RNA–Protein interactions for RNA: ENST00000562668.1

SMG1-206, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 3

Gene SMG1, Length 449 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-206ENST00000562668 D6R8Y8 96 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 SNAPINO95295 136 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 NPYP01303 97 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 RPL32P62910 135 aaKnown RBP2.97□□□□□ -1.93
SMG1-206ENST00000562668 Q1RN00 199 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 MPV17L2Q567V2 206 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 OR10J3Q5JRS4 329 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 KRTAP26-1Q6PEX3 210 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 SMIM15Q7Z3B0 74 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 SVBPQ8N300 66 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 DEFB104AQ8WTQ1 72 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 FAM104AQ969W3 186 aa2.97□□□□□ -1.93
SMG1-206ENST00000562668 ALKBH7Q9BT30 221 aaPredicted RBP2.97□□□□□ -1.93
SMG1-206ENST00000562668 HSPG2P98160 4391 aa2.96□□□□□ -1.93
SMG1-206ENST00000562668 TGIF2-C20orf24A0A0A6YYL0 155 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 TRAV8-6A0A0B4J262 113 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 I3L3M4 83 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 K7EP13 123 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 IGHV3-30P01768 117 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 IGHV3-33P01772 117 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 S100A8P05109 93 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 IGHV3-30-3P0DP02 117 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 IGHV3-30-5P0DP03 117 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 LAGE3Q14657 143 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 NDUFA5Q16718 116 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 TMEM97Q5BJF2 176 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 TTC32Q5I0X7 151 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 ENHOQ6UWT2 76 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 Q6ZVQ6 151 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 C6orf223Q8N319 242 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 C20orf203Q8NBC4 194 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 C20orf78Q9BR46 151 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 GNB1LQ9BYB4 327 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 ST20Q9HBF5 79 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 URGCP-MRPS24S4R325 110 aa2.96□□□□□ -1.94
SMG1-206ENST00000562668 ABCA13Q86UQ4 5058 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 FAT1Q14517 4588 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 IGLV4-60A0A075B6I1 120 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 TRBV25-1A0A075B6N4 114 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 IGHV1-24A0A0C4DH33 117 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 LRCOL1A6NCL2 159 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 LINC01546A6NGU7 62 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 PPBPP02775 128 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 CKS2P33552 79 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 RBX1P62877 108 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 COTL1Q14019 142 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 C1orf134Q5TEV5 83 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 KCNIP4Q6PIL6 250 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 CBLN2Q8IUK8 224 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 ORMDL3Q8N138 153 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 Q8N976 141 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 PRELID3AQ96N28 172 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 SMIM2Q9BVW6 85 aa2.95□□□□□ -1.94
SMG1-206ENST00000562668 IGKV2D-29A0A075B6S2 120 aaPredicted RBP2.94□□□□□ -1.94
SMG1-206ENST00000562668 TRAV9-2A0A087WT02 112 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 IGKV2-29A2NJV5 120 aaPredicted RBP2.94□□□□□ -1.94
SMG1-206ENST00000562668 COLCA2A8K830 154 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 PPP1R17O96001 155 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 HLA-DQA1P01909 254 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 APCSP02743 223 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 PMCHP20382 165 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 S100PP25815 95 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 WFDC2Q14508 124 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 COX19Q49B96 90 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 LINC00336Q6ZUF6 198 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 MRPL52Q86TS9 123 aaKnown RBP2.94□□□□□ -1.94
SMG1-206ENST00000562668 C10orf126Q8N4M7 172 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 Q8N8P6 123 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 TMEM243Q9BU79 118 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 KLK12Q9UKR0 248 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 LAMTOR2Q9Y2Q5 125 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 UBE2D4Q9Y2X8 147 aa2.94□□□□□ -1.94
SMG1-206ENST00000562668 A0A087WX48 190 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 A0A096LNJ9 63 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 TCAPO15273 167 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 SCO1O75880 301 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 MT-ND6P03923 174 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 FGF6P10767 208 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 IFI27P40305 119 aaPredicted RBP2.93□□□□□ -1.94
SMG1-206ENST00000562668 LINC00269Q8N2A0 174 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 TIMM21Q9BVV7 248 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 SMCO4Q9NRQ5 59 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 CDC42SE2Q9NRR3 84 aa2.93□□□□□ -1.94
SMG1-206ENST00000562668 CSDC2Q9Y534 153 aaKnown RBP2.93□□□□□ -1.94
SMG1-206ENST00000562668 A0A087WTM6 91 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 TRAV8-3A0A0A6YYJ7 113 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 LOC389332A0A1B0GUA5 103 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 FAM168BA1KXE4 195 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 C5orf52A6NGY3 159 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 TMEM262E9PQX1 116 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 ZNF25P17030 456 aaPredicted RBP2.92□□□□□ -1.94
SMG1-206ENST00000562668 PKIAP61925 76 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 RPL39P62891 51 aaKnown RBP2.92□□□□□ -1.94
SMG1-206ENST00000562668 REG3AQ06141 175 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 FABP9Q0Z7S8 132 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 LBHQ53QV2 105 aaPredicted RBP2.92□□□□□ -1.94
SMG1-206ENST00000562668 SREK1IP1Q8N9Q2 155 aaPredicted RBP2.92□□□□□ -1.94
SMG1-206ENST00000562668 C18orf32Q8TCD1 76 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 UBE2WQ96B02 151 aa2.92□□□□□ -1.94
SMG1-206ENST00000562668 KIR2DL4Q99706 377 aa2.92□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms