RNA–Protein interactions for RNA: ENST00000564260.1

RNF40-206, Transcript of ring finger protein 40, humanhuman

TSL 2

Gene RNF40, Length 768 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-206ENST00000564260 MALP21145 153 aa10.89□□□□□ -0.67
RNF40-206ENST00000564260 PKIGQ9Y2B9 76 aa10.89□□□□□ -0.67
RNF40-206ENST00000564260 F8WDY8 70 aa10.88□□□□□ -0.67
RNF40-206ENST00000564260 ATP5LO75964 103 aa10.88□□□□□ -0.67
RNF40-206ENST00000564260 LINC00242Q5T6M2 205 aa10.88□□□□□ -0.67
RNF40-206ENST00000564260 LINC00173Q6ZV60 143 aa10.88□□□□□ -0.67
RNF40-206ENST00000564260 OR10D4PQ8NGN7 298 aa10.88□□□□□ -0.67
RNF40-206ENST00000564260 HERVK_113P63121 156 aa10.87□□□□□ -0.67
RNF40-206ENST00000564260 BAGE3Q86Y29 109 aa10.87□□□□□ -0.67
RNF40-206ENST00000564260 C9orf163Q8N9P6 203 aa10.87□□□□□ -0.67
RNF40-206ENST00000564260 A0A087WZ39 114 aa10.86□□□□□ -0.67
RNF40-206ENST00000564260 A0A096LNJ9 63 aa10.86□□□□□ -0.67
RNF40-206ENST00000564260 PMVKQ15126 192 aa10.86□□□□□ -0.67
RNF40-206ENST00000564260 PDZD11Q5EBL8 140 aa10.86□□□□□ -0.67
RNF40-206ENST00000564260 ZNF561-AS1K7EIQ3 104 aa10.85□□□□□ -0.67
RNF40-206ENST00000564260 HSBP1O75506 76 aa10.85□□□□□ -0.67
RNF40-206ENST00000564260 SCO1O75880 301 aa10.85□□□□□ -0.67
RNF40-206ENST00000564260 ATP6V1G1O75348 118 aa10.84□□□□□ -0.67
RNF40-206ENST00000564260 C2orf48Q96LS8 159 aa10.84□□□□□ -0.67
RNF40-206ENST00000564260 CST9LQ9H4G1 147 aa10.84□□□□□ -0.67
RNF40-206ENST00000564260 IGHV3-64A0A075B6Q5 118 aa10.83□□□□□ -0.68
RNF40-206ENST00000564260 TINCRA0A1B0GVN0 87 aa10.83□□□□□ -0.68
RNF40-206ENST00000564260 KRTAP10-1P60331 282 aa10.83□□□□□ -0.68
RNF40-206ENST00000564260 Q6ZSA8 131 aa10.83□□□□□ -0.68
RNF40-206ENST00000564260 C5orf38Q86SI9 138 aa10.83□□□□□ -0.68
RNF40-206ENST00000564260 GEMIN7Q9H840 131 aaKnown RBP10.83□□□□□ -0.68
RNF40-206ENST00000564260 IGLV5-45A0A087WSX0 123 aa10.81□□□□□ -0.68
RNF40-206ENST00000564260 HIGD2BQ4VC39 106 aa10.81□□□□□ -0.68
RNF40-206ENST00000564260 SLPIP03973 132 aa10.79□□□□□ -0.68
RNF40-206ENST00000564260 FUSP35637 526 aaKnown RBP eCLIP10.79□□□□□ -0.68
RNF40-206ENST00000564260 COX6A2Q02221 97 aa10.79□□□□□ -0.68
RNF40-206ENST00000564260 SPAG11BQ08648 103 aa10.79□□□□□ -0.68
RNF40-206ENST00000564260 RNF151Q2KHN1 245 aa10.79□□□□□ -0.68
RNF40-206ENST00000564260 IGLV4-69A0A075B6H9 119 aa10.78□□□□□ -0.68
RNF40-206ENST00000564260 TRAV12-1A0A0B4J245 112 aa10.78□□□□□ -0.68
RNF40-206ENST00000564260 SERF1AO75920 110 aa10.78□□□□□ -0.68
RNF40-206ENST00000564260 SYCNQ0VAF6 134 aa10.78□□□□□ -0.68
RNF40-206ENST00000564260 PMCHL1Q16048 86 aa10.78□□□□□ -0.68
RNF40-206ENST00000564260 ZC2HC1BQ5TFG8 222 aa10.78□□□□□ -0.68
RNF40-206ENST00000564260 ORAOV1Q8WV07 137 aa10.78□□□□□ -0.68
RNF40-206ENST00000564260 IFI27L1Q96BM0 104 aa10.78□□□□□ -0.68
RNF40-206ENST00000564260 CARD19Q96LW7 228 aa10.78□□□□□ -0.68
RNF40-206ENST00000564260 PACRGQ96M98 296 aaPredicted RBP10.78□□□□□ -0.68
RNF40-206ENST00000564260 H3BRM9 83 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST1H2BKO60814 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST1H2BJP06899 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 IGLC3P0DOY3 106 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST1H2BOP23527 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST1H2BBP33778 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST1H2BDP58876 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST1H2BCP62807 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST2H2BEQ16778 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.77□□□□□ -0.69
RNF40-206ENST00000564260 SDIM1Q6ZPB5 146 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST1H2BHQ93079 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST1H2BNQ99877 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HIST1H2BMQ99879 126 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 HSPB8Q9UJY1 196 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 KIAA1109Q2LD37 5005 aa10.77□□□□□ -0.69
RNF40-206ENST00000564260 APOBP04114 4563 aaKnown RBP10.76□□□□□ -0.69
RNF40-206ENST00000564260 A0A0J9YXV3 536 aa10.76□□□□□ -0.69
RNF40-206ENST00000564260 LEPROTL1O95214 131 aa10.76□□□□□ -0.69
RNF40-206ENST00000564260 LINC00310P59036 64 aa10.76□□□□□ -0.69
RNF40-206ENST00000564260 CAMK2N2Q96S95 79 aa10.76□□□□□ -0.69
RNF40-206ENST00000564260 MRPL35Q9NZE8 188 aaKnown RBP10.76□□□□□ -0.69
RNF40-206ENST00000564260 LINC00474Q9P2X8 69 aa10.76□□□□□ -0.69
RNF40-206ENST00000564260 CDKN2A-AS1Q9UH64 79 aa10.76□□□□□ -0.69
RNF40-206ENST00000564260 NDUFA1O15239 70 aa10.75□□□□□ -0.69
RNF40-206ENST00000564260 Q8IZM0 81 aa10.75□□□□□ -0.69
RNF40-206ENST00000564260 LINC00469Q8N7U9 141 aa10.75□□□□□ -0.69
RNF40-206ENST00000564260 CXCL5P42830 114 aa10.74□□□□□ -0.69
RNF40-206ENST00000564260 XGP55808 180 aa10.74□□□□□ -0.69
RNF40-206ENST00000564260 CIRBPQ14011 172 aaKnown RBP10.74□□□□□ -0.69
RNF40-206ENST00000564260 COA6Q5JTJ3 125 aaKnown RBP10.74□□□□□ -0.69
RNF40-206ENST00000564260 CHAC1Q9BUX1 264 aa10.74□□□□□ -0.69
RNF40-206ENST00000564260 DNAH8Q96JB1 4490 aa10.73□□□□□ -0.69
RNF40-206ENST00000564260 PRSS2P07478 247 aa10.73□□□□□ -0.69
RNF40-206ENST00000564260 NDUFA6P56556 154 aa10.73□□□□□ -0.69
RNF40-206ENST00000564260 KIAA0087Q14695 138 aa10.73□□□□□ -0.69
RNF40-206ENST00000564260 FAM19A2Q8N3H0 131 aa10.73□□□□□ -0.69
RNF40-206ENST00000564260 RYR1P21817 5038 aa10.73□□□□□ -0.69
RNF40-206ENST00000564260 TRBV30A0A0K0K1B3 111 aa10.72□□□□□ -0.69
RNF40-206ENST00000564260 HSPG2P98160 4391 aa10.72□□□□□ -0.69
RNF40-206ENST00000564260 SMIM1B2RUZ4 78 aa10.71□□□□□ -0.69
RNF40-206ENST00000564260 F8VRH5 84 aa10.71□□□□□ -0.69
RNF40-206ENST00000564260 LINC01620Q4KN68 170 aa10.71□□□□□ -0.69
RNF40-206ENST00000564260 Q6ZRU5 148 aa10.71□□□□□ -0.69
RNF40-206ENST00000564260 FAM30AQ9NZY2 134 aa10.71□□□□□ -0.69
RNF40-206ENST00000564260 CHTOPQ9Y3Y2 248 aaKnown RBP10.71□□□□□ -0.69
RNF40-206ENST00000564260 LOC107984640A0A0U1RRK4 108 aa10.7□□□□□ -0.7
RNF40-206ENST00000564260 TLX1NBP0CAT3 122 aa10.7□□□□□ -0.7
RNF40-206ENST00000564260 C6orf226Q5I0X4 101 aa10.7□□□□□ -0.7
RNF40-206ENST00000564260 LINC00526Q96FQ7 95 aa10.7□□□□□ -0.7
RNF40-206ENST00000564260 CKS1BP61024 79 aa10.69□□□□□ -0.7
RNF40-206ENST00000564260 SFTA2Q6UW10 78 aa10.69□□□□□ -0.7
RNF40-206ENST00000564260 HERC2O95714 4834 aa10.69□□□□□ -0.7
RNF40-206ENST00000564260 NUPR1O60356 82 aa10.68□□□□□ -0.7
RNF40-206ENST00000564260 ZNF22P17026 224 aaPredicted RBP10.68□□□□□ -0.7
RNF40-206ENST00000564260 SPACA4Q8TDM5 124 aa10.68□□□□□ -0.7
RNF40-206ENST00000564260 IGLV5-39A0A0G2JS06 123 aa10.67□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 67.5 ms