RNA–Protein interactions for RNA: ENST00000564172.1

GDE1-203, Transcript of glycerophosphodiester phosphodiesterase 1, humanhuman

TSL 1 (best)

Gene GDE1, Length 2,238 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDE1-203ENST00000564172 KIF25-AS1Q9Y6Z4 181 aa12.73□□□□□ -0.37
GDE1-203ENST00000564172 C2orf82Q6UX34 121 aa12.73□□□□□ -0.37
GDE1-203ENST00000564172 SLC25A29Q8N8R3 303 aa12.72□□□□□ -0.37
GDE1-203ENST00000564172 LINC00315P59091 139 aa12.72□□□□□ -0.37
GDE1-203ENST00000564172 TRAV26-2A0A0B4J265 109 aa12.71□□□□□ -0.37
GDE1-203ENST00000564172 TRBV30A0A0K0K1B3 111 aa12.71□□□□□ -0.37
GDE1-203ENST00000564172 GATA1P15976 413 aaPredicted RBP12.71□□□□□ -0.37
GDE1-203ENST00000564172 HIST1H4AP62805 103 aaKnown RBP12.71□□□□□ -0.37
GDE1-203ENST00000564172 PYGO1Q9Y3Y4 419 aa12.71□□□□□ -0.37
GDE1-203ENST00000564172 OXTP01178 125 aa12.7□□□□□ -0.38
GDE1-203ENST00000564172 KRTAP10-11P60412 298 aa12.7□□□□□ -0.38
GDE1-203ENST00000564172 EGFEM1PQ0D2K5 195 aa12.7□□□□□ -0.38
GDE1-203ENST00000564172 SDIM1Q6ZPB5 146 aa12.7□□□□□ -0.38
GDE1-203ENST00000564172 MDFIQ99750 246 aa12.7□□□□□ -0.38
GDE1-203ENST00000564172 A0A087WWL8 130 aa12.7□□□□□ -0.38
GDE1-203ENST00000564172 TMEM263Q8WUH6 116 aaKnown RBP12.7□□□□□ -0.38
GDE1-203ENST00000564172 MGPP08493 103 aa12.69□□□□□ -0.38
GDE1-203ENST00000564172 PIK3CD-AS1Q5SR53 167 aa12.69□□□□□ -0.38
GDE1-203ENST00000564172 NEXN-AS1Q8NBZ9 246 aa12.69□□□□□ -0.38
GDE1-203ENST00000564172 V9GYY9 64 aa12.69□□□□□ -0.38
GDE1-203ENST00000564172 hADV29S1A0JD25 119 aa12.68□□□□□ -0.38
GDE1-203ENST00000564172 HERVK_113P61574 105 aa12.68□□□□□ -0.38
GDE1-203ENST00000564172 IL17DQ8TAD2 202 aa12.68□□□□□ -0.38
GDE1-203ENST00000564172 C1orf43Q9BWL3 253 aa12.68□□□□□ -0.38
GDE1-203ENST00000564172 FAM74A4Q5TZK3 123 aa12.68□□□□□ -0.38
GDE1-203ENST00000564172 NRACQ8N912 160 aa12.68□□□□□ -0.38
GDE1-203ENST00000564172 PKD1L1Q8TDX9 2849 aa12.68□□□□□ -0.38
GDE1-203ENST00000564172 TRAV13-1A0A0B4J241 112 aa12.67□□□□□ -0.38
GDE1-203ENST00000564172 H7C423 109 aa12.67□□□□□ -0.38
GDE1-203ENST00000564172 IGHV4-30-4P0DP06 118 aa12.67□□□□□ -0.38
GDE1-203ENST00000564172 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.66□□□□□ -0.38
GDE1-203ENST00000564172 APOC4P55056 127 aa12.66□□□□□ -0.38
GDE1-203ENST00000564172 C16orf74Q96GX8 76 aa12.66□□□□□ -0.38
GDE1-203ENST00000564172 CMYA5Q8N3K9 4069 aa12.66□□□□□ -0.38
GDE1-203ENST00000564172 PAPPA-AS1Q5QFB9 102 aa12.65□□□□□ -0.38
GDE1-203ENST00000564172 PLAC8L1A1L4L8 177 aa12.65□□□□□ -0.38
GDE1-203ENST00000564172 F5H697 171 aa12.65□□□□□ -0.38
GDE1-203ENST00000564172 ZNF22P17026 224 aaPredicted RBP12.65□□□□□ -0.38
GDE1-203ENST00000564172 SUMO4Q6EEV6 95 aa12.64□□□□□ -0.39
GDE1-203ENST00000564172 DAZ2Q13117 558 aaKnown RBP12.64□□□□□ -0.39
GDE1-203ENST00000564172 RPL39LQ96EH5 51 aaKnown RBP12.64□□□□□ -0.39
GDE1-203ENST00000564172 NDUFC2-KCTD14E9PQ53 114 aa12.63□□□□□ -0.39
GDE1-203ENST00000564172 NOP10Q9NPE3 64 aaKnown RBP12.63□□□□□ -0.39
GDE1-203ENST00000564172 ANK2Q01484 3957 aa12.63□□□□□ -0.39
GDE1-203ENST00000564172 TRGV1A0A0A0MS02 117 aa12.62□□□□□ -0.39
GDE1-203ENST00000564172 TOMM6Q96B49 74 aa12.62□□□□□ -0.39
GDE1-203ENST00000564172 UPK3BQ9BT76 320 aa12.62□□□□□ -0.39
GDE1-203ENST00000564172 X6R8D5 127 aa12.62□□□□□ -0.39
GDE1-203ENST00000564172 J3QQQ9 107 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 PFN2P35080 140 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 DEFB135Q30KP9 77 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 Q6ZTI0 123 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 IGHV3-73A0A0B4J1V6 119 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 PPP1R17O96001 155 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 ORMDL2Q53FV1 153 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 SCGB3A1Q96QR1 104 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 DSCR8Q96T75 97 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 OVOL2Q9BRP0 275 aa12.61□□□□□ -0.39
GDE1-203ENST00000564172 M0QY20 66 aa12.6□□□□□ -0.39
GDE1-203ENST00000564172 SUMO2P61956 95 aaKnown RBP12.6□□□□□ -0.39
GDE1-203ENST00000564172 LINC00336Q6ZUF6 198 aa12.6□□□□□ -0.39
GDE1-203ENST00000564172 SERP2Q8N6R1 65 aa12.6□□□□□ -0.39
GDE1-203ENST00000564172 A8MZ25 164 aa12.59□□□□□ -0.39
GDE1-203ENST00000564172 EIF4EBP3O60516 100 aaPredicted RBP12.59□□□□□ -0.39
GDE1-203ENST00000564172 EPM2AB3EWF7 344 aa12.58□□□□□ -0.39
GDE1-203ENST00000564172 COX6CP09669 75 aa12.58□□□□□ -0.39
GDE1-203ENST00000564172 SMIM2Q9BVW6 85 aa12.58□□□□□ -0.4
GDE1-203ENST00000564172 NACAE9PAV3 2078 aa12.58□□□□□ -0.4
GDE1-203ENST00000564172 RPL18AQ02543 176 aaKnown RBP12.57□□□□□ -0.4
GDE1-203ENST00000564172 Q1RN00 199 aa12.57□□□□□ -0.4
GDE1-203ENST00000564172 CYSTM1Q9H1C7 97 aa12.57□□□□□ -0.4
GDE1-203ENST00000564172 NBEAL2Q6ZNJ1 2754 aa12.57□□□□□ -0.4
GDE1-203ENST00000564172 TMEM223A0PJW6 202 aa12.57□□□□□ -0.4
GDE1-203ENST00000564172 TRIAP1O43715 76 aa12.57□□□□□ -0.4
GDE1-203ENST00000564172 SMCR5Q8TEV8 140 aa12.57□□□□□ -0.4
GDE1-203ENST00000564172 Q6ZSN1 163 aa12.56□□□□□ -0.4
GDE1-203ENST00000564172 TRBV6-5A0A0K0K1A5 114 aa12.56□□□□□ -0.4
GDE1-203ENST00000564172 POLR2KP53803 58 aaKnown RBP12.55□□□□□ -0.4
GDE1-203ENST00000564172 LST1O00453 97 aa12.54□□□□□ -0.4
GDE1-203ENST00000564172 IGHV3-53P01767 116 aa12.54□□□□□ -0.4
GDE1-203ENST00000564172 NOTCH1P46531 2555 aa12.54□□□□□ -0.4
GDE1-203ENST00000564172 TRGV2A0A075B6R0 118 aa12.53□□□□□ -0.4
GDE1-203ENST00000564172 SDHAF1A6NFY7 115 aa12.53□□□□□ -0.4
GDE1-203ENST00000564172 AMELXQ99217 191 aa12.53□□□□□ -0.4
GDE1-203ENST00000564172 NDUFC2O95298 119 aa12.53□□□□□ -0.4
GDE1-203ENST00000564172 PKIGQ9Y2B9 76 aa12.53□□□□□ -0.4
GDE1-203ENST00000564172 C11orf86A6NJI1 115 aa12.52□□□□□ -0.41
GDE1-203ENST00000564172 Q9UF83 564 aa12.52□□□□□ -0.41
GDE1-203ENST00000564172 H7C2G1 150 aa12.52□□□□□ -0.41
GDE1-203ENST00000564172 ICOSQ9Y6W8 199 aa12.52□□□□□ -0.41
GDE1-203ENST00000564172 MGAM2Q2M2H8 2515 aa12.51□□□□□ -0.41
GDE1-203ENST00000564172 IGHV4-28A0A0C4DH34 117 aa12.51□□□□□ -0.41
GDE1-203ENST00000564172 TRBV27A0A0K0K1C4 114 aa12.51□□□□□ -0.41
GDE1-203ENST00000564172 VCYO14598 125 aa12.51□□□□□ -0.41
GDE1-203ENST00000564172 MIFP14174 115 aa12.51□□□□□ -0.41
GDE1-203ENST00000564172 C1orf195Q5TG92 126 aa12.51□□□□□ -0.41
GDE1-203ENST00000564172 LINC00612Q8N6U2 182 aa12.51□□□□□ -0.41
GDE1-203ENST00000564172 DNAH3Q8TD57 4116 aa12.51□□□□□ -0.41
GDE1-203ENST00000564172 Q8NAQ8 132 aa12.5□□□□□ -0.41
GDE1-203ENST00000564172 DEFB4AO15263 64 aa12.5□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms