RNA–Protein interactions for RNA: ENST00000564540.5

UBR1-205, Transcript of ubiquitin protein ligase E3 component n-recognin 1, humanhuman

TSL 3

Gene UBR1, Length 735 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR1-205ENST00000564540 PYY3Q5JQD4 70 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 Q6JHZ5 121 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 UBE2DNLQ8IWF7 75 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 HIGD1BQ9P298 99 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 SBF2Q86WG5 1849 aa0.72□□□□□ -2.29
UBR1-205ENST00000564540 ZNF815PA8K554 130 aa0.71□□□□□ -2.3
UBR1-205ENST00000564540 K7EP34 96 aa0.71□□□□□ -2.3
UBR1-205ENST00000564540 TMEM263Q8WUH6 116 aaKnown RBP0.71□□□□□ -2.3
UBR1-205ENST00000564540 LRRC37A2A6NM11 1700 aa0.71□□□□□ -2.3
UBR1-205ENST00000564540 MON2Q7Z3U7 1717 aa0.71□□□□□ -2.3
UBR1-205ENST00000564540 MYO7BQ6PIF6 2116 aa0.71□□□□□ -2.3
UBR1-205ENST00000564540 RAPGEF6Q8TEU7 1601 aa0.71□□□□□ -2.3
UBR1-205ENST00000564540 ARHGEF12Q9NZN5 1544 aa0.7□□□□□ -2.3
UBR1-205ENST00000564540 A0A087WVE0 104 aa0.7□□□□□ -2.3
UBR1-205ENST00000564540 PSMG4Q5JS54 123 aa0.7□□□□□ -2.3
UBR1-205ENST00000564540 C10orf113Q5VZT2 155 aa0.7□□□□□ -2.3
UBR1-205ENST00000564540 SSBP3-AS1Q7Z2R9 100 aa0.7□□□□□ -2.3
UBR1-205ENST00000564540 FDCSPQ8NFU4 85 aa0.7□□□□□ -2.3
UBR1-205ENST00000564540 PLXNB2O15031 1838 aa0.7□□□□□ -2.3
UBR1-205ENST00000564540 PDCD11Q14690 1871 aaKnown RBP0.69□□□□□ -2.3
UBR1-205ENST00000564540 JMJD1CQ15652 2540 aa0.69□□□□□ -2.3
UBR1-205ENST00000564540 MED14O60244 1454 aa0.69□□□□□ -2.3
UBR1-205ENST00000564540 LCN9Q8WX39 176 aa0.69□□□□□ -2.3
UBR1-205ENST00000564540 LINC00846Q9NV44 126 aa0.69□□□□□ -2.3
UBR1-205ENST00000564540 ZFHX3Q15911 3703 aa0.69□□□□□ -2.3
UBR1-205ENST00000564540 WNK3Q9BYP7 1800 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 LRP6O75581 1613 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 LAMC1P11047 1609 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 SCRIBQ14160 1630 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 KDM3BQ7LBC6 1761 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 CADP27708 2225 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 MEGF8Q7Z7M0 2845 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 F8WEM9 126 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 UNC13BO14795 1591 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 BCE1O60756 84 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 ARMS2P0C7Q2 107 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 TDRG1Q3Y452 100 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 EDC4Q6P2E9 1401 aaKnown RBP0.68□□□□□ -2.3
UBR1-205ENST00000564540 S100A16Q96FQ6 103 aaKnown RBP0.68□□□□□ -2.3
UBR1-205ENST00000564540 PSENENQ9NZ42 101 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 ABCC3O15438 1527 aa0.68□□□□□ -2.3
UBR1-205ENST00000564540 ATP10BO94823 1461 aa0.67□□□□□ -2.3
UBR1-205ENST00000564540 ZNF462Q96JM2 2506 aa0.67□□□□□ -2.3
UBR1-205ENST00000564540 CEP162Q5TB80 1403 aa0.67□□□□□ -2.3
UBR1-205ENST00000564540 CYB5AP00167 134 aa0.67□□□□□ -2.3
UBR1-205ENST00000564540 SPINK7P58062 85 aa0.67□□□□□ -2.3
UBR1-205ENST00000564540 CLTCQ00610 1675 aaKnown RBP0.67□□□□□ -2.3
UBR1-205ENST00000564540 EPRSP07814 1512 aaKnown RBP0.67□□□□□ -2.3
UBR1-205ENST00000564540 FANCAO15360 1455 aa0.67□□□□□ -2.3
UBR1-205ENST00000564540 NUP188Q5SRE5 1749 aa0.67□□□□□ -2.3
UBR1-205ENST00000564540 RGPD4Q7Z3J3 1758 aa0.66□□□□□ -2.3
UBR1-205ENST00000564540 ETDBQ3ZM63 59 aa0.66□□□□□ -2.3
UBR1-205ENST00000564540 SPATA8Q6RVD6 105 aa0.66□□□□□ -2.3
UBR1-205ENST00000564540 ZNF720Q7Z2F6 126 aa0.66□□□□□ -2.3
UBR1-205ENST00000564540 LINC01600Q96MT4 127 aa0.66□□□□□ -2.3
UBR1-205ENST00000564540 PLAC8Q9NZF1 115 aa0.66□□□□□ -2.3
UBR1-205ENST00000564540 ASXL3Q9C0F0 2248 aa0.66□□□□□ -2.3
UBR1-205ENST00000564540 PLIN4Q96Q06 1357 aa0.66□□□□□ -2.3
UBR1-205ENST00000564540 POLA1P09884 1462 aaPredicted RBP0.66□□□□□ -2.3
UBR1-205ENST00000564540 C1orf167Q5SNV9 1468 aa0.66□□□□□ -2.3
UBR1-205ENST00000564540 PEA15Q15121 130 aa0.65□□□□□ -2.31
UBR1-205ENST00000564540 DEFB107AQ8IZN7 70 aa0.65□□□□□ -2.31
UBR1-205ENST00000564540 NAV3Q8IVL0 2385 aa0.65□□□□□ -2.31
UBR1-205ENST00000564540 NLRP1Q9C000 1473 aa0.65□□□□□ -2.31
UBR1-205ENST00000564540 ERCC6L2Q5T890 1561 aa0.65□□□□□ -2.31
UBR1-205ENST00000564540 TRBV6-1A0A0K0K1D8 114 aa0.64□□□□□ -2.31
UBR1-205ENST00000564540 HMGN3Q15651 99 aa0.64□□□□□ -2.31
UBR1-205ENST00000564540 CCDC18Q5T9S5 1454 aa0.64□□□□□ -2.31
UBR1-205ENST00000564540 RGPD3A6NKT7 1758 aaPredicted RBP0.64□□□□□ -2.31
UBR1-205ENST00000564540 CACNA1CQ13936 2221 aa0.64□□□□□ -2.31
UBR1-205ENST00000564540 KNDC1Q76NI1 1749 aa0.64□□□□□ -2.31
UBR1-205ENST00000564540 UBR1Q8IWV7 1749 aa0.64□□□□□ -2.31
UBR1-205ENST00000564540 ABCC2Q92887 1545 aa0.64□□□□□ -2.31
UBR1-205ENST00000564540 D6R8Y8 96 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 LEPROTL1O95214 131 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 S100A3P33764 101 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 COX6A2Q02221 97 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 NMSQ5H8A3 153 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 KRTAP19-3Q7Z4W3 81 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 MUSTN1Q8IVN3 82 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 NEXMIFQ5QGS0 1516 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 KCPQ6ZWJ8 1503 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 UACAQ9BZF9 1416 aa0.63□□□□□ -2.31
UBR1-205ENST00000564540 MYH4Q9Y623 1939 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 IQSEC2Q5JU85 1478 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 A0A0D9SFI3 127 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 H0Y9P7 68 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 H3BQF6 201 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 I3L2K1 104 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 HMGN2P05204 90 aaKnown RBP0.62□□□□□ -2.31
UBR1-205ENST00000564540 SMIM11AP58511 58 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 CNFNQ9BYD5 112 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 RABAC1Q9UI14 185 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 MYO3AQ8NEV4 1616 aa0.62□□□□□ -2.31
UBR1-205ENST00000564540 ARHGAP35Q9NRY4 1499 aa0.61□□□□□ -2.31
UBR1-205ENST00000564540 NHSL1Q5SYE7 1610 aa0.61□□□□□ -2.31
UBR1-205ENST00000564540 PPLO60437 1756 aa0.61□□□□□ -2.31
UBR1-205ENST00000564540 LINC00959A0A1B0GUT2 108 aa0.61□□□□□ -2.31
UBR1-205ENST00000564540 WFDC2Q14508 124 aa0.61□□□□□ -2.31
UBR1-205ENST00000564540 ALKAL2Q6UX46 152 aa0.61□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 97.9 ms