RNA–Protein interactions for RNA: ENST00000560208.1

CRNDE-209, Transcript of colorectal neoplasia differentially expressed, humanhuman

TSL 2

Gene CRNDE, Length 735 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNDE-209ENST00000560208 C18orf32Q8TCD1 76 aa14.96□□□□□ -0.01
CRNDE-209ENST00000560208 TMEM141Q96I45 108 aa14.96□□□□□ -0.01
CRNDE-209ENST00000560208 G0S2P27469 103 aa14.95□□□□□ -0.02
CRNDE-209ENST00000560208 J3QL48 77 aa14.94□□□□□ -0.02
CRNDE-209ENST00000560208 ZC2HC1BQ5TFG8 222 aa14.94□□□□□ -0.02
CRNDE-209ENST00000560208 Q6ZN92 141 aa14.94□□□□□ -0.02
CRNDE-209ENST00000560208 TOMM6Q96B49 74 aa14.94□□□□□ -0.02
CRNDE-209ENST00000560208 LINC01546A6NGU7 62 aa14.93□□□□□ -0.02
CRNDE-209ENST00000560208 SCO1O75880 301 aa14.93□□□□□ -0.02
CRNDE-209ENST00000560208 KRTAP10-4P60372 401 aaPredicted RBP14.93□□□□□ -0.02
CRNDE-209ENST00000560208 TEX43Q6ZNM6 134 aa14.93□□□□□ -0.02
CRNDE-209ENST00000560208 AP5S1Q9NUS5 200 aa14.93□□□□□ -0.02
CRNDE-209ENST00000560208 IGIPA6NJ69 53 aa14.92□□□□□ -0.02
CRNDE-209ENST00000560208 MALP21145 153 aa14.92□□□□□ -0.02
CRNDE-209ENST00000560208 CNBPP62633 177 aaKnown RBP14.92□□□□□ -0.02
CRNDE-209ENST00000560208 SDIM1Q6ZPB5 146 aa14.92□□□□□ -0.02
CRNDE-209ENST00000560208 C5orf38Q86SI9 138 aa14.92□□□□□ -0.02
CRNDE-209ENST00000560208 SCGB3A1Q96QR1 104 aa14.92□□□□□ -0.02
CRNDE-209ENST00000560208 COX7A2LO14548 114 aa14.91□□□□□ -0.02
CRNDE-209ENST00000560208 C2orf88Q9BSF0 95 aa14.91□□□□□ -0.02
CRNDE-209ENST00000560208 VCX2Q9H322 139 aa14.91□□□□□ -0.02
CRNDE-209ENST00000560208 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP14.91□□□□□ -0.02
CRNDE-209ENST00000560208 IGHV1-58A0A0C4DH39 117 aa14.9□□□□□ -0.02
CRNDE-209ENST00000560208 URB1-AS1Q96HZ7 61 aa14.9□□□□□ -0.02
CRNDE-209ENST00000560208 KRTAP29-1A8MX34 341 aaPredicted RBP14.89□□□□□ -0.03
CRNDE-209ENST00000560208 TRGC2P03986 189 aa14.89□□□□□ -0.03
CRNDE-209ENST00000560208 LINC00614P0C842 121 aa14.89□□□□□ -0.03
CRNDE-209ENST00000560208 TIMM17AQ99595 171 aa14.89□□□□□ -0.03
CRNDE-209ENST00000560208 PANO1I0J062 215 aa14.88□□□□□ -0.03
CRNDE-209ENST00000560208 LINC00173Q6ZV60 143 aa14.88□□□□□ -0.03
CRNDE-209ENST00000560208 GVQW2A0A096LPI5 108 aaPredicted RBP14.87□□□□□ -0.03
CRNDE-209ENST00000560208 COLCA2A8K830 154 aa14.87□□□□□ -0.03
CRNDE-209ENST00000560208 SLPIP03973 132 aa14.87□□□□□ -0.03
CRNDE-209ENST00000560208 RAB5BP61020 215 aa14.87□□□□□ -0.03
CRNDE-209ENST00000560208 PMCHL1Q16048 86 aa14.87□□□□□ -0.03
CRNDE-209ENST00000560208 ERASQ7Z444 233 aa14.87□□□□□ -0.03
CRNDE-209ENST00000560208 LINC00526Q96FQ7 95 aa14.87□□□□□ -0.03
CRNDE-209ENST00000560208 AMELXQ99217 191 aa14.87□□□□□ -0.03
CRNDE-209ENST00000560208 TRAV16A0A0A6YYK6 109 aaPredicted RBP14.86□□□□□ -0.03
CRNDE-209ENST00000560208 NPSP0C0P6 89 aa14.86□□□□□ -0.03
CRNDE-209ENST00000560208 PAPPA-AS1Q5QFB9 102 aa14.86□□□□□ -0.03
CRNDE-209ENST00000560208 IGHV3-64A0A075B6Q5 118 aa14.85□□□□□ -0.03
CRNDE-209ENST00000560208 UBE2D1P51668 147 aa14.85□□□□□ -0.03
CRNDE-209ENST00000560208 RPL37AP61513 92 aaKnown RBP14.85□□□□□ -0.03
CRNDE-209ENST00000560208 LINC00242Q5T6M2 205 aa14.85□□□□□ -0.03
CRNDE-209ENST00000560208 PKHD1L1Q86WI1 4243 aa14.84□□□□□ -0.03
CRNDE-209ENST00000560208 LRP1Q07954 4544 aaKnown RBP14.84□□□□□ -0.03
CRNDE-209ENST00000560208 LINC01549A6NIU2 74 aa14.84□□□□□ -0.03
CRNDE-209ENST00000560208 ZNF561-AS1K7EIQ3 104 aa14.83□□□□□ -0.04
CRNDE-209ENST00000560208 COX6A2Q02221 97 aa14.83□□□□□ -0.04
CRNDE-209ENST00000560208 A0A096LNJ9 63 aa14.82□□□□□ -0.04
CRNDE-209ENST00000560208 IGHV3OR16-9A0A0B4J2B5 98 aa14.82□□□□□ -0.04
CRNDE-209ENST00000560208 APOMO95445 188 aa14.82□□□□□ -0.04
CRNDE-209ENST00000560208 HBDP02042 147 aa14.82□□□□□ -0.04
CRNDE-209ENST00000560208 CIRBPQ14011 172 aaKnown RBP14.82□□□□□ -0.04
CRNDE-209ENST00000560208 BAGE3Q86Y29 109 aa14.81□□□□□ -0.04
CRNDE-209ENST00000560208 DPH3Q96FX2 82 aa14.81□□□□□ -0.04
CRNDE-209ENST00000560208 FAT3Q8TDW7 4589 aa14.8□□□□□ -0.04
CRNDE-209ENST00000560208 IGLV4-69A0A075B6H9 119 aa14.79□□□□□ -0.04
CRNDE-209ENST00000560208 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP14.79□□□□□ -0.04
CRNDE-209ENST00000560208 SPAG11BQ08648 103 aa14.79□□□□□ -0.04
CRNDE-209ENST00000560208 ORAOV1Q8WV07 137 aa14.79□□□□□ -0.04
CRNDE-209ENST00000560208 CHTF8P0CG12 524 aa14.78□□□□□ -0.04
CRNDE-209ENST00000560208 CHCHD1Q96BP2 118 aaKnown RBP14.78□□□□□ -0.04
CRNDE-209ENST00000560208 A0A0J9YXV3 536 aa14.77□□□□□ -0.05
CRNDE-209ENST00000560208 NDUFA6P56556 154 aa14.77□□□□□ -0.05
CRNDE-209ENST00000560208 CARD19Q96LW7 228 aa14.77□□□□□ -0.05
CRNDE-209ENST00000560208 A0A087WYN8 130 aa14.76□□□□□ -0.05
CRNDE-209ENST00000560208 A0A087WZ39 114 aa14.76□□□□□ -0.05
CRNDE-209ENST00000560208 OXTP01178 125 aa14.76□□□□□ -0.05
CRNDE-209ENST00000560208 GEMIN7Q9H840 131 aaKnown RBP14.76□□□□□ -0.05
CRNDE-209ENST00000560208 SYCNQ0VAF6 134 aa14.75□□□□□ -0.05
CRNDE-209ENST00000560208 PMVKQ15126 192 aa14.75□□□□□ -0.05
CRNDE-209ENST00000560208 PDZD11Q5EBL8 140 aa14.75□□□□□ -0.05
CRNDE-209ENST00000560208 SPACA4Q8TDM5 124 aa14.75□□□□□ -0.05
CRNDE-209ENST00000560208 CAMK2N2Q96S95 79 aa14.75□□□□□ -0.05
CRNDE-209ENST00000560208 CST9LQ9H4G1 147 aa14.75□□□□□ -0.05
CRNDE-209ENST00000560208 HSBP1O75506 76 aa14.74□□□□□ -0.05
CRNDE-209ENST00000560208 HNRNPA3P51991 378 aaKnown RBP14.74□□□□□ -0.05
CRNDE-209ENST00000560208 HERVK_113P63121 156 aa14.74□□□□□ -0.05
CRNDE-209ENST00000560208 SEC11AP67812 179 aa14.74□□□□□ -0.05
CRNDE-209ENST00000560208 FAM19A3Q7Z5A8 133 aa14.74□□□□□ -0.05
CRNDE-209ENST00000560208 OR10D4PQ8NGN7 298 aa14.74□□□□□ -0.05
CRNDE-209ENST00000560208 ATP5LO75964 103 aa14.72□□□□□ -0.05
CRNDE-209ENST00000560208 Q6ZRU5 148 aa14.72□□□□□ -0.05
CRNDE-209ENST00000560208 FAM19A2Q8N3H0 131 aa14.72□□□□□ -0.05
CRNDE-209ENST00000560208 ATP6V1G1O75348 118 aa14.71□□□□□ -0.05
CRNDE-209ENST00000560208 SERF1AO75920 110 aa14.71□□□□□ -0.05
CRNDE-209ENST00000560208 LINC00469Q8N7U9 141 aa14.71□□□□□ -0.05
CRNDE-209ENST00000560208 C2orf48Q96LS8 159 aa14.71□□□□□ -0.05
CRNDE-209ENST00000560208 CDKN2A-AS1Q9UH64 79 aa14.71□□□□□ -0.05
CRNDE-209ENST00000560208 PACRGQ96M98 296 aaPredicted RBP14.7□□□□□ -0.06
CRNDE-209ENST00000560208 PLAC8Q9NZF1 115 aa14.7□□□□□ -0.06
CRNDE-209ENST00000560208 TINCRA0A1B0GVN0 87 aa14.69□□□□□ -0.06
CRNDE-209ENST00000560208 S100A1P23297 94 aa14.69□□□□□ -0.06
CRNDE-209ENST00000560208 TOMM7Q9P0U1 55 aa14.69□□□□□ -0.06
CRNDE-209ENST00000560208 LINC01561Q8N1V8 128 aa14.68□□□□□ -0.06
CRNDE-209ENST00000560208 IGKV2-24A0A0C4DH68 120 aa14.67□□□□□ -0.06
CRNDE-209ENST00000560208 LINC00310P59036 64 aa14.67□□□□□ -0.06
CRNDE-209ENST00000560208 MAJINQ3KP22 176 aa14.67□□□□□ -0.06
Retrieved 100 of 20,778 RNA–protein pairs in 70.2 ms