RNA–Protein interactions for RNA: ENST00000561668.5

PKD1-223, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 3

Gene PKD1, Length 665 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-223ENST00000561668 AMELXQ99217 191 aa12.06□□□□□ -0.48
PKD1-223ENST00000561668 GVQW2A0A096LPI5 108 aaPredicted RBP12.05□□□□□ -0.48
PKD1-223ENST00000561668 SDIM1Q6ZPB5 146 aa12.05□□□□□ -0.48
PKD1-223ENST00000561668 URB1-AS1Q96HZ7 61 aa12.05□□□□□ -0.48
PKD1-223ENST00000561668 TMEM141Q96I45 108 aa12.05□□□□□ -0.48
PKD1-223ENST00000561668 TIMM17AQ99595 171 aa12.05□□□□□ -0.48
PKD1-223ENST00000561668 TRAV13-1A0A0B4J241 112 aa12.04□□□□□ -0.48
PKD1-223ENST00000561668 SLPIP03973 132 aa12.04□□□□□ -0.48
PKD1-223ENST00000561668 HIGD2BQ4VC39 106 aa12.04□□□□□ -0.48
PKD1-223ENST00000561668 LINC00173Q6ZV60 143 aa12.04□□□□□ -0.48
PKD1-223ENST00000561668 IGHV3OR16-9A0A0B4J2B5 98 aa12.03□□□□□ -0.48
PKD1-223ENST00000561668 FAM19A3Q7Z5A8 133 aa12.03□□□□□ -0.48
PKD1-223ENST00000561668 IGHV1-58A0A0C4DH39 117 aa12.02□□□□□ -0.49
PKD1-223ENST00000561668 MALP21145 153 aa12.02□□□□□ -0.49
PKD1-223ENST00000561668 ERASQ7Z444 233 aa12.02□□□□□ -0.49
PKD1-223ENST00000561668 COLCA2A8K830 154 aa12.01□□□□□ -0.49
PKD1-223ENST00000561668 LINC00614P0C842 121 aa12.01□□□□□ -0.49
PKD1-223ENST00000561668 FA2HQ7L5A8 372 aa12.01□□□□□ -0.49
PKD1-223ENST00000561668 IFITM10A6NMD0 228 aa12□□□□□ -0.49
PKD1-223ENST00000561668 ZNF561-AS1K7EIQ3 104 aa12□□□□□ -0.49
PKD1-223ENST00000561668 UBE2D1P51668 147 aa12□□□□□ -0.49
PKD1-223ENST00000561668 TEX43Q6ZNM6 134 aa12□□□□□ -0.49
PKD1-223ENST00000561668 A0A096LNJ9 63 aa11.99□□□□□ -0.49
PKD1-223ENST00000561668 COX7A2LO14548 114 aa11.99□□□□□ -0.49
PKD1-223ENST00000561668 PAPPA-AS1Q5QFB9 102 aa11.99□□□□□ -0.49
PKD1-223ENST00000561668 LINC00242Q5T6M2 205 aa11.99□□□□□ -0.49
PKD1-223ENST00000561668 RAB5BP61020 215 aa11.98□□□□□ -0.49
PKD1-223ENST00000561668 Q6ZN92 141 aa11.98□□□□□ -0.49
PKD1-223ENST00000561668 VCX2Q9H322 139 aa11.98□□□□□ -0.49
PKD1-223ENST00000561668 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.98□□□□□ -0.49
PKD1-223ENST00000561668 LINC01561Q8N1V8 128 aa11.97□□□□□ -0.49
PKD1-223ENST00000561668 SCGB3A1Q96QR1 104 aa11.97□□□□□ -0.49
PKD1-223ENST00000561668 PKIGQ9Y2B9 76 aa11.97□□□□□ -0.49
PKD1-223ENST00000561668 SRRM2Q9UQ35 2752 aaKnown RBP11.97□□□□□ -0.49
PKD1-223ENST00000561668 FAT1Q14517 4588 aa11.96□□□□□ -0.49
PKD1-223ENST00000561668 APOMO95445 188 aa11.96□□□□□ -0.49
PKD1-223ENST00000561668 COX6A2Q02221 97 aa11.96□□□□□ -0.49
PKD1-223ENST00000561668 C5orf38Q86SI9 138 aa11.96□□□□□ -0.49
PKD1-223ENST00000561668 C2orf88Q9BSF0 95 aa11.96□□□□□ -0.49
PKD1-223ENST00000561668 A0A087WZ39 114 aa11.95□□□□□ -0.5
PKD1-223ENST00000561668 TRGC2P03986 189 aa11.95□□□□□ -0.5
PKD1-223ENST00000561668 ZC2HC1BQ5TFG8 222 aa11.95□□□□□ -0.5
PKD1-223ENST00000561668 CHCHD1Q96BP2 118 aaKnown RBP11.94□□□□□ -0.5
PKD1-223ENST00000561668 PANO1I0J062 215 aa11.93□□□□□ -0.5
PKD1-223ENST00000561668 SYCNQ0VAF6 134 aa11.93□□□□□ -0.5
PKD1-223ENST00000561668 CIRBPQ14011 172 aaKnown RBP11.93□□□□□ -0.5
PKD1-223ENST00000561668 PDZD11Q5EBL8 140 aa11.93□□□□□ -0.5
PKD1-223ENST00000561668 OR10D4PQ8NGN7 298 aa11.93□□□□□ -0.5
PKD1-223ENST00000561668 LINC00526Q96FQ7 95 aa11.93□□□□□ -0.5
PKD1-223ENST00000561668 C2orf48Q96LS8 159 aa11.93□□□□□ -0.5
PKD1-223ENST00000561668 CARD19Q96LW7 228 aa11.93□□□□□ -0.5
PKD1-223ENST00000561668 F8WDY8 70 aa11.92□□□□□ -0.5
PKD1-223ENST00000561668 HBDP02042 147 aa11.92□□□□□ -0.5
PKD1-223ENST00000561668 CHTF8P0CG12 524 aa11.92□□□□□ -0.5
PKD1-223ENST00000561668 SEC11AP67812 179 aa11.92□□□□□ -0.5
PKD1-223ENST00000561668 RPL37AP61513 92 aaKnown RBP11.91□□□□□ -0.5
PKD1-223ENST00000561668 MAJINQ3KP22 176 aa11.91□□□□□ -0.5
PKD1-223ENST00000561668 CST9LQ9H4G1 147 aa11.91□□□□□ -0.5
PKD1-223ENST00000561668 LINC00474Q9P2X8 69 aa11.91□□□□□ -0.5
PKD1-223ENST00000561668 IGLV4-69A0A075B6H9 119 aa11.9□□□□□ -0.5
PKD1-223ENST00000561668 A0A087WYN8 130 aa11.9□□□□□ -0.5
PKD1-223ENST00000561668 IGKV2-24A0A0C4DH68 120 aa11.9□□□□□ -0.5
PKD1-223ENST00000561668 SPACA4Q8TDM5 124 aa11.9□□□□□ -0.5
PKD1-223ENST00000561668 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.89□□□□□ -0.51
PKD1-223ENST00000561668 SCO1O75880 301 aa11.89□□□□□ -0.51
PKD1-223ENST00000561668 HERVK_113P63121 156 aa11.89□□□□□ -0.51
PKD1-223ENST00000561668 KIAA0087Q14695 138 aa11.89□□□□□ -0.51
PKD1-223ENST00000561668 PMVKQ15126 192 aa11.89□□□□□ -0.51
PKD1-223ENST00000561668 CAMK2N2Q96S95 79 aa11.89□□□□□ -0.51
PKD1-223ENST00000561668 IGLV5-45A0A087WSX0 123 aa11.88□□□□□ -0.51
PKD1-223ENST00000561668 TINCRA0A1B0GVN0 87 aa11.88□□□□□ -0.51
PKD1-223ENST00000561668 RNF151Q2KHN1 245 aa11.87□□□□□ -0.51
PKD1-223ENST00000561668 A0A0J9YXV3 536 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 J3QL48 77 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 ATP5LO75964 103 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 LINC00310P59036 64 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 SPAG11BQ08648 103 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 PMCHL1Q16048 86 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 STPG4Q8N801 248 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 C7orf33Q8WU49 177 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 ORAOV1Q8WV07 137 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 PLAC8Q9NZF1 115 aa11.86□□□□□ -0.51
PKD1-223ENST00000561668 Q6ZRU5 148 aa11.85□□□□□ -0.51
PKD1-223ENST00000561668 CDKN2A-AS1Q9UH64 79 aa11.85□□□□□ -0.51
PKD1-223ENST00000561668 A0A096LNI7 61 aa11.84□□□□□ -0.51
PKD1-223ENST00000561668 LOC107984640A0A0U1RRK4 108 aa11.84□□□□□ -0.51
PKD1-223ENST00000561668 BAGE3Q86Y29 109 aa11.84□□□□□ -0.51
PKD1-223ENST00000561668 MRPL35Q9NZE8 188 aaKnown RBP11.84□□□□□ -0.51
PKD1-223ENST00000561668 GEMIN7Q9H840 131 aaKnown RBP11.83□□□□□ -0.52
PKD1-223ENST00000561668 IGLC3P0DOY3 106 aa11.82□□□□□ -0.52
PKD1-223ENST00000561668 S100A1P23297 94 aa11.82□□□□□ -0.52
PKD1-223ENST00000561668 KRTAP10-4P60372 401 aaPredicted RBP11.82□□□□□ -0.52
PKD1-223ENST00000561668 GAGE2BQ13066 116 aa11.82□□□□□ -0.52
PKD1-223ENST00000561668 HSBP1O75506 76 aa11.81□□□□□ -0.52
PKD1-223ENST00000561668 FLG2Q5D862 2391 aaPredicted RBP11.81□□□□□ -0.52
PKD1-223ENST00000561668 SERF1AO75920 110 aa11.8□□□□□ -0.52
PKD1-223ENST00000561668 Q8IZM0 81 aa11.8□□□□□ -0.52
PKD1-223ENST00000561668 VPS13BQ7Z7G8 4022 aa11.8□□□□□ -0.52
PKD1-223ENST00000561668 TRAV12-1A0A0B4J245 112 aa11.79□□□□□ -0.52
PKD1-223ENST00000561668 NDUFA1O15239 70 aa11.79□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 95.8 ms