RNA–Protein interactions for RNA: ENST00000563092.1

CKLF-208, Transcript of chemokine like factor, human

TSL 3

Gene CKLF, Length 365 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CKLF-208	ENST00000563092	TSPAN13	O95857	204 aa		4.86	□□□□□ -1.63
CKLF-208	ENST00000563092	C5orf38	Q86SI9	138 aa		4.86	□□□□□ -1.63
CKLF-208	ENST00000563092	SMDT1	Q9H4I9	107 aa		4.86	□□□□□ -1.63
CKLF-208	ENST00000563092	BIN3	Q9NQY0	253 aa		4.86	□□□□□ -1.63
CKLF-208	ENST00000563092	UBE2D4	Q9Y2X8	147 aa		4.86	□□□□□ -1.63
CKLF-208	ENST00000563092	FSIP2	Q5CZC0	6907 aa		4.86	□□□□□ -1.63
CKLF-208	ENST00000563092	IGHV3OR16-9	A0A0B4J2B5	98 aa		4.85	□□□□□ -1.63
CKLF-208	ENST00000563092	C7orf77	A4D0Y5	90 aa		4.85	□□□□□ -1.63
CKLF-208	ENST00000563092		M0QXV9	152 aa		4.85	□□□□□ -1.63
CKLF-208	ENST00000563092	ARPC5	O15511	151 aa		4.85	□□□□□ -1.63
CKLF-208	ENST00000563092	ZNF345	Q14585	488 aa		4.85	□□□□□ -1.63
CKLF-208	ENST00000563092	TMEM241	Q24JQ0	296 aa		4.85	□□□□□ -1.63
CKLF-208	ENST00000563092	FAM19A5	Q7Z5A7	132 aa	Predicted RBP	4.85	□□□□□ -1.63
CKLF-208	ENST00000563092	FAM104A	Q969W3	186 aa		4.85	□□□□□ -1.63
CKLF-208	ENST00000563092	ST20	Q9HBF5	79 aa		4.85	□□□□□ -1.63
CKLF-208	ENST00000563092	C6orf48	Q9UBA6	75 aa		4.85	□□□□□ -1.63
CKLF-208	ENST00000563092	PDE6D	O43924	150 aa		4.84	□□□□□ -1.63
CKLF-208	ENST00000563092	SMIM15	Q7Z3B0	74 aa		4.84	□□□□□ -1.63
CKLF-208	ENST00000563092	TIMM21	Q9BVV7	248 aa		4.84	□□□□□ -1.63
CKLF-208	ENST00000563092	CDIP1	Q9H305	208 aa		4.84	□□□□□ -1.63
CKLF-208	ENST00000563092	GNG13	Q9P2W3	67 aa		4.84	□□□□□ -1.63
CKLF-208	ENST00000563092	TRAV13-1	A0A0B4J241	112 aa		4.83	□□□□□ -1.64
CKLF-208	ENST00000563092		K7EN84	100 aa		4.83	□□□□□ -1.64
CKLF-208	ENST00000563092	NDUFA1	O15239	70 aa		4.83	□□□□□ -1.64
CKLF-208	ENST00000563092	CTAG1A	P78358	180 aa		4.83	□□□□□ -1.64
CKLF-208	ENST00000563092	KIAA0087	Q14695	138 aa		4.83	□□□□□ -1.64
CKLF-208	ENST00000563092	RNASE13	Q5GAN3	156 aa	Known RBP	4.83	□□□□□ -1.64
CKLF-208	ENST00000563092	C9orf129	Q5T035	196 aa	Known RBP	4.83	□□□□□ -1.64
CKLF-208	ENST00000563092	UNQ6190/PRO20217	Q6UXQ8	127 aa		4.83	□□□□□ -1.64
CKLF-208	ENST00000563092	C9orf118	A6NHY6	69 aa		4.82	□□□□□ -1.64
CKLF-208	ENST00000563092	UBE2B	P63146	152 aa		4.82	□□□□□ -1.64
CKLF-208	ENST00000563092		Q6ZUT4	128 aa		4.82	□□□□□ -1.64
CKLF-208	ENST00000563092	ORAOV1	Q8WV07	137 aa		4.82	□□□□□ -1.64
CKLF-208	ENST00000563092	NDUFC2-KCTD14	E9PQ53	114 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	VCY	O14598	125 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	NUPR1	O60356	82 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	CRYGA	P11844	174 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	RAB4A	P20338	218 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	SMAGP	Q0VAQ4	97 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	GAGE2E	Q4V326	116 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	KRTAP13-2	Q52LG2	175 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	LINC00242	Q5T6M2	205 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	NRAC	Q8N912	160 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	OCC1	Q8TAD7	63 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	TYMSOS	Q8TAI1	123 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	TMEM191A	Q9H0A3	160 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	MED9	Q9NWA0	146 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	GAGE2D	Q9UEU5	116 aa		4.81	□□□□□ -1.64
CKLF-208	ENST00000563092	TRBV30	A0A0K0K1B3	111 aa		4.8	□□□□□ -1.64
CKLF-208	ENST00000563092	HMSD	A8MTL9	139 aa		4.8	□□□□□ -1.64
CKLF-208	ENST00000563092	CT83	Q5H943	113 aa		4.8	□□□□□ -1.64
CKLF-208	ENST00000563092	FAM231D	Q6ZW35	169 aa		4.8	□□□□□ -1.64
CKLF-208	ENST00000563092	RETNLB	Q9BQ08	111 aa		4.8	□□□□□ -1.64
CKLF-208	ENST00000563092	IGLV7-46	A0A075B6I9	117 aa		4.79	□□□□□ -1.64
CKLF-208	ENST00000563092	MRPS36	P82909	103 aa	Known RBP	4.79	□□□□□ -1.64
CKLF-208	ENST00000563092	CTDSP1	Q9GZU7	261 aa		4.79	□□□□□ -1.64
CKLF-208	ENST00000563092		A8MWL6	223 aa		4.78	□□□□□ -1.64
CKLF-208	ENST00000563092	SMLR1	H3BR10	107 aa		4.78	□□□□□ -1.64
CKLF-208	ENST00000563092	FCER1G	P30273	86 aa		4.78	□□□□□ -1.64
CKLF-208	ENST00000563092	SUMO2	P61956	95 aa	Known RBP	4.78	□□□□□ -1.64
CKLF-208	ENST00000563092	RPL32	P62910	135 aa	Known RBP	4.78	□□□□□ -1.64
CKLF-208	ENST00000563092	KRTAP13-1	Q8IUC0	172 aa		4.78	□□□□□ -1.64
CKLF-208	ENST00000563092	AMN1	Q8IY45	258 aa		4.78	□□□□□ -1.64
CKLF-208	ENST00000563092	KRTAP4-1	Q9BYQ7	146 aa		4.78	□□□□□ -1.64
CKLF-208	ENST00000563092	C22orf24	Q9Y442	160 aa		4.78	□□□□□ -1.64
CKLF-208	ENST00000563092		A0A1B0GUT8	65 aa		4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	BCE1	O60756	84 aa		4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	PPP1R17	O96001	155 aa		4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	RPL28	P46779	137 aa	Known RBP	4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	LINC01547	P58512	204 aa	Predicted RBP	4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	ASB16-AS1	Q495Z4	193 aa		4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	FAM229B	Q4G0N7	80 aa		4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	LINC00173	Q6ZV60	143 aa		4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	KIR2DL4	Q99706	377 aa		4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	TP73-AS1	Q9UF72	201 aa		4.77	□□□□□ -1.65
CKLF-208	ENST00000563092	TRBV24-1	A0A075B6N3	115 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	KANTR	A0A1W2PQU2	76 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	SMKR1	H3BMG3	65 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	TEX46	H3BTG2	121 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	GATC	O43716	136 aa	Known RBP	4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	TAGLN2	P37802	199 aa	Known RBP	4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	RPL39	P62891	51 aa	Known RBP	4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	LBH	Q53QV2	105 aa	Predicted RBP	4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	C2orf82	Q6UX34	121 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	LINC01561	Q8N1V8	128 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	LINC00304	Q8N9R0	145 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	TMEM18	Q96B42	140 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	SPANXA1	Q9NS26	97 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	ANAPC11	Q9NYG5	84 aa		4.76	□□□□□ -1.65
CKLF-208	ENST00000563092	HIGD1C	A8MV81	97 aa		4.75	□□□□□ -1.65
CKLF-208	ENST00000563092	PPP1R2P9	O14990	202 aa		4.75	□□□□□ -1.65
CKLF-208	ENST00000563092	PACRG	Q96M98	296 aa	Predicted RBP	4.75	□□□□□ -1.65
CKLF-208	ENST00000563092	C20orf78	Q9BR46	151 aa		4.75	□□□□□ -1.65
CKLF-208	ENST00000563092	PPDPF	Q9H3Y8	114 aa		4.75	□□□□□ -1.65
CKLF-208	ENST00000563092	ZNF727	A8MUV8	499 aa		4.74	□□□□□ -1.65
CKLF-208	ENST00000563092	TCAP	O15273	167 aa		4.74	□□□□□ -1.65
CKLF-208	ENST00000563092	HBB	P68871	147 aa		4.74	□□□□□ -1.65
CKLF-208	ENST00000563092	MRPL55	Q7Z7F7	128 aa	Known RBP	4.74	□□□□□ -1.65
CKLF-208	ENST00000563092	BORCS7	Q96B45	105 aa		4.74	□□□□□ -1.65
CKLF-208	ENST00000563092	TGIF2-C20orf24	A0A0A6YYL0	155 aa		4.73	□□□□□ -1.65

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