RNA–Protein interactions for RNA: ENST00000563573.5

CDR2-203, Transcript of cerebellar degeneration related protein 2, humanhuman

TSL 4

Gene CDR2, Length 556 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDR2-203ENST00000563573 VCX2Q9H322 139 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 PYGO1Q9Y3Y4 419 aa3.17□□□□□ -1.9
CDR2-203ENST00000563573 TRAV9-2A0A087WT02 112 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 C20orf202A1L168 122 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 H0Y8G0 127 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 LINC00694P0DN24 101 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 KRTDAPP60985 99 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 GAGE6Q13070 117 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 ESRGQ1W209 222 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 PET117Q6UWS5 81 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 OR5A1Q8NGJ0 315 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 TIMM17AQ99595 171 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 C2orf88Q9BSF0 95 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 CHCHD7Q9BUK0 85 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 SPANXA1Q9NS26 97 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 CSDC2Q9Y534 153 aaKnown RBP3.16□□□□□ -1.9
CDR2-203ENST00000563573 VPS13DQ5THJ4 4388 aa3.16□□□□□ -1.9
CDR2-203ENST00000563573 DNAH1Q9P2D7 4330 aa3.15□□□□□ -1.9
CDR2-203ENST00000563573 STAB2Q8WWQ8 2551 aa3.15□□□□□ -1.9
CDR2-203ENST00000563573 LYSTQ99698 3801 aa3.15□□□□□ -1.9
CDR2-203ENST00000563573 STARD9Q9P2P6 4700 aa3.15□□□□□ -1.9
CDR2-203ENST00000563573 A0A096LNJ9 63 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 TRAV12-1A0A0B4J245 112 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 LOC105371267A0A1B0GV96 52 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 IGIPA6NJ69 53 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 SYS1-DBNDD2H3BUS1 97 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 CCL25O15444 150 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 C3orf79P0CE67 100 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 FGF6P10767 208 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 SEC11AP67812 179 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 MRPS36P82909 103 aaKnown RBP3.15□□□□□ -1.91
CDR2-203ENST00000563573 PMVKQ15126 192 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 LGALS9CQ6DKI2 356 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 TEX43Q6ZNM6 134 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 SPATA12Q7Z6I5 190 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 MRPL52Q86TS9 123 aaKnown RBP3.15□□□□□ -1.91
CDR2-203ENST00000563573 UBE2DNLQ8IWF7 75 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 ZNF664Q8N3J9 261 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 MUC7Q8TAX7 377 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 APLNQ9ULZ1 77 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 UBE2D4Q9Y2X8 147 aa3.15□□□□□ -1.91
CDR2-203ENST00000563573 IGLV4-3A0A075B6K6 122 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 HSBP1L1C9JCN9 74 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 C3orf84H3BNL1 204 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 SIVA1O15304 175 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 ANGP03950 147 aaKnown RBP3.14□□□□□ -1.91
CDR2-203ENST00000563573 RBX1P62877 108 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 S100A12P80511 92 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 JOSD1Q15040 202 aaPredicted RBP3.14□□□□□ -1.91
CDR2-203ENST00000563573 SS18Q15532 418 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 ZFAND6Q6FIF0 208 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 CFAP161Q6P656 301 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 LINC00173Q6ZV60 143 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 BAALCQ8WXS3 180 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 CDC42SE2Q9NRR3 84 aa3.14□□□□□ -1.91
CDR2-203ENST00000563573 CHTOPQ9Y3Y2 248 aaKnown RBP3.14□□□□□ -1.91
CDR2-203ENST00000563573 K7EP13 123 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 DPM2O94777 84 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 IGKCP01834 107 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 CRPP02741 224 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 PLNP26678 52 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 LINC00269Q8N2A0 174 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 Q8N976 141 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 AMELXQ99217 191 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 OPRPNQ99935 248 aaPredicted RBP3.13□□□□□ -1.91
CDR2-203ENST00000563573 CST9LQ9H4G1 147 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 Q9H8V8 135 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 MRPS16Q9Y3D3 137 aaKnown RBP3.13□□□□□ -1.91
CDR2-203ENST00000563573 LINC00588Q9Y4M8 146 aa3.13□□□□□ -1.91
CDR2-203ENST00000563573 IGLV4-60A0A075B6I1 120 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 TRAV13-1A0A0B4J241 112 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 TRAV8-4A0A0B4J246 113 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 IGKV3OR2-268A0A0C4DH90 116 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 TINCRA0A1B0GVN0 87 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 F8VRH5 84 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 IGHV3-30P01768 117 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 IGHV3-33P01772 117 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 IGHV3-30-3P0DP02 117 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 IGHV3-30-5P0DP03 117 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 HERVK_113P63121 156 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 RPL24P83731 157 aaKnown RBP3.12□□□□□ -1.91
CDR2-203ENST00000563573 UBE2V1Q13404 147 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 MPV17L2Q567V2 206 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 RNASE13Q5GAN3 156 aaKnown RBP3.12□□□□□ -1.91
CDR2-203ENST00000563573 LINC01556Q5JQF7 62 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 LINC01545Q5VT33 79 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 Q6ZUT4 128 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 C10orf126Q8N4M7 172 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 UPK3BQ9BT76 320 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 GEMIN7Q9H840 131 aaKnown RBP3.12□□□□□ -1.91
CDR2-203ENST00000563573 MRPL35Q9NZE8 188 aaKnown RBP3.12□□□□□ -1.91
CDR2-203ENST00000563573 KLK12Q9UKR0 248 aa3.12□□□□□ -1.91
CDR2-203ENST00000563573 TRAV8-3A0A0A6YYJ7 113 aa3.11□□□□□ -1.91
CDR2-203ENST00000563573 A0A0J9YXV3 536 aa3.11□□□□□ -1.91
CDR2-203ENST00000563573 LINC00959A0A1B0GUT2 108 aa3.11□□□□□ -1.91
CDR2-203ENST00000563573 H3BRM9 83 aa3.11□□□□□ -1.91
CDR2-203ENST00000563573 DNAH10OSP0CZ25 163 aa3.11□□□□□ -1.91
CDR2-203ENST00000563573 SMIM6P0DI80 62 aa3.11□□□□□ -1.91
CDR2-203ENST00000563573 UBE2D1P51668 147 aa3.11□□□□□ -1.91
CDR2-203ENST00000563573 HERVK_113P61574 105 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 81.8 ms