RNA–Protein interactions for RNA: ENST00000560055.5

RPL28-209, Transcript of ribosomal protein L28, humanhuman

TSL 3 BASIC

Gene RPL28, Length 670 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL28-209ENST00000560055 A0A096LNJ9 63 aa10.89□□□□□ -0.67
RPL28-209ENST00000560055 IGHV3OR16-9A0A0B4J2B5 98 aa10.89□□□□□ -0.67
RPL28-209ENST00000560055 UBE2D1P51668 147 aa10.89□□□□□ -0.67
RPL28-209ENST00000560055 XGP55808 180 aa10.89□□□□□ -0.67
RPL28-209ENST00000560055 HIGD2BQ4VC39 106 aa10.89□□□□□ -0.67
RPL28-209ENST00000560055 C9orf163Q8N9P6 203 aa10.89□□□□□ -0.67
RPL28-209ENST00000560055 FAM30AQ9NZY2 134 aa10.89□□□□□ -0.67
RPL28-209ENST00000560055 TRGC2P03986 189 aa10.88□□□□□ -0.67
RPL28-209ENST00000560055 LINC00242Q5T6M2 205 aa10.88□□□□□ -0.67
RPL28-209ENST00000560055 C2orf88Q9BSF0 95 aa10.88□□□□□ -0.67
RPL28-209ENST00000560055 VCX2Q9H322 139 aa10.88□□□□□ -0.67
RPL28-209ENST00000560055 SCO1O75880 301 aa10.87□□□□□ -0.67
RPL28-209ENST00000560055 RAB5BP61020 215 aa10.87□□□□□ -0.67
RPL28-209ENST00000560055 PAPPA-AS1Q5QFB9 102 aa10.87□□□□□ -0.67
RPL28-209ENST00000560055 C5orf38Q86SI9 138 aa10.87□□□□□ -0.67
RPL28-209ENST00000560055 SCGB3A1Q96QR1 104 aa10.87□□□□□ -0.67
RPL28-209ENST00000560055 MALP21145 153 aa10.86□□□□□ -0.67
RPL28-209ENST00000560055 FAM19A3Q7Z5A8 133 aa10.86□□□□□ -0.67
RPL28-209ENST00000560055 VPS13BQ7Z7G8 4022 aa10.85□□□□□ -0.67
RPL28-209ENST00000560055 COX6A2Q02221 97 aa10.85□□□□□ -0.67
RPL28-209ENST00000560055 A0A087WZ39 114 aa10.84□□□□□ -0.67
RPL28-209ENST00000560055 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.84□□□□□ -0.67
RPL28-209ENST00000560055 SDIM1Q6ZPB5 146 aa10.84□□□□□ -0.67
RPL28-209ENST00000560055 HBDP02042 147 aa10.83□□□□□ -0.68
RPL28-209ENST00000560055 CHCHD1Q96BP2 118 aaKnown RBP10.83□□□□□ -0.68
RPL28-209ENST00000560055 LINC00526Q96FQ7 95 aa10.83□□□□□ -0.68
RPL28-209ENST00000560055 IGHV3-64A0A075B6Q5 118 aa10.82□□□□□ -0.68
RPL28-209ENST00000560055 APOMO95445 188 aa10.82□□□□□ -0.68
RPL28-209ENST00000560055 PMCHL1Q16048 86 aa10.82□□□□□ -0.68
RPL28-209ENST00000560055 PDZD11Q5EBL8 140 aa10.82□□□□□ -0.68
RPL28-209ENST00000560055 IGLV4-69A0A075B6H9 119 aa10.81□□□□□ -0.68
RPL28-209ENST00000560055 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.81□□□□□ -0.68
RPL28-209ENST00000560055 ZNF561-AS1K7EIQ3 104 aa10.81□□□□□ -0.68
RPL28-209ENST00000560055 HAMPP81172 84 aa10.81□□□□□ -0.68
RPL28-209ENST00000560055 Q8N1X5 172 aa10.81□□□□□ -0.68
RPL28-209ENST00000560055 OR10D4PQ8NGN7 298 aa10.81□□□□□ -0.68
RPL28-209ENST00000560055 CST9LQ9H4G1 147 aa10.81□□□□□ -0.68
RPL28-209ENST00000560055 LINC01561Q8N1V8 128 aa10.8□□□□□ -0.68
RPL28-209ENST00000560055 HERVK_113P63121 156 aa10.79□□□□□ -0.68
RPL28-209ENST00000560055 SEC11AP67812 179 aa10.79□□□□□ -0.68
RPL28-209ENST00000560055 SPAG11BQ08648 103 aa10.79□□□□□ -0.68
RPL28-209ENST00000560055 PMVKQ15126 192 aa10.79□□□□□ -0.68
RPL28-209ENST00000560055 ORAOV1Q8WV07 137 aa10.79□□□□□ -0.68
RPL28-209ENST00000560055 C2orf48Q96LS8 159 aa10.79□□□□□ -0.68
RPL28-209ENST00000560055 CARD19Q96LW7 228 aa10.79□□□□□ -0.68
RPL28-209ENST00000560055 CHAC1Q9BUX1 264 aa10.79□□□□□ -0.68
RPL28-209ENST00000560055 A0A0J9YXV3 536 aa10.78□□□□□ -0.68
RPL28-209ENST00000560055 LINC00310P59036 64 aa10.78□□□□□ -0.68
RPL28-209ENST00000560055 SYCNQ0VAF6 134 aa10.78□□□□□ -0.68
RPL28-209ENST00000560055 SCXQ7RTU7 201 aa10.78□□□□□ -0.68
RPL28-209ENST00000560055 BAGE3Q86Y29 109 aa10.78□□□□□ -0.68
RPL28-209ENST00000560055 TINCRA0A1B0GVN0 87 aa10.77□□□□□ -0.69
RPL28-209ENST00000560055 PANO1I0J062 215 aa10.77□□□□□ -0.69
RPL28-209ENST00000560055 CIRBPQ14011 172 aaKnown RBP10.77□□□□□ -0.69
RPL28-209ENST00000560055 CDKN2A-AS1Q9UH64 79 aa10.77□□□□□ -0.69
RPL28-209ENST00000560055 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP10.77□□□□□ -0.69
RPL28-209ENST00000560055 IGLV5-45A0A087WSX0 123 aa10.76□□□□□ -0.69
RPL28-209ENST00000560055 ATP5LO75964 103 aa10.76□□□□□ -0.69
RPL28-209ENST00000560055 KIAA0087Q14695 138 aa10.76□□□□□ -0.69
RPL28-209ENST00000560055 Q6ZRU5 148 aa10.76□□□□□ -0.69
RPL28-209ENST00000560055 GEMIN7Q9H840 131 aaKnown RBP10.76□□□□□ -0.69
RPL28-209ENST00000560055 F8WDY8 70 aa10.75□□□□□ -0.69
RPL28-209ENST00000560055 HSBP1O75506 76 aa10.75□□□□□ -0.69
RPL28-209ENST00000560055 SERF1AO75920 110 aa10.75□□□□□ -0.69
RPL28-209ENST00000560055 CIRBP-AS1Q8TBR5 109 aa10.75□□□□□ -0.69
RPL28-209ENST00000560055 CAMK2N2Q96S95 79 aa10.75□□□□□ -0.69
RPL28-209ENST00000560055 ATP6V1G1O75348 118 aa10.74□□□□□ -0.69
RPL28-209ENST00000560055 S100A1P23297 94 aa10.74□□□□□ -0.69
RPL28-209ENST00000560055 IGLC3P0DOY3 106 aa10.73□□□□□ -0.69
RPL28-209ENST00000560055 FAM19A2Q8N3H0 131 aa10.73□□□□□ -0.69
RPL28-209ENST00000560055 LINC00469Q8N7U9 141 aa10.73□□□□□ -0.69
RPL28-209ENST00000560055 SPACA4Q8TDM5 124 aa10.73□□□□□ -0.69
RPL28-209ENST00000560055 NUPR1O60356 82 aa10.72□□□□□ -0.69
RPL28-209ENST00000560055 SMR3BP02814 79 aaPredicted RBP10.72□□□□□ -0.69
RPL28-209ENST00000560055 CHTF8P0CG12 524 aa10.72□□□□□ -0.69
RPL28-209ENST00000560055 MRPL35Q9NZE8 188 aaKnown RBP10.72□□□□□ -0.69
RPL28-209ENST00000560055 NDUFA1O15239 70 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST1H2BKO60814 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST1H2BJP06899 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST1H2BOP23527 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST1H2BBP33778 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 NDUFA6P56556 154 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST1H2BDP58876 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST1H2BCP62807 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST2H2BEQ16778 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 RNF151Q2KHN1 245 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST2H2BFQ5QNW6 126 aaPredicted RBP10.71□□□□□ -0.69
RPL28-209ENST00000560055 C10orf25Q5T742 122 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST1H2BHQ93079 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 IFI27L1Q96BM0 104 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST1H2BNQ99877 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 HIST1H2BMQ99879 126 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 PKIGQ9Y2B9 76 aa10.71□□□□□ -0.69
RPL28-209ENST00000560055 A0A096LNI7 61 aa10.7□□□□□ -0.7
RPL28-209ENST00000560055 SMIM1B2RUZ4 78 aa10.7□□□□□ -0.7
RPL28-209ENST00000560055 UNQ6190/PRO20217Q6UXQ8 127 aa10.7□□□□□ -0.7
RPL28-209ENST00000560055 Q8IZM0 81 aa10.7□□□□□ -0.7
RPL28-209ENST00000560055 PACRGQ96M98 296 aaPredicted RBP10.7□□□□□ -0.7
RPL28-209ENST00000560055 C6orf48Q9UBA6 75 aa10.69□□□□□ -0.7
RPL28-209ENST00000560055 TRAV12-1A0A0B4J245 112 aa10.68□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 60 ms