAL4O96015 105 aa14.61□□□□□ -0.07
MAP1LC3B-206ENST00000564844 CRPP02741 224 aa14.61□□□□□ -0.07
MAP1LC3B-206ENST00000564844 MALP21145 153 aa14.61□□□□□ -0.07
MAP1LC3B-206ENST00000564844 ITPR3Q14573 2671 aa14.61□□□□□ -0.07
MAP1LC3B-206ENST00000564844 PRB1P04280 392 aa14.6□□□□□ -0.07
MAP1LC3B-206ENST00000564844 ACYP1P07311 99 aa14.6□□□□□ -0.07
MAP1LC3B-206ENST00000564844 SND1-IT1Q9HBX3 110 aa14.6□□□□□ -0.07
MAP1LC3B-206ENST00000564844 NCR3O14931 201 aa14.6□□□□□ -0.07
MAP1LC3B-206ENST00000564844 TMEM126AQ9H061 195 aa14.59□□□□□ -0.07
MAP1LC3B-206ENST00000564844 HIST2H2BCQ6DN03 193 aa14.59□□□□□ -0.07
MAP1LC3B-206ENST00000564844 UBE2L6O14933 153 aa14.58□□□□□ -0.07
MAP1LC3B-206ENST00000564844 INSP01308 110 aa14.58□□□□□ -0.07
MAP1LC3B-206ENST00000564844 RPL36AP83881 106 aaKnown RBP14.58□□□□□ -0.07
MAP1LC3B-206ENST00000564844 RPL36ALQ969Q0 106 aaKnown RBP14.58□□□□□ -0.07
MAP1LC3B-206ENST00000564844 SMIM11BQ8TCY0 68 aa14.57□□□□□ -0.08
MAP1LC3B-206ENST00000564844 NOP10Q9NPE3 64 aaKnown RBP14.57□□□□□ -0.08
MAP1LC3B-206ENST00000564844 LECT2O14960 151 aa14.57□□□□□ -0.08
MAP1LC3B-206ENST00000564844 TRACP01848 142 aa14.57□□□□□ -0.08
MAP1LC3B-206ENST00000564844 C5orf38Q86SI9 138 aa14.57□□□□□ -0.08
MAP1LC3B-206ENST00000564844 IGKV2-28A0A075B6P5 120 aa14.57□□□□□ -0.08
MAP1LC3B-206ENST00000564844 IGKV2D-28P01615 120 aa14.57□□□□□ -0.08
MAP1LC3B-206ENST00000564844 CDC42SE2Q9NRR3 84 aa14.57□□□□□ -0.08
MAP1LC3B-206ENST00000564844 F5H768 121 aa14.56□□□□□ -0.08
MAP1LC3B-206ENST00000564844 UQCRQO14949 82 aa14.56□□□□□ -0.08
MAP1LC3B-206ENST00000564844 RNASE1P07998 156 aaKnown RBP14.56□□□□□ -0.08
MAP1LC3B-206ENST00000564844 PAX4O43316 350 aa14.55□□□□□ -0.08
MAP1LC3B-206ENST00000564844 DNAJC30Q96LL9 226 aa14.55□□□□□ -0.08
MAP1LC3B-206ENST00000564844 ZNF702PQ9H963 129 aa14.55□□□□□ -0.08
MAP1LC3B-206ENST00000564844 WFDC9Q8NEX5 89 aa14.55□□□□□ -0.08
MAP1LC3B-206ENST00000564844 IMUPQ9GZP8 106 aa14.55□□□□□ -0.08
MAP1LC3B-206ENST00000564844 WFDC10AQ9H1F0 79 aa14.54□□□□□ -0.08
MAP1LC3B-206ENST00000564844 LINC00846Q9NV44 126 aa14.54□□□□□ -0.08
MAP1LC3B-206ENST00000564844 A0A1B0GX51 115 aa14.53□□□□□ -0.08
MAP1LC3B-206ENST00000564844 WIPF1O43516 503 aa14.53□□□□□ -0.08
MAP1LC3B-206ENST00000564844 STHQ8IWL8 128 aa14.53□□□□□ -0.08
MAP1LC3B-206ENST00000564844 C1orf158Q8N1D5 194 aa14.53□□□□□ -0.08
MAP1LC3B-206ENST00000564844 PEMTQ9UBM1 199 aa14.53□□□□□ -0.08
MAP1LC3B-206ENST00000564844 K7EQD1 137 aa14.52□□□□□ -0.08
MAP1LC3B-206ENST00000564844 INAFM2P0DMQ5 153 aa14.52□□□□□ -0.09
MAP1LC3B-206ENST00000564844 HIST1H4AP62805 103 aaKnown RBP14.52□□□□□ -0.09
MAP1LC3B-206ENST00000564844 TRGV2A0A075B6R0 118 aa14.51□□□□□ -0.09
MAP1LC3B-206ENST00000564844 FAM19A5Q7Z5A7 132 aaPredicted RBP14.51□□□□□ -0.09
MAP1LC3B-206ENST00000564844 LINC00526Q96FQ7 95 aa14.51□□□□□ -0.09
MAP1LC3B-206ENST00000564844 PRR3P79522 188 aaKnown RBP14.51□□□□□ -0.09
MAP1LC3B-206ENST00000564844 KIR2DL5BQ8NHK3 375 aa14.51□□□□□ -0.09
MAP1LC3B-206ENST00000564844 COX7B2Q8TF08 81 aa14.51□□□□□ -0.09
MAP1LC3B-206ENST00000564844 COX7CP15954 63 aa14.5□□□□□ -0.09
MAP1LC3B-206ENST00000564844 CLPSL2Q6UWE3 100 aa14.5□□□□□ -0.09
MAP1LC3B-206ENST00000564844 IGLV4-60A0A075B6I1 120 aa14.5□□□□□ -0.09
MAP1LC3B-206ENST00000564844 CCL18P55774 89 aa14.5□□□□□ -0.09
MAP1LC3B-206ENST00000564844 TRAV13-2A0A0B4J235 113 aa14.49□□□□□ -0.09
MAP1LC3B-206ENST00000564844 RPL35AP18077 110 aaKnown RBP14.49□□□□□ -0.09
MAP1LC3B-206ENST00000564844 ODF3L2Q3SX64 289 aa14.49□□□□□ -0.09
MAP1LC3B-206ENST00000564844 LINC01356Q8N9X3 169 aa14.49□□□□□ -0.09
MAP1LC3B-206ENST00000564844 COPS9Q8WXC6 57 aa14.49□□□□□ -0.09
MAP1LC3B-206ENST00000564844 DEFB114Q30KQ6 69 aa14.48□□□□□ -0.09
MAP1LC3B-206ENST00000564844 KRTAP10-9P60411 292 aa14.48□□□□□ -0.09
MAP1LC3B-206ENST00000564844 TMEM243Q9BU79 118 aa14.48□□□□□ -0.09
MAP1LC3B-206ENST00000564844 RPL28P46779 137 aaKnown RBP14.47□□□□□ -0.09
MAP1LC3B-206ENST00000564844 C2orf48Q96LS8 159 aa14.47□□□□□ -0.09
MAP1LC3B-206ENST00000564844 HILS1P60008 231 aa14.46□□□□□ -0.09
MAP1LC3B-206ENST00000564844 RNF152Q8N8N0 203 aa14.45□□□□□ -0.1
MAP1LC3B-206ENST00000564844 PRORYQ9H606 182 aa14.45□□□□□ -0.1
MAP1LC3B-206ENST00000564844 CXCL5P42830 114 aa14.44□□□□□ -0.1
MAP1LC3B-206ENST00000564844 DSCR8Q96T75 97 aa14.44□□□□□ -0.1
MAP1LC3B-206ENST00000564844 LRRC75A-AS1Q8N1F1 130 aa14.44□□□□□ -0.1
MAP1LC3B-206ENST00000564844 A0A096LPF7 62 aa14.43□□□□□ -0.1
MAP1LC3B-206ENST00000564844 XCL1P47992 114 aa14.42□□□□□ -0.1
MAP1LC3B-206ENST00000564844 ITPR2Q14571 2701 aa14.41□□□□□ -0.1
MAP1LC3B-206ENST00000564844 TRGV4A0A0C4DH28 118 aa14.41□□□□□ -0.1
MAP1LC3B-206ENST00000564844 FAM222AQ5U5X8 452 aa14.41□□□□□ -0.1
MAP1LC3B-206ENST00000564844 C6orf226Q5I0X4 101 aa14.4□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 111.9 ms