RNA–Protein interactions for RNA: ENST00000562084.5

BBS4-204, Transcript of Bardet-Biedl syndrome 4, humanhuman

TSL 1 (best)

Gene BBS4, Length 1,864 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BBS4-204ENST00000562084 CRYGAP11844 174 aa13.4□□□□□ -0.26
BBS4-204ENST00000562084 MALP21145 153 aa13.4□□□□□ -0.26
BBS4-204ENST00000562084 C11orf72Q8NBR9 251 aa13.4□□□□□ -0.26
BBS4-204ENST00000562084 MAPK1IP1LQ8NDC0 245 aa13.4□□□□□ -0.26
BBS4-204ENST00000562084 C22orf24Q9Y442 160 aa13.4□□□□□ -0.26
BBS4-204ENST00000562084 Q9UF83 564 aa13.39□□□□□ -0.27
BBS4-204ENST00000562084 IGHV3-38A0A0C4DH36 116 aa13.38□□□□□ -0.27
BBS4-204ENST00000562084 DEFB131AP59861 70 aa13.38□□□□□ -0.27
BBS4-204ENST00000562084 HOXD3P31249 432 aaPredicted RBP13.38□□□□□ -0.27
BBS4-204ENST00000562084 UBE2E2Q96LR5 201 aa13.38□□□□□ -0.27
BBS4-204ENST00000562084 NACAE9PAV3 2078 aa13.37□□□□□ -0.27
BBS4-204ENST00000562084 J3KT08 172 aa13.37□□□□□ -0.27
BBS4-204ENST00000562084 LINC00694P0DN24 101 aa13.37□□□□□ -0.27
BBS4-204ENST00000562084 ACANP16112 2415 aa13.37□□□□□ -0.27
BBS4-204ENST00000562084 TRBV10-1A0A0K0K1A3 114 aa13.36□□□□□ -0.27
BBS4-204ENST00000562084 CRPP02741 224 aa13.36□□□□□ -0.27
BBS4-204ENST00000562084 RPS28P62857 69 aaKnown RBP13.36□□□□□ -0.27
BBS4-204ENST00000562084 GAGE2AQ6NT46 116 aa13.36□□□□□ -0.27
BBS4-204ENST00000562084 RBMY1BA6NDE4 496 aaKnown RBP13.36□□□□□ -0.27
BBS4-204ENST00000562084 RBMY1EA6NEQ0 496 aaKnown RBP13.36□□□□□ -0.27
BBS4-204ENST00000562084 F5H768 121 aa13.36□□□□□ -0.27
BBS4-204ENST00000562084 INSP01308 110 aa13.36□□□□□ -0.27
BBS4-204ENST00000562084 RBMY1DP0C7P1 496 aaKnown RBP13.36□□□□□ -0.27
BBS4-204ENST00000562084 C3orf56Q8N813 242 aa13.35□□□□□ -0.27
BBS4-204ENST00000562084 FAM218AQ96MZ4 157 aa13.35□□□□□ -0.27
BBS4-204ENST00000562084 MAST4O15021 2626 aa13.34□□□□□ -0.27
BBS4-204ENST00000562084 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.34□□□□□ -0.273e-8■■■□□ 18.2
BBS4-204ENST00000562084 H0YGX0 51 aa13.34□□□□□ -0.27
BBS4-204ENST00000562084 C2orf48Q96LS8 159 aa13.34□□□□□ -0.27
BBS4-204ENST00000562084 DNAL4O96015 105 aa13.33□□□□□ -0.27
BBS4-204ENST00000562084 A0A0U1RRA0 63 aa13.33□□□□□ -0.28
BBS4-204ENST00000562084 B4DSR2 109 aa13.33□□□□□ -0.28
BBS4-204ENST00000562084 RPL36AP83881 106 aaKnown RBP13.33□□□□□ -0.28
BBS4-204ENST00000562084 Q6JHZ5 121 aa13.33□□□□□ -0.28
BBS4-204ENST00000562084 C10orf99Q6UWK7 81 aa13.33□□□□□ -0.28
BBS4-204ENST00000562084 RPL36ALQ969Q0 106 aaKnown RBP13.33□□□□□ -0.28
BBS4-204ENST00000562084 HIVEP1P15822 2718 aa13.33□□□□□ -0.28
BBS4-204ENST00000562084 OBSCN-AS1Q96MR7 158 aa13.31□□□□□ -0.28
BBS4-204ENST00000562084 CDC42SE2Q9NRR3 84 aa13.31□□□□□ -0.28
BBS4-204ENST00000562084 CSPG4Q6UVK1 2322 aa13.31□□□□□ -0.28
BBS4-204ENST00000562084 IGHV4-59P01825 116 aa13.31□□□□□ -0.28
BBS4-204ENST00000562084 IGHV4-31P0DP07 118 aa13.31□□□□□ -0.28
BBS4-204ENST00000562084 RPL18AQ02543 176 aaKnown RBP13.31□□□□□ -0.28
BBS4-204ENST00000562084 TLN2Q9Y4G6 2542 aa13.3□□□□□ -0.28
BBS4-204ENST00000562084 TRAV13-1A0A0B4J241 112 aa13.29□□□□□ -0.28
BBS4-204ENST00000562084 LINC01356Q8N9X3 169 aa13.29□□□□□ -0.28
BBS4-204ENST00000562084 DEFB112Q30KQ8 113 aa13.29□□□□□ -0.28
BBS4-204ENST00000562084 K7EQD1 137 aa13.28□□□□□ -0.28
BBS4-204ENST00000562084 IL17DQ8TAD2 202 aa13.28□□□□□ -0.28
BBS4-204ENST00000562084 MAP6D1Q9H9H5 199 aa13.27□□□□□ -0.28
BBS4-204ENST00000562084 AVPP01185 164 aa13.27□□□□□ -0.29
BBS4-204ENST00000562084 KRTAP1-1Q07627 177 aa13.27□□□□□ -0.29
BBS4-204ENST00000562084 Q9HAA7 133 aa13.27□□□□□ -0.29
BBS4-204ENST00000562084 SND1-IT1Q9HBX3 110 aa13.27□□□□□ -0.29
BBS4-204ENST00000562084 KLK5Q9Y337 293 aaPredicted RBP13.27□□□□□ -0.29
BBS4-204ENST00000562084 PRM2P04554 102 aa13.26□□□□□ -0.29
BBS4-204ENST00000562084 TMEM258P61165 79 aa13.26□□□□□ -0.29
BBS4-204ENST00000562084 COX7B2Q8TF08 81 aa13.26□□□□□ -0.29
BBS4-204ENST00000562084 LINC00337Q8N6G1 96 aa13.25□□□□□ -0.29
BBS4-204ENST00000562084 SMR3AQ99954 134 aa13.25□□□□□ -0.29
BBS4-204ENST00000562084 J3QLI3 93 aa13.25□□□□□ -0.29
BBS4-204ENST00000562084 C5orf47Q569G3 176 aa13.25□□□□□ -0.29
BBS4-204ENST00000562084 SERP2Q8N6R1 65 aa13.25□□□□□ -0.29
BBS4-204ENST00000562084 F8P00451 2351 aa13.24□□□□□ -0.29
BBS4-204ENST00000562084 IGKV2-28A0A075B6P5 120 aa13.24□□□□□ -0.29
BBS4-204ENST00000562084 IGKV2D-28P01615 120 aa13.24□□□□□ -0.29
BBS4-204ENST00000562084 NTM-AS1Q6ZSK4 140 aa13.24□□□□□ -0.29
BBS4-204ENST00000562084 MIR7-3HGQ8N6C7 128 aa13.24□□□□□ -0.29
BBS4-204ENST00000562084 UBE2L6O14933 153 aa13.23□□□□□ -0.29
BBS4-204ENST00000562084 SMIM11BQ8TCY0 68 aa13.23□□□□□ -0.29
BBS4-204ENST00000562084 TMEM243Q9BU79 118 aa13.23□□□□□ -0.29
BBS4-204ENST00000562084 OR13C6PQ8NH95 151 aa13.23□□□□□ -0.29
BBS4-204ENST00000562084 IBA57-AS1B1ANH7 110 aa13.22□□□□□ -0.29
BBS4-204ENST00000562084 ZNF702PQ9H963 129 aa13.22□□□□□ -0.29
BBS4-204ENST00000562084 LY6G6DO95868 133 aa13.21□□□□□ -0.29
BBS4-204ENST00000562084 SLURP1P55000 103 aa13.21□□□□□ -0.29
BBS4-204ENST00000562084 S100A7L2Q5SY68 101 aa13.21□□□□□ -0.29
BBS4-204ENST00000562084 A0A087WYN8 130 aa13.21□□□□□ -0.3
BBS4-204ENST00000562084 TRGV1A0A0A0MS02 117 aa13.21□□□□□ -0.3
BBS4-204ENST00000562084 DYNLRB2Q8TF09 96 aa13.21□□□□□ -0.3
BBS4-204ENST00000562084 SVEP1Q4LDE5 3571 aa13.21□□□□□ -0.3
BBS4-204ENST00000562084 C14orf132Q9NPU4 83 aa13.2□□□□□ -0.3
BBS4-204ENST00000562084 SONP18583 2426 aaKnown RBP13.2□□□□□ -0.3
BBS4-204ENST00000562084 hADV29S1A0JD25 119 aa13.19□□□□□ -0.3
BBS4-204ENST00000562084 FAM19A5Q7Z5A7 132 aaPredicted RBP13.19□□□□□ -0.3
BBS4-204ENST00000562084 LOC107984640A0A0U1RRK4 108 aa13.19□□□□□ -0.3
BBS4-204ENST00000562084 ATP5EP2Q5VTU8 51 aa13.19□□□□□ -0.3
BBS4-204ENST00000562084 SMIM9A6NGZ8 99 aa13.18□□□□□ -0.3
BBS4-204ENST00000562084 LINC00158P58513 81 aa13.18□□□□□ -0.3
BBS4-204ENST00000562084 LINC00846Q9NV44 126 aa13.18□□□□□ -0.3
BBS4-204ENST00000562084 CCL18P55774 89 aa13.16□□□□□ -0.3
BBS4-204ENST00000562084 DEFB114Q30KQ6 69 aa13.16□□□□□ -0.3
BBS4-204ENST00000562084 C4orf3Q8WVX3 66 aa13.16□□□□□ -0.3
BBS4-204ENST00000562084 UPK3BQ9BT76 320 aa13.16□□□□□ -0.3
BBS4-204ENST00000562084 ANK3Q12955 4377 aaKnown RBP13.16□□□□□ -0.3
BBS4-204ENST00000562084 TRAV25A0A0B4J276 109 aa13.16□□□□□ -0.3
BBS4-204ENST00000562084 ORMDL1Q9P0S3 153 aa13.16□□□□□ -0.3
BBS4-204ENST00000562084 Q6YL49 198 aa13.15□□□□□ -0.3
BBS4-204ENST00000562084 C1orf158Q8N1D5 194 aa13.15□□□□□ -0.3
BBS4-204ENST00000562084 HIVEP2P31629 2446 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 111 ms