RNA–Protein interactions for RNA: ENST00000560371.5

TRAF3-208, Transcript of TNF receptor associated factor 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF3, Length 7,640 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-208ENST00000560371 PCNTO95613 3336 aa9.94□□□□□ -0.82
TRAF3-208ENST00000560371 UPK3BQ9BT76 320 aa9.94□□□□□ -0.82
TRAF3-208ENST00000560371 NDUFA7O95182 113 aa9.94□□□□□ -0.82
TRAF3-208ENST00000560371 DCANP1Q8TF63 244 aa9.94□□□□□ -0.82
TRAF3-208ENST00000560371 NANOS2P60321 138 aaKnown RBP9.94□□□□□ -0.82
TRAF3-208ENST00000560371 COL27A1Q8IZC6 1860 aaPredicted RBP9.93□□□□□ -0.82
TRAF3-208ENST00000560371 BPY2O14599 106 aa9.93□□□□□ -0.82
TRAF3-208ENST00000560371 SCXQ7RTU7 201 aa9.93□□□□□ -0.82
TRAF3-208ENST00000560371 CLUHP3Q96NS8 147 aa9.93□□□□□ -0.82
TRAF3-208ENST00000560371 SERP1Q9Y6X1 66 aa9.93□□□□□ -0.82
TRAF3-208ENST00000560371 SPATA12Q7Z6I5 190 aa9.92□□□□□ -0.82
TRAF3-208ENST00000560371 SMIM20Q8N5G0 67 aa9.92□□□□□ -0.82
TRAF3-208ENST00000560371 A0A0U1RQV1 116 aa9.92□□□□□ -0.82
TRAF3-208ENST00000560371 TAX1BP3O14907 124 aa9.92□□□□□ -0.82
TRAF3-208ENST00000560371 PRM2P04554 102 aa9.92□□□□□ -0.82
TRAF3-208ENST00000560371 X6R8D5 127 aa9.92□□□□□ -0.82
TRAF3-208ENST00000560371 TRBV27A0A0K0K1C4 114 aa9.91□□□□□ -0.82
TRAF3-208ENST00000560371 CD164L2Q6UWJ8 174 aa9.91□□□□□ -0.82
TRAF3-208ENST00000560371 MAST4O15021 2626 aa9.91□□□□□ -0.82
TRAF3-208ENST00000560371 KLLNB2CW77 178 aa9.9□□□□□ -0.82
TRAF3-208ENST00000560371 RNASE3P12724 160 aaKnown RBP9.9□□□□□ -0.82
TRAF3-208ENST00000560371 PPDPFQ9H3Y8 114 aa9.9□□□□□ -0.82
TRAF3-208ENST00000560371 PIK3CD-AS1Q5SR53 167 aa9.9□□□□□ -0.82
TRAF3-208ENST00000560371 SPANXB1Q9NS25 103 aaPredicted RBP9.9□□□□□ -0.83
TRAF3-208ENST00000560371 LOC100131303A0A0U1RQF7 123 aa9.9□□□□□ -0.83
TRAF3-208ENST00000560371 ZNF22P17026 224 aaPredicted RBP9.89□□□□□ -0.83
TRAF3-208ENST00000560371 PRR4Q16378 134 aa9.89□□□□□ -0.83
TRAF3-208ENST00000560371 PCSK5Q92824 1860 aa9.89□□□□□ -0.83
TRAF3-208ENST00000560371 C9orf85Q96MD7 179 aa9.89□□□□□ -0.83
TRAF3-208ENST00000560371 TMEM223A0PJW6 202 aa9.89□□□□□ -0.83
TRAF3-208ENST00000560371 MRGPRG-AS1Q2M3A8 158 aa9.89□□□□□ -0.83
TRAF3-208ENST00000560371 IGKV2-28A0A075B6P5 120 aa9.88□□□□□ -0.83
TRAF3-208ENST00000560371 C10orf142B7Z368 130 aa9.88□□□□□ -0.83
TRAF3-208ENST00000560371 IGKV2D-28P01615 120 aa9.88□□□□□ -0.83
TRAF3-208ENST00000560371 IGLV4-69A0A075B6H9 119 aa9.88□□□□□ -0.83
TRAF3-208ENST00000560371 LINC00526Q96FQ7 95 aa9.88□□□□□ -0.83
TRAF3-208ENST00000560371 TRBV6-5A0A0K0K1A5 114 aa9.87□□□□□ -0.83
TRAF3-208ENST00000560371 NUPR2A6NF83 97 aa9.87□□□□□ -0.83
TRAF3-208ENST00000560371 MRPL55Q7Z7F7 128 aaKnown RBP9.87□□□□□ -0.83
TRAF3-208ENST00000560371 RNF185Q96GF1 192 aa9.87□□□□□ -0.83
TRAF3-208ENST00000560371 PYGO1Q9Y3Y4 419 aa9.87□□□□□ -0.83
TRAF3-208ENST00000560371 MGAM2Q2M2H8 2515 aa9.87□□□□□ -0.83
TRAF3-208ENST00000560371 LINC00308Q8TCZ7 52 aa9.87□□□□□ -0.83
TRAF3-208ENST00000560371 IGLV2-11P01706 119 aa9.86□□□□□ -0.83
TRAF3-208ENST00000560371 IGLV9-49A0A0B4J1Y8 123 aa9.86□□□□□ -0.83
TRAF3-208ENST00000560371 UBE2D2P62837 147 aa9.86□□□□□ -0.83
TRAF3-208ENST00000560371 J3KT08 172 aa9.86□□□□□ -0.83
TRAF3-208ENST00000560371 C6orf99Q4VX62 202 aa9.85□□□□□ -0.83
TRAF3-208ENST00000560371 ATRQ13535 2644 aa9.85□□□□□ -0.83
TRAF3-208ENST00000560371 TCL1BO95988 128 aa9.85□□□□□ -0.83
TRAF3-208ENST00000560371 PRR9Q5T870 116 aa9.85□□□□□ -0.83
TRAF3-208ENST00000560371 LINC00474Q9P2X8 69 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 FAM236DA0A1B0GTK5 79 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 FAM236CP0DP71 79 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 PRYO14603 147 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 LINC00959A0A1B0GUT2 108 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 TSHBP01222 138 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 C1orf158Q8N1D5 194 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 NRACQ8N912 160 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 LOC107984640A0A0U1RRK4 108 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 IGLV1-51P01701 117 aa9.84□□□□□ -0.83
TRAF3-208ENST00000560371 C5orf42Q9H799 3197 aa9.83□□□□□ -0.84
TRAF3-208ENST00000560371 A0A1W2PPR1 153 aa9.83□□□□□ -0.84
TRAF3-208ENST00000560371 Q6ZVQ6 151 aa9.83□□□□□ -0.84
TRAF3-208ENST00000560371 C3orf84H3BNL1 204 aa9.83□□□□□ -0.84
TRAF3-208ENST00000560371 ODF3L2Q3SX64 289 aa9.83□□□□□ -0.84
TRAF3-208ENST00000560371 U3KQK5 164 aa9.83□□□□□ -0.84
TRAF3-208ENST00000560371 ZNF706Q9Y5V0 76 aaPredicted RBP9.82□□□□□ -0.84
TRAF3-208ENST00000560371 PTH2Q96A98 100 aa9.82□□□□□ -0.84
TRAF3-208ENST00000560371 SLPIP03973 132 aa9.82□□□□□ -0.84
TRAF3-208ENST00000560371 A6NED7 52 aa9.81□□□□□ -0.84
TRAF3-208ENST00000560371 MRPS36P82909 103 aaKnown RBP9.8□□□□□ -0.84
TRAF3-208ENST00000560371 SDIM1Q6ZPB5 146 aa9.8□□□□□ -0.84
TRAF3-208ENST00000560371 M0R378 163 aa9.8□□□□□ -0.84
TRAF3-208ENST00000560371 C11orf21Q9P2W6 132 aa9.8□□□□□ -0.84
TRAF3-208ENST00000560371 SERP2Q8N6R1 65 aa9.8□□□□□ -0.84
TRAF3-208ENST00000560371 RPL37AP8A6NKH3 93 aa9.8□□□□□ -0.84
TRAF3-208ENST00000560371 BRI3O95415 125 aa9.8□□□□□ -0.84
TRAF3-208ENST00000560371 COX17Q14061 63 aa9.8□□□□□ -0.84
TRAF3-208ENST00000560371 RETNLBQ9BQ08 111 aa9.8□□□□□ -0.84
TRAF3-208ENST00000560371 CCKP06307 115 aa9.79□□□□□ -0.84
TRAF3-208ENST00000560371 LINC00643Q86TS7 51 aa9.79□□□□□ -0.84
TRAF3-208ENST00000560371 HECTD1Q9ULT8 2610 aa9.79□□□□□ -0.84
TRAF3-208ENST00000560371 A8MZ25 164 aa9.78□□□□□ -0.84
TRAF3-208ENST00000560371 EDN2P20800 178 aa9.78□□□□□ -0.84
TRAF3-208ENST00000560371 POLR2KP53803 58 aaKnown RBP9.78□□□□□ -0.84
TRAF3-208ENST00000560371 DHRS4-AS1Q9P1J3 65 aa9.78□□□□□ -0.84
TRAF3-208ENST00000560371 C16orf95Q9H693 158 aa9.78□□□□□ -0.84
TRAF3-208ENST00000560371 PLA2G1BP04054 148 aaKnown RBP9.78□□□□□ -0.84
TRAF3-208ENST00000560371 CENPEQ02224 2701 aa9.77□□□□□ -0.84
TRAF3-208ENST00000560371 WFDC13Q8IUB5 93 aa9.77□□□□□ -0.85
TRAF3-208ENST00000560371 C20orf197Q8N268 126 aa9.77□□□□□ -0.85
TRAF3-208ENST00000560371 TIMM17BO60830 172 aa9.77□□□□□ -0.85
TRAF3-208ENST00000560371 CDC42SE2Q9NRR3 84 aa9.77□□□□□ -0.85
TRAF3-208ENST00000560371 ENHOQ6UWT2 76 aa9.77□□□□□ -0.85
TRAF3-208ENST00000560371 MAPKAPK5-AS1Q8N8E1 139 aa9.77□□□□□ -0.85
TRAF3-208ENST00000560371 Q6ZTC4 211 aa9.76□□□□□ -0.85
TRAF3-208ENST00000560371 TRIAP1O43715 76 aa9.76□□□□□ -0.85
TRAF3-208ENST00000560371 CYSRT1A8MQ03 144 aa9.75□□□□□ -0.85
TRAF3-208ENST00000560371 PLAC8L1A1L4L8 177 aa9.75□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms