RNA–Protein interactions for RNA: ENST00000564674.5

DENND4A-206, Transcript of DENN domain containing 4A, humanhuman

TSL 1 (best)

Gene DENND4A, Length 3,389 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DENND4A-206ENST00000564674 VPREB3Q9UKI3 123 aa13.17□□□□□ -0.3
DENND4A-206ENST00000564674 IGKV3D-7A0A0C4DH55 119 aa13.17□□□□□ -0.3
DENND4A-206ENST00000564674 SLPIP03973 132 aa13.16□□□□□ -0.3
DENND4A-206ENST00000564674 RPL36AP83881 106 aaKnown RBP13.16□□□□□ -0.3
DENND4A-206ENST00000564674 RPL36ALQ969Q0 106 aaKnown RBP13.16□□□□□ -0.3
DENND4A-206ENST00000564674 C9orf129Q5T035 196 aaKnown RBP13.16□□□□□ -0.3
DENND4A-206ENST00000564674 STHQ8IWL8 128 aa13.16□□□□□ -0.3
DENND4A-206ENST00000564674 SDIM1Q6ZPB5 146 aa13.15□□□□□ -0.3
DENND4A-206ENST00000564674 C14orf132Q9NPU4 83 aa13.15□□□□□ -0.3
DENND4A-206ENST00000564674 WFDC10AQ9H1F0 79 aa13.14□□□□□ -0.31
DENND4A-206ENST00000564674 MRPL23Q16540 153 aaKnown RBP13.14□□□□□ -0.31
DENND4A-206ENST00000564674 C5orf38Q86SI9 138 aa13.14□□□□□ -0.31
DENND4A-206ENST00000564674 LINC01356Q8N9X3 169 aa13.14□□□□□ -0.31
DENND4A-206ENST00000564674 TRGV2A0A075B6R0 118 aa13.14□□□□□ -0.31
DENND4A-206ENST00000564674 TIMM17BO60830 172 aa13.13□□□□□ -0.31
DENND4A-206ENST00000564674 EDA2RQ9HAV5 297 aa13.13□□□□□ -0.31
DENND4A-206ENST00000564674 CRPP02741 224 aa13.13□□□□□ -0.31
DENND4A-206ENST00000564674 DNAL4O96015 105 aa13.12□□□□□ -0.31
DENND4A-206ENST00000564674 RPL35AP18077 110 aaKnown RBP13.12□□□□□ -0.31
DENND4A-206ENST00000564674 AKAP9Q99996 3911 aa13.12□□□□□ -0.31
DENND4A-206ENST00000564674 LINC00337Q8N6G1 96 aa13.12□□□□□ -0.31
DENND4A-206ENST00000564674 PPDPFQ9H3Y8 114 aa13.12□□□□□ -0.31
DENND4A-206ENST00000564674 SETXQ7Z333 2677 aaKnown RBP13.12□□□□□ -0.31
DENND4A-206ENST00000564674 A0A087WYN8 130 aa13.12□□□□□ -0.31
DENND4A-206ENST00000564674 IGLV5-39A0A0G2JS06 123 aa13.12□□□□□ -0.31
DENND4A-206ENST00000564674 SND1-IT1Q9HBX3 110 aa13.12□□□□□ -0.31
DENND4A-206ENST00000564674 FAM240AA0A1B0GVK7 77 aa13.11□□□□□ -0.31
DENND4A-206ENST00000564674 C1orf158Q8N1D5 194 aa13.11□□□□□ -0.31
DENND4A-206ENST00000564674 LOC107984640A0A0U1RRK4 108 aa13.11□□□□□ -0.31
DENND4A-206ENST00000564674 RNASE1P07998 156 aaKnown RBP13.11□□□□□ -0.31
DENND4A-206ENST00000564674 CLPSL2Q6UWE3 100 aa13.1□□□□□ -0.31
DENND4A-206ENST00000564674 DNAJC30Q96LL9 226 aa13.1□□□□□ -0.31
DENND4A-206ENST00000564674 TRBV7-7A0A0K0K1E9 115 aa13.1□□□□□ -0.31
DENND4A-206ENST00000564674 PAX4O43316 350 aa13.1□□□□□ -0.31
DENND4A-206ENST00000564674 DEFB114Q30KQ6 69 aa13.1□□□□□ -0.31
DENND4A-206ENST00000564674 PEMTQ9UBM1 199 aa13.1□□□□□ -0.31
DENND4A-206ENST00000564674 GCN1Q92616 2671 aaKnown RBP13.09□□□□□ -0.31
DENND4A-206ENST00000564674 CDC42SE2Q9NRR3 84 aa13.09□□□□□ -0.31
DENND4A-206ENST00000564674 IGLV5-45A0A087WSX0 123 aa13.09□□□□□ -0.31
DENND4A-206ENST00000564674 K7EQD1 137 aa13.09□□□□□ -0.31
DENND4A-206ENST00000564674 ODF3L2Q3SX64 289 aa13.09□□□□□ -0.31
DENND4A-206ENST00000564674 DEFB121Q5J5C9 76 aa13.09□□□□□ -0.31
DENND4A-206ENST00000564674 A0A087WVE0 104 aa13.09□□□□□ -0.31
DENND4A-206ENST00000564674 LINC00643Q86TS7 51 aa13.08□□□□□ -0.32
DENND4A-206ENST00000564674 NCR3O14931 201 aa13.08□□□□□ -0.32
DENND4A-206ENST00000564674 MALP21145 153 aa13.08□□□□□ -0.32
DENND4A-206ENST00000564674 LECT2O14960 151 aa13.07□□□□□ -0.32
DENND4A-206ENST00000564674 C22orf24Q9Y442 160 aa13.07□□□□□ -0.32
DENND4A-206ENST00000564674 SMIM11BQ8TCY0 68 aa13.07□□□□□ -0.32
DENND4A-206ENST00000564674 LINC01600Q96MT4 127 aa13.07□□□□□ -0.32
DENND4A-206ENST00000564674 F5H768 121 aa13.06□□□□□ -0.32
DENND4A-206ENST00000564674 TMEM243Q9BU79 118 aa13.06□□□□□ -0.32
DENND4A-206ENST00000564674 A0A096LPF7 62 aa13.06□□□□□ -0.32
DENND4A-206ENST00000564674 BEAN1Q3B7T3 259 aa13.06□□□□□ -0.32
DENND4A-206ENST00000564674 IGLV4-60A0A075B6I1 120 aa13.06□□□□□ -0.32
DENND4A-206ENST00000564674 FAM110AQ9BQ89 295 aa13.05□□□□□ -0.32
DENND4A-206ENST00000564674 COX7B2Q8TF08 81 aa13.05□□□□□ -0.32
DENND4A-206ENST00000564674 IGKV2-28A0A075B6P5 120 aa13.04□□□□□ -0.32
DENND4A-206ENST00000564674 IGKV2D-28P01615 120 aa13.04□□□□□ -0.32
DENND4A-206ENST00000564674 TRGV4A0A0C4DH28 118 aa13.04□□□□□ -0.32
DENND4A-206ENST00000564674 TRACP01848 142 aa13.04□□□□□ -0.32
DENND4A-206ENST00000564674 ACYP1P07311 99 aa13.04□□□□□ -0.32
DENND4A-206ENST00000564674 PRR3P79522 188 aaKnown RBP13.04□□□□□ -0.32
DENND4A-206ENST00000564674 Q6YL49 198 aa13.04□□□□□ -0.32
DENND4A-206ENST00000564674 ZNF843Q8N446 348 aa13.03□□□□□ -0.32
DENND4A-206ENST00000564674 ITPR2Q14571 2701 aa13.03□□□□□ -0.32
DENND4A-206ENST00000564674 hADV29S1A0JD25 119 aa13.03□□□□□ -0.32
DENND4A-206ENST00000564674 C3orf22Q8N5N4 141 aa13.03□□□□□ -0.32
DENND4A-206ENST00000564674 HIVEP2P31629 2446 aa13.02□□□□□ -0.32
DENND4A-206ENST00000564674 CCL18P55774 89 aa13.02□□□□□ -0.32
DENND4A-206ENST00000564674 COPS9Q8WXC6 57 aa13.02□□□□□ -0.33
DENND4A-206ENST00000564674 DEFB130BP0DP73 79 aa13.01□□□□□ -0.33
DENND4A-206ENST00000564674 DEFB130AP0DP74 79 aa13.01□□□□□ -0.33
DENND4A-206ENST00000564674 KRTAP10-9P60411 292 aa13.01□□□□□ -0.33
DENND4A-206ENST00000564674 WFDC9Q8NEX5 89 aa13.01□□□□□ -0.33
DENND4A-206ENST00000564674 TRAV13-2A0A0B4J235 113 aa13.01□□□□□ -0.33
DENND4A-206ENST00000564674 XCL1P47992 114 aa13.01□□□□□ -0.33
DENND4A-206ENST00000564674 HIST1H4AP62805 103 aaKnown RBP13.01□□□□□ -0.33
DENND4A-206ENST00000564674 INAFM2P0DMQ5 153 aa13□□□□□ -0.33
DENND4A-206ENST00000564674 LINC00846Q9NV44 126 aa12.99□□□□□ -0.33
DENND4A-206ENST00000564674 C6orf226Q5I0X4 101 aa12.99□□□□□ -0.33
DENND4A-206ENST00000564674 CFAP161Q6P656 301 aa12.99□□□□□ -0.33
DENND4A-206ENST00000564674 RNF152Q8N8N0 203 aa12.98□□□□□ -0.33
DENND4A-206ENST00000564674 CYSTM1Q9H1C7 97 aa12.98□□□□□ -0.33
DENND4A-206ENST00000564674 FLNAP21333 2647 aaKnown RBP12.98□□□□□ -0.33
DENND4A-206ENST00000564674 A0A1B0GX51 115 aa12.98□□□□□ -0.33
DENND4A-206ENST00000564674 NBPF19A0A087WUL8 3843 aa12.97□□□□□ -0.33
DENND4A-206ENST00000564674 ZNF469Q96JG9 3925 aaPredicted RBP12.97□□□□□ -0.33
DENND4A-206ENST00000564674 APCP25054 2843 aa12.97□□□□□ -0.33
DENND4A-206ENST00000564674 UQCRQO14949 82 aa12.96□□□□□ -0.34
DENND4A-206ENST00000564674 RPL28P46779 137 aaKnown RBP12.96□□□□□ -0.34
DENND4A-206ENST00000564674 TMEM126AQ9H061 195 aa12.96□□□□□ -0.34
DENND4A-206ENST00000564674 TEP1Q99973 2627 aaKnown RBP12.96□□□□□ -0.34
DENND4A-206ENST00000564674 IGHV4-31P0DP07 118 aa12.95□□□□□ -0.34
DENND4A-206ENST00000564674 C4orf3Q8WVX3 66 aa12.95□□□□□ -0.34
DENND4A-206ENST00000564674 IMUPQ9GZP8 106 aa12.95□□□□□ -0.34
DENND4A-206ENST00000564674 A8MTW9 85 aa12.94□□□□□ -0.34
DENND4A-206ENST00000564674 ESM1Q9NQ30 184 aa12.94□□□□□ -0.34
DENND4A-206ENST00000564674 ITPR3Q14573 2671 aa12.94□□□□□ -0.34
DENND4A-206ENST00000564674 IGLV10-54A0A075B6I4 117 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms