RNA–Protein interactions for RNA: ENST00000561781.1

RAB40C-206, Transcript of RAB40C, member RAS oncogene family, humanhuman

TSL 2

Gene RAB40C, Length 2,439 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40C-206ENST00000561781 KRTAP1-3Q8IUG1 177 aa13.55□□□□□ -0.24
RAB40C-206ENST00000561781 WFDC11Q8NEX6 87 aa13.55□□□□□ -0.24
RAB40C-206ENST00000561781 OBSCN-AS1Q96MR7 158 aa13.55□□□□□ -0.24
RAB40C-206ENST00000561781 Q9HAA7 133 aa13.55□□□□□ -0.24
RAB40C-206ENST00000561781 CSPG4Q6UVK1 2322 aa13.55□□□□□ -0.24
RAB40C-206ENST00000561781 IGHV4-30-2A0A087WSY4 118 aa13.54□□□□□ -0.24
RAB40C-206ENST00000561781 SOCS3O14543 225 aa13.54□□□□□ -0.24
RAB40C-206ENST00000561781 S100A7L2Q5SY68 101 aa13.54□□□□□ -0.24
RAB40C-206ENST00000561781 ATP5EP2Q5VTU8 51 aa13.53□□□□□ -0.24
RAB40C-206ENST00000561781 BPESC1Q9GZL8 116 aa13.53□□□□□ -0.24
RAB40C-206ENST00000561781 TRBV12-3P01733 135 aa13.53□□□□□ -0.24
RAB40C-206ENST00000561781 KLK9Q2XQG4 91 aa13.52□□□□□ -0.24
RAB40C-206ENST00000561781 HIST2H2BDQ6DRA6 164 aa13.52□□□□□ -0.24
RAB40C-206ENST00000561781 FAM104AQ969W3 186 aa13.52□□□□□ -0.24
RAB40C-206ENST00000561781 KLK9Q9UKQ9 250 aa13.52□□□□□ -0.24
RAB40C-206ENST00000561781 H7BZZ5 65 aa13.52□□□□□ -0.25
RAB40C-206ENST00000561781 HIVEP1P15822 2718 aa13.52□□□□□ -0.25
RAB40C-206ENST00000561781 FP248Q71RG6 208 aaPredicted RBP13.51□□□□□ -0.25
RAB40C-206ENST00000561781 RPL28P46779 137 aaKnown RBP13.5□□□□□ -0.25
RAB40C-206ENST00000561781 Q96MF0 132 aa13.5□□□□□ -0.25
RAB40C-206ENST00000561781 AVPP01185 164 aa13.5□□□□□ -0.25
RAB40C-206ENST00000561781 RNASE13Q5GAN3 156 aaKnown RBP13.5□□□□□ -0.25
RAB40C-206ENST00000561781 ABCA2Q9BZC7 2435 aa13.49□□□□□ -0.25
RAB40C-206ENST00000561781 CUBNO60494 3623 aa13.49□□□□□ -0.25
RAB40C-206ENST00000561781 IGKV3-7A0A075B6H7 116 aa13.49□□□□□ -0.25
RAB40C-206ENST00000561781 PF4P02776 101 aa13.49□□□□□ -0.25
RAB40C-206ENST00000561781 UNQ9165/PRO28630Q6UXU0 137 aa13.49□□□□□ -0.25
RAB40C-206ENST00000561781 TRAV23DV6A0A075B6W5 121 aa13.48□□□□□ -0.25
RAB40C-206ENST00000561781 KLLNB2CW77 178 aa13.48□□□□□ -0.25
RAB40C-206ENST00000561781 HILS1P60008 231 aa13.48□□□□□ -0.25
RAB40C-206ENST00000561781 BRK1Q8WUW1 75 aa13.48□□□□□ -0.25
RAB40C-206ENST00000561781 TEP1Q99973 2627 aaKnown RBP13.47□□□□□ -0.25
RAB40C-206ENST00000561781 IGHV4-61A0A0C4DH41 118 aa13.47□□□□□ -0.25
RAB40C-206ENST00000561781 SOSTDC1Q6X4U4 206 aa13.47□□□□□ -0.25
RAB40C-206ENST00000561781 BCE1O60756 84 aa13.47□□□□□ -0.25
RAB40C-206ENST00000561781 C9orf129Q5T035 196 aaKnown RBP13.47□□□□□ -0.25
RAB40C-206ENST00000561781 MINOS1Q5TGZ0 78 aa13.47□□□□□ -0.25
RAB40C-206ENST00000561781 HOXD3P31249 432 aaPredicted RBP13.46□□□□□ -0.25
RAB40C-206ENST00000561781 Q9H8V8 135 aa13.46□□□□□ -0.25
RAB40C-206ENST00000561781 SONP18583 2426 aaKnown RBP13.46□□□□□ -0.26
RAB40C-206ENST00000561781 TRAV13-2A0A0B4J235 113 aa13.45□□□□□ -0.26
RAB40C-206ENST00000561781 MTORP42345 2549 aa13.45□□□□□ -0.26
RAB40C-206ENST00000561781 TRBV10-3A0A0K0K1G6 114 aa13.44□□□□□ -0.26
RAB40C-206ENST00000561781 KLKP1Q107X0 134 aa13.44□□□□□ -0.26
RAB40C-206ENST00000561781 A0A0U1RQV1 116 aa13.43□□□□□ -0.26
RAB40C-206ENST00000561781 LYPD5Q6UWN5 251 aa13.43□□□□□ -0.26
RAB40C-206ENST00000561781 CDKN2A-AS1Q9UH64 79 aa13.43□□□□□ -0.26
RAB40C-206ENST00000561781 F8P00451 2351 aa13.43□□□□□ -0.26
RAB40C-206ENST00000561781 IGLV5-45A0A087WSX0 123 aa13.43□□□□□ -0.26
RAB40C-206ENST00000561781 MINOS1-NBL1R4GNA1 71 aa13.43□□□□□ -0.26
RAB40C-206ENST00000561781 TRAV7A0A075B6U4 112 aa13.42□□□□□ -0.26
RAB40C-206ENST00000561781 IGHV3-16A0A0C4DH30 117 aa13.42□□□□□ -0.26
RAB40C-206ENST00000561781 A0A0U1RRA0 63 aa13.42□□□□□ -0.26
RAB40C-206ENST00000561781 CCKP06307 115 aa13.42□□□□□ -0.26
RAB40C-206ENST00000561781 H0YGX0 51 aa13.41□□□□□ -0.26
RAB40C-206ENST00000561781 SMR3AQ99954 134 aa13.41□□□□□ -0.26
RAB40C-206ENST00000561781 A0A096LNT2 108 aa13.41□□□□□ -0.26
RAB40C-206ENST00000561781 CRPP02741 224 aa13.4□□□□□ -0.26
RAB40C-206ENST00000561781 ZNF625Q96I27 306 aaPredicted RBP13.4□□□□□ -0.26
RAB40C-206ENST00000561781 CR1P17927 2039 aa13.4□□□□□ -0.26
RAB40C-206ENST00000561781 A0A087WYN8 130 aa13.4□□□□□ -0.26
RAB40C-206ENST00000561781 IGLV5-39A0A0G2JS06 123 aa13.39□□□□□ -0.27
RAB40C-206ENST00000561781 NCR3O14931 201 aa13.39□□□□□ -0.27
RAB40C-206ENST00000561781 FAM19A1Q7Z5A9 133 aa13.38□□□□□ -0.27
RAB40C-206ENST00000561781 ZFP36P26651 326 aaKnown RBP13.38□□□□□ -0.27
RAB40C-206ENST00000561781 ATP5EP56381 51 aaPredicted RBP13.38□□□□□ -0.27
RAB40C-206ENST00000561781 ENHOQ6UWT2 76 aa13.38□□□□□ -0.27
RAB40C-206ENST00000561781 ANK3Q12955 4377 aaKnown RBP13.37□□□□□ -0.27
RAB40C-206ENST00000561781 NDUFA4O00483 81 aa13.37□□□□□ -0.27
RAB40C-206ENST00000561781 LMO4P61968 165 aa13.37□□□□□ -0.27
RAB40C-206ENST00000561781 WFDC9Q8NEX5 89 aa13.37□□□□□ -0.27
RAB40C-206ENST00000561781 TRBV7-6A0A0J9YX20 115 aa13.37□□□□□ -0.27
RAB40C-206ENST00000561781 RBM3P98179 157 aaKnown RBP13.35□□□□□ -0.27
RAB40C-206ENST00000561781 MXRA5Q9NR99 2828 aa13.35□□□□□ -0.27
RAB40C-206ENST00000561781 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP13.35□□□□□ -0.27
RAB40C-206ENST00000561781 NDUFC1O43677 76 aa13.34□□□□□ -0.27
RAB40C-206ENST00000561781 RHPN1-AS1Q9BWJ2 59 aa13.34□□□□□ -0.27
RAB40C-206ENST00000561781 LINC00474Q9P2X8 69 aa13.34□□□□□ -0.27
RAB40C-206ENST00000561781 CHCHD7Q9BUK0 85 aa13.33□□□□□ -0.27
RAB40C-206ENST00000561781 IGHV3-73A0A0B4J1V6 119 aa13.33□□□□□ -0.28
RAB40C-206ENST00000561781 F8WEM9 126 aa13.33□□□□□ -0.28
RAB40C-206ENST00000561781 DSCR9P59020 149 aa13.33□□□□□ -0.28
RAB40C-206ENST00000561781 PIK3CD-AS1Q5SR53 167 aa13.32□□□□□ -0.28
RAB40C-206ENST00000561781 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-206ENST00000561781 NIPBLQ6KC79 2804 aaeCLIP13.32□□□□□ -0.28
RAB40C-206ENST00000561781 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-206ENST00000561781 IGKV2-29A2NJV5 120 aaPredicted RBP13.32□□□□□ -0.28
RAB40C-206ENST00000561781 IGKV3-20P01619 116 aa13.32□□□□□ -0.28
RAB40C-206ENST00000561781 MIR7-3HGQ8N6C7 128 aa13.32□□□□□ -0.28
RAB40C-206ENST00000561781 C5orf56Q8N8D9 126 aa13.32□□□□□ -0.28
RAB40C-206ENST00000561781 SMIM11BQ8TCY0 68 aa13.32□□□□□ -0.28
RAB40C-206ENST00000561781 JMJD7-PLA2G4BH0Y9G9 81 aa13.31□□□□□ -0.28
RAB40C-206ENST00000561781 LECT2O14960 151 aa13.31□□□□□ -0.28
RAB40C-206ENST00000561781 PROK1P58294 105 aa13.31□□□□□ -0.28
RAB40C-206ENST00000561781 BLCAPP62952 87 aa13.31□□□□□ -0.28
RAB40C-206ENST00000561781 UBL5Q9BZL1 73 aa13.31□□□□□ -0.28
RAB40C-206ENST00000561781 ORMDL1Q9P0S3 153 aa13.31□□□□□ -0.28
RAB40C-206ENST00000561781 IGHV4-31P0DP07 118 aa13.31□□□□□ -0.28
RAB40C-206ENST00000561781 LINC00337Q8N6G1 96 aa13.31□□□□□ -0.28
RAB40C-206ENST00000561781 IGHV3-11P01762 117 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 35.7 ms