RNA–Protein interactions for RNA: ENST00000564745.1

CDH1-207, Transcript of cadherin 1, humanhuman

TSL 3

Gene CDH1, Length 581 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-207ENST00000564745 M0R3E3 92 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 BCE1O60756 84 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 P0C880 135 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 ZNF80P51504 273 aaPredicted RBP2.36□□□□□ -2.03
CDH1-207ENST00000564745 NPC2P61916 151 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 CD164Q04900 197 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 Q6JHZ5 121 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 LINC00311Q8N616 119 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 LEAP2Q969E1 77 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 DSCR8Q96T75 97 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 SERP1Q9Y6X1 66 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 SNRNP200O75643 2136 aaKnown RBP2.36□□□□□ -2.03
CDH1-207ENST00000564745 PRR14LQ5THK1 2151 aa2.36□□□□□ -2.03
CDH1-207ENST00000564745 TRAV41A0A0B4J266 112 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 H7C2G1 150 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 I3L3M4 83 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 TIMM17BO60830 172 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 TFF1P04155 84 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 RPL27AP46776 148 aaKnown RBP2.35□□□□□ -2.03
CDH1-207ENST00000564745 TSPEAR-AS2P59090 65 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 RHOHQ15669 191 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 DEFB133Q30KQ1 61 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 KRTAP25-1Q3LHN0 102 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 C10orf55Q5SWW7 151 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 C1orf195Q5TG92 126 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 SPANXN1Q5VSR9 72 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 HCP5Q6MZN7 132 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 BRD3OSQ6XYD6 125 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 SLC25A45Q8N413 288 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 CYSTM1Q9H1C7 97 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 TP53TG1Q9Y2A0 90 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 NCOR2Q9Y618 2525 aa2.35□□□□□ -2.03
CDH1-207ENST00000564745 PTPRSQ13332 1948 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 MYOFQ9NZM1 2061 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 IGKV2-40A0A087WW87 121 aaPredicted RBP2.34□□□□□ -2.03
CDH1-207ENST00000564745 TRGV5A0A0B4J1U4 118 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 IGHV3-21A0A0B4J1V1 117 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 TRAV26-2A0A0B4J265 109 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 FAM236DA0A1B0GTK5 79 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 COX7A2LO14548 114 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 IGKV2D-40P01614 121 aaPredicted RBP2.34□□□□□ -2.03
CDH1-207ENST00000564745 IGHV1-69P01742 117 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 FAM236CP0DP71 79 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 MIAQ16674 131 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 KRTAP21-3Q3LHN1 58 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 C16orf95Q9H693 158 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 ZNF292O60281 2723 aa2.34□□□□□ -2.03
CDH1-207ENST00000564745 NCKAP5O14513 1909 aa2.34□□□□□ -2.04
CDH1-207ENST00000564745 REV3LO60673 3130 aa2.34□□□□□ -2.04
CDH1-207ENST00000564745 NCOA6Q14686 2063 aaPredicted RBP2.33□□□□□ -2.04
CDH1-207ENST00000564745 DNAH12Q6ZR08 3092 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 TNRC6BQ9UPQ9 1833 aaKnown RBP2.33□□□□□ -2.04
CDH1-207ENST00000564745 KIAA0100Q14667 2235 aaKnown RBP2.33□□□□□ -2.04
CDH1-207ENST00000564745 CFAP54Q96N23 3096 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 TRBV6-5A0A0K0K1A5 114 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 TRBV10-3A0A0K0K1G6 114 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 KNCNA6PVL3 124 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 K7EIM0 57 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 K7ERS5 55 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 IGKV4-1P06312 121 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 POLR2KP53803 58 aaKnown RBP2.33□□□□□ -2.04
CDH1-207ENST00000564745 ATP5EP56381 51 aaPredicted RBP2.33□□□□□ -2.04
CDH1-207ENST00000564745 KRTAP10-1P60331 282 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 S100A7L2Q5SY68 101 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 LCE1CQ5T751 118 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 LCE1BQ5T7P3 118 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 ATP5EP2Q5VTU8 51 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 GPHB5Q86YW7 130 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 C1orf158Q8N1D5 194 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 DYNAPQ8N1N2 210 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 Q8TAT8 98 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 C10orf105Q8TEF2 133 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 CLEC2BQ92478 149 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 OBSCN-AS1Q96MR7 158 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 GAFA1Q96PS6 74 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 LAMTOR3Q9UHA4 124 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 PKIGQ9Y2B9 76 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 UBE2D4Q9Y2X8 147 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 LENEPQ9Y5L5 61 aa2.33□□□□□ -2.04
CDH1-207ENST00000564745 GCN1Q92616 2671 aaKnown RBP2.33□□□□□ -2.04
CDH1-207ENST00000564745 NCOR1O75376 2440 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 MYO18BQ8IUG5 2567 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 SPTBN4Q9H254 2564 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 MED12LQ86YW9 2145 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 IGHV1-18A0A0C4DH31 117 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 TRBV27A0A0K0K1C4 114 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 NDUFC1O43677 76 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 IGLV6-57P01721 117 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 BAALC-AS2P0C853 105 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 FAM19A3Q7Z5A8 133 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 CCL13Q99616 98 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 FBN3Q75N90 2809 aa2.32□□□□□ -2.04
CDH1-207ENST00000564745 CNOT1A5YKK6 2376 aaKnown RBP2.32□□□□□ -2.04
CDH1-207ENST00000564745 C5orf42Q9H799 3197 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 IGHV1-58A0A0C4DH39 117 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 FAM223BA6NKX1 122 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 C8orf87E5RJ46 101 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 H7BZZ5 65 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 DNAL4O96015 105 aa2.31□□□□□ -2.04
CDH1-207ENST00000564745 IGHV3-30-3P0DP02 117 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 41.3 ms