RNA–Protein interactions for RNA: ENST00000564582.2

CHD9-210, Transcript of chromodomain helicase DNA binding protein 9, humanhuman

TSL 3

Gene CHD9, Length 968 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD9-210ENST00000564582 FAM104AQ969W3 186 aa3.9□□□□□ -1.79
CHD9-210ENST00000564582 FAM218AQ96MZ4 157 aa3.9□□□□□ -1.79
CHD9-210ENST00000564582 Q9HAA7 133 aa3.9□□□□□ -1.79
CHD9-210ENST00000564582 CDC42SE2Q9NRR3 84 aa3.9□□□□□ -1.79
CHD9-210ENST00000564582 IGHV3OR16-12A0A075B7B8 117 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 IGHV3OR16-13A0A075B7E8 117 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 IGHV3OR16-8A0A075B7F1 116 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 A0A087WVE0 104 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 IGHV3-74A0A0B4J1X5 117 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 F8WEM9 126 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 NDUFB1O75438 58 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 Q1T7F1 81 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 SOSTDC1Q6X4U4 206 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 C6orf223Q8N319 242 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 LINC00337Q8N6G1 96 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 PKIGQ9Y2B9 76 aa3.89□□□□□ -1.79
CHD9-210ENST00000564582 CHD7Q9P2D1 2997 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 CHD9Q3L8U1 2897 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 A0A1W2PNU3 283 aaPredicted RBP3.88□□□□□ -1.79
CHD9-210ENST00000564582 G3V318 75 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 CCL24O00175 119 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 CCL21O00585 134 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 NCR3O14931 201 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 FUSP35637 526 aaKnown RBP eCLIP3.88□□□□□ -1.79
CHD9-210ENST00000564582 DEFB109BQ30KR1 87 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 Q6ZQT0 140 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 FP248Q71RG6 208 aaPredicted RBP3.88□□□□□ -1.79
CHD9-210ENST00000564582 LINC01560Q8TB33 94 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 TMEM254Q8TBM7 123 aa3.88□□□□□ -1.79
CHD9-210ENST00000564582 MUC4Q99102 2169 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 SDK1Q7Z5N4 2213 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 UTRNP46939 3433 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 IGKV2-28A0A075B6P5 120 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.87□□□□□ -1.79
CHD9-210ENST00000564582 IGHV3-49A0A0A0MS15 119 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 TRBV7-4A0A0J9YYF1 115 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 IGKV2-29A2NJV5 120 aaPredicted RBP3.87□□□□□ -1.79
CHD9-210ENST00000564582 INSP01308 110 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 IGKV2D-28P01615 120 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 SAA4P35542 130 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 NBL1P41271 181 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 CCL18P55774 89 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 HILS1P60008 231 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 UNQ9165/PRO28630Q6UXU0 137 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 NTM-AS1Q6ZSK4 140 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 Q8IZM0 81 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 BPESC1Q9GZL8 116 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 CYSTM1Q9H1C7 97 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 ARRDC1-AS1Q9H2J1 176 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 ICE1Q9Y2F5 2266 aa3.87□□□□□ -1.79
CHD9-210ENST00000564582 NDUFS5O43920 106 aa3.86□□□□□ -1.79
CHD9-210ENST00000564582 IGHV4-59P01825 116 aa3.86□□□□□ -1.79
CHD9-210ENST00000564582 PRB4P10163 310 aaPredicted RBP3.86□□□□□ -1.79
CHD9-210ENST00000564582 DAD1P61803 113 aa3.86□□□□□ -1.79
CHD9-210ENST00000564582 HAMPP81172 84 aa3.86□□□□□ -1.79
CHD9-210ENST00000564582 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP3.86□□□□□ -1.79
CHD9-210ENST00000564582 ZNF318Q5VUA4 2279 aa3.86□□□□□ -1.79
CHD9-210ENST00000564582 ABCA4P78363 2273 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 IGLV9-49A0A0B4J1Y8 123 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 IGHV4-61A0A0C4DH41 118 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 BPY2O14599 106 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 IGHV4-31P0DP07 118 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 COX6A2Q02221 97 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 NREPQ16612 68 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 SPINK13Q1W4C9 94 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 ATP1A1-AS1Q5TC04 95 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 Q6ZVQ6 151 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 FAM19A1Q7Z5A9 133 aa3.85□□□□□ -1.79
CHD9-210ENST00000564582 MRPL55Q7Z7F7 128 aaKnown RBP3.85□□□□□ -1.79
CHD9-210ENST00000564582 CACNA1BQ00975 2339 aa3.84□□□□□ -1.79
CHD9-210ENST00000564582 TPRP12270 2363 aaKnown RBP3.84□□□□□ -1.79
CHD9-210ENST00000564582 ARHGAP32A7KAX9 2087 aa3.84□□□□□ -1.79
CHD9-210ENST00000564582 LY6HO94772 140 aa3.84□□□□□ -1.79
CHD9-210ENST00000564582 UBE2BP63146 152 aa3.84□□□□□ -1.79
CHD9-210ENST00000564582 SS18Q15532 418 aa3.84□□□□□ -1.79
CHD9-210ENST00000564582 C11orf71Q6IPW1 123 aa3.84□□□□□ -1.79
CHD9-210ENST00000564582 LINC00575Q6W349 94 aa3.84□□□□□ -1.79
CHD9-210ENST00000564582 WFDC11Q8NEX6 87 aa3.84□□□□□ -1.79
CHD9-210ENST00000564582 IGHV4-30-2A0A087WSY4 118 aa3.83□□□□□ -1.8
CHD9-210ENST00000564582 IGHV3OR16-9A0A0B4J2B5 98 aa3.83□□□□□ -1.8
CHD9-210ENST00000564582 IGHV3-38A0A0C4DH36 116 aa3.83□□□□□ -1.8
CHD9-210ENST00000564582 A0A0U1RRA0 63 aa3.83□□□□□ -1.8
CHD9-210ENST00000564582 A6NDX4 124 aa3.83□□□□□ -1.8
CHD9-210ENST00000564582 COX7BP24311 80 aa3.83□□□□□ -1.8
CHD9-210ENST00000564582 ELOF1P60002 83 aaKnown RBP3.83□□□□□ -1.8
CHD9-210ENST00000564582 LIMD2Q9BT23 127 aa3.83□□□□□ -1.8
CHD9-210ENST00000564582 CYP4F30PQ9H0H9 118 aa3.83□□□□□ -1.8
CHD9-210ENST00000564582 ESM1Q9NQ30 184 aa3.83□□□□□ -1.8
CHD9-210ENST00000564582 WDR87Q6ZQQ6 2873 aa3.82□□□□□ -1.8
CHD9-210ENST00000564582 LYNX1G3V0Z9 82 aa3.82□□□□□ -1.8
CHD9-210ENST00000564582 H3BPC8 53 aa3.82□□□□□ -1.8
CHD9-210ENST00000564582 IGHV3-11P01762 117 aa3.82□□□□□ -1.8
CHD9-210ENST00000564582 LYNX1P0DP58 116 aa3.82□□□□□ -1.8
CHD9-210ENST00000564582 KRTAP10-7P60409 375 aaPredicted RBP3.82□□□□□ -1.8
CHD9-210ENST00000564582 RNASE13Q5GAN3 156 aaKnown RBP3.82□□□□□ -1.8
CHD9-210ENST00000564582 NOTCH2NLQ7Z3S9 236 aa3.82□□□□□ -1.8
CHD9-210ENST00000564582 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP3.82□□□□□ -1.8
CHD9-210ENST00000564582 RMI2Q96E14 147 aa3.82□□□□□ -1.8
CHD9-210ENST00000564582 UBE2E2Q96LR5 201 aa3.82□□□□□ -1.8
CHD9-210ENST00000564582 LMO4P61968 165 aa3.81□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 61.9 ms