RNA–Protein interactions for RNA: ENST00000560986.1

HMG20A-212, Transcript of high mobility group 20A, humanhuman

TSL 2

Gene HMG20A, Length 747 nt, Biotype retained intron, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20A-212ENST00000560986 TRBV6-8A0A0A6YYG3 113 aa3.97□□□□□ -1.77
HMG20A-212ENST00000560986 MYMXA0A1B0GTQ4 84 aa3.97□□□□□ -1.77
HMG20A-212ENST00000560986 RPL39P62891 51 aaKnown RBP3.97□□□□□ -1.77
HMG20A-212ENST00000560986 MAJINQ3KP22 176 aa3.97□□□□□ -1.77
HMG20A-212ENST00000560986 KPRPQ5T749 579 aaPredicted RBP3.97□□□□□ -1.77
HMG20A-212ENST00000560986 LINC01561Q8N1V8 128 aa3.97□□□□□ -1.77
HMG20A-212ENST00000560986 SPATA3Q8NHX4 192 aa3.97□□□□□ -1.77
HMG20A-212ENST00000560986 SPANXB1Q9NS25 103 aaPredicted RBP3.97□□□□□ -1.77
HMG20A-212ENST00000560986 TEP1Q99973 2627 aaKnown RBP3.97□□□□□ -1.77
HMG20A-212ENST00000560986 SORL1Q92673 2214 aa3.97□□□□□ -1.77
HMG20A-212ENST00000560986 CUBNO60494 3623 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 UBE2L6O14933 153 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 LEPROTO15243 131 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 DAD1P61803 113 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 MRPL23Q16540 153 aaKnown RBP3.96□□□□□ -1.78
HMG20A-212ENST00000560986 FAM222AQ5U5X8 452 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 C2orf91Q6ZV80 131 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 NEGR1Q7Z3B1 354 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 OR5A1Q8NGJ0 315 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 COPS9Q8WXC6 57 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 CHAC1Q9BUX1 264 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 CDC42SE2Q9NRR3 84 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 TP73-AS1Q9UF72 201 aa3.96□□□□□ -1.78
HMG20A-212ENST00000560986 IGHV3-73A0A0B4J1V6 119 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 IGHV1-58A0A0C4DH39 117 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 A0A0J9YXY3 114 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 TMEM223A0PJW6 202 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 TIMM17BO60830 172 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 ZNF22P17026 224 aaPredicted RBP3.95□□□□□ -1.78
HMG20A-212ENST00000560986 UBE2D1P51668 147 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 DEFB135Q30KP9 77 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 BVES-AS1Q5T3Y7 98 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 TMEM170BQ5T4T1 132 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 AMMECR1LQ6DCA0 310 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 ATP6V0E2Q8NHE4 81 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 ORAOV1Q8WV07 137 aa3.95□□□□□ -1.78
HMG20A-212ENST00000560986 GEMIN7Q9H840 131 aaKnown RBP3.95□□□□□ -1.78
HMG20A-212ENST00000560986 ATRQ13535 2644 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 NIPBLQ6KC79 2804 aaeCLIP3.94□□□□□ -1.78
HMG20A-212ENST00000560986 TMEM238C9JI98 176 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 J3QQQ9 107 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 CDK2AP2O75956 126 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 PRM2P04554 102 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 DEFB130BP0DP73 79 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 DEFB130AP0DP74 79 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 LGALS3P17931 250 aaKnown RBP3.94□□□□□ -1.78
HMG20A-212ENST00000560986 HERV-K104P63124 156 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 MPV17L2Q567V2 206 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 LCE1EQ5T753 118 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 NTM-AS1Q6ZSK4 140 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 MUC7Q8TAX7 377 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 FAM104AQ969W3 186 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 ICOSQ9Y6W8 199 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 BAHCC1Q9P281 2608 aa3.94□□□□□ -1.78
HMG20A-212ENST00000560986 NACAE9PAV3 2078 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 IGKV2D-26A0A0A0MRZ7 120 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 TRAV8-6A0A0B4J262 113 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 A0A1B0GWB2 263 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 ZNF815PA8K554 130 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 IFITM1P13164 125 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 LELP1Q5T871 98 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 ZFAND6Q6FIF0 208 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 SCGB1D4Q6XE38 83 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 Q6ZUT4 128 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 PCP2Q8IVA1 136 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 CEND1Q8N111 149 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 LINC00469Q8N7U9 141 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 VSIG2Q96IQ7 327 aa3.93□□□□□ -1.78
HMG20A-212ENST00000560986 JMJD1CQ15652 2540 aa3.92□□□□□ -1.78
HMG20A-212ENST00000560986 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.92□□□□□ -1.78
HMG20A-212ENST00000560986 A0A0J9YXV3 536 aa3.92□□□□□ -1.78
HMG20A-212ENST00000560986 IGKV2-29A2NJV5 120 aaPredicted RBP3.92□□□□□ -1.78
HMG20A-212ENST00000560986 K7EP13 123 aa3.92□□□□□ -1.78
HMG20A-212ENST00000560986 IGHV3-30-3P0DP02 117 aa3.92□□□□□ -1.78
HMG20A-212ENST00000560986 EMP1P54849 157 aa3.92□□□□□ -1.78
HMG20A-212ENST00000560986 CIRBPQ14011 172 aaKnown RBP3.92□□□□□ -1.78
HMG20A-212ENST00000560986 LINC00242Q5T6M2 205 aa3.92□□□□□ -1.78
HMG20A-212ENST00000560986 TM2D3Q9BRN9 247 aa3.92□□□□□ -1.78
HMG20A-212ENST00000560986 TENM1Q9UKZ4 2725 aa3.92□□□□□ -1.78
HMG20A-212ENST00000560986 A0A087WZ39 114 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 TRAV16A0A0A6YYK6 109 aaPredicted RBP3.91□□□□□ -1.78
HMG20A-212ENST00000560986 IGHV3-38A0A0C4DH36 116 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 A0A0J9YY99 117 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 NDUFA1O15239 70 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 CXCL5P42830 114 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 HINT1P49773 126 aaPredicted RBP3.91□□□□□ -1.78
HMG20A-212ENST00000560986 SS18Q15532 418 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 KRTAP21-3Q3LHN1 58 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 LYRM7Q5U5X0 104 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 C15orf53Q8NAA6 179 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 HIST1H4GQ99525 98 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 CHCHD5Q9BSY4 110 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 SPANXDQ9BXN6 97 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 SPANXCQ9NY87 97 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 Q9UF83 564 aa3.91□□□□□ -1.78
HMG20A-212ENST00000560986 VWFP04275 2813 aa3.9□□□□□ -1.78
HMG20A-212ENST00000560986 TRAV8-4A0A0B4J246 113 aa3.9□□□□□ -1.79
HMG20A-212ENST00000560986 IGHV3OR16-9A0A0B4J2B5 98 aa3.9□□□□□ -1.79
HMG20A-212ENST00000560986 F5H768 121 aa3.9□□□□□ -1.79
HMG20A-212ENST00000560986 SMIM13P0DJ93 91 aa3.9□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 32.5 ms