RNA–Protein interactions for RNA: ENST00000559222.5

CASC4-209, Transcript of cancer susceptibility 4, humanhuman

TSL 3

Gene CASC4, Length 742 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CASC4-209ENST00000559222 SMCO4Q9NRQ5 59 aa12.02□□□□□ -0.49
CASC4-209ENST00000559222 AP5S1Q9NUS5 200 aa12.02□□□□□ -0.49
CASC4-209ENST00000559222 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP12.02□□□□□ -0.49
CASC4-209ENST00000559222 SDIM1Q6ZPB5 146 aa12.01□□□□□ -0.49
CASC4-209ENST00000559222 AMELXQ99217 191 aa12.01□□□□□ -0.49
CASC4-209ENST00000559222 IGHV3OR16-9A0A0B4J2B5 98 aa12□□□□□ -0.49
CASC4-209ENST00000559222 UBE2D1P51668 147 aa12□□□□□ -0.49
CASC4-209ENST00000559222 LINC00242Q5T6M2 205 aa12□□□□□ -0.49
CASC4-209ENST00000559222 TEX43Q6ZNM6 134 aa12□□□□□ -0.49
CASC4-209ENST00000559222 FA2HQ7L5A8 372 aa12□□□□□ -0.49
CASC4-209ENST00000559222 A0A096LNJ9 63 aa11.99□□□□□ -0.49
CASC4-209ENST00000559222 CHTF8P0CG12 524 aa11.99□□□□□ -0.49
CASC4-209ENST00000559222 MALP21145 153 aa11.99□□□□□ -0.49
CASC4-209ENST00000559222 PMCHL1Q16048 86 aa11.98□□□□□ -0.49
CASC4-209ENST00000559222 TIMM17AQ99595 171 aa11.98□□□□□ -0.49
CASC4-209ENST00000559222 IGLV4-69A0A075B6H9 119 aa11.97□□□□□ -0.49
CASC4-209ENST00000559222 SCO1O75880 301 aa11.97□□□□□ -0.49
CASC4-209ENST00000559222 CIRBP-AS1Q8TBR5 109 aa11.97□□□□□ -0.49
CASC4-209ENST00000559222 SCGB3A1Q96QR1 104 aa11.97□□□□□ -0.49
CASC4-209ENST00000559222 CHAC1Q9BUX1 264 aa11.97□□□□□ -0.49
CASC4-209ENST00000559222 VPS13BQ7Z7G8 4022 aa11.96□□□□□ -0.49
CASC4-209ENST00000559222 IGHV3-64A0A075B6Q5 118 aa11.96□□□□□ -0.49
CASC4-209ENST00000559222 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.96□□□□□ -0.49
CASC4-209ENST00000559222 Q5VSD8 79 aa11.96□□□□□ -0.49
CASC4-209ENST00000559222 Q6ZN92 141 aa11.96□□□□□ -0.49
CASC4-209ENST00000559222 VCX2Q9H322 139 aa11.96□□□□□ -0.49
CASC4-209ENST00000559222 ERASQ7Z444 233 aa11.95□□□□□ -0.5
CASC4-209ENST00000559222 C2orf88Q9BSF0 95 aa11.95□□□□□ -0.5
CASC4-209ENST00000559222 ZNF561-AS1K7EIQ3 104 aa11.94□□□□□ -0.5
CASC4-209ENST00000559222 NPSP0C0P6 89 aa11.94□□□□□ -0.5
CASC4-209ENST00000559222 SPAG11BQ08648 103 aa11.94□□□□□ -0.5
CASC4-209ENST00000559222 Q6ZRU5 148 aa11.94□□□□□ -0.5
CASC4-209ENST00000559222 ORAOV1Q8WV07 137 aa11.94□□□□□ -0.5
CASC4-209ENST00000559222 CARD19Q96LW7 228 aa11.94□□□□□ -0.5
CASC4-209ENST00000559222 EPM2AB3EWF7 344 aa11.93□□□□□ -0.5
CASC4-209ENST00000559222 LINC00614P0C842 121 aa11.93□□□□□ -0.5
CASC4-209ENST00000559222 SYCNQ0VAF6 134 aa11.93□□□□□ -0.5
CASC4-209ENST00000559222 A0A087WZ39 114 aa11.92□□□□□ -0.5
CASC4-209ENST00000559222 A0A0J9YXV3 536 aa11.92□□□□□ -0.5
CASC4-209ENST00000559222 COLCA2A8K830 154 aa11.92□□□□□ -0.5
CASC4-209ENST00000559222 TRGC2P03986 189 aa11.92□□□□□ -0.5
CASC4-209ENST00000559222 G0S2P27469 103 aa11.92□□□□□ -0.5
CASC4-209ENST00000559222 CIRBPQ14011 172 aaKnown RBP11.92□□□□□ -0.5
CASC4-209ENST00000559222 A0A096LNI7 61 aa11.91□□□□□ -0.5
CASC4-209ENST00000559222 FAM19A3Q7Z5A8 133 aa11.91□□□□□ -0.5
CASC4-209ENST00000559222 LINC00528Q8N1L1 170 aa11.91□□□□□ -0.5
CASC4-209ENST00000559222 APOMO95445 188 aa11.9□□□□□ -0.5
CASC4-209ENST00000559222 HERC1Q15751 4861 aa11.9□□□□□ -0.5
CASC4-209ENST00000559222 OR10D4PQ8NGN7 298 aa11.9□□□□□ -0.5
CASC4-209ENST00000559222 SPACA4Q8TDM5 124 aa11.9□□□□□ -0.5
CASC4-209ENST00000559222 CAMK2N2Q96S95 79 aa11.9□□□□□ -0.5
CASC4-209ENST00000559222 IGKV2-24A0A0C4DH68 120 aa11.89□□□□□ -0.51
CASC4-209ENST00000559222 KIAA0087Q14695 138 aa11.89□□□□□ -0.51
CASC4-209ENST00000559222 PDZD11Q5EBL8 140 aa11.89□□□□□ -0.51
CASC4-209ENST00000559222 C10orf25Q5T742 122 aa11.89□□□□□ -0.51
CASC4-209ENST00000559222 HBDP02042 147 aa11.88□□□□□ -0.51
CASC4-209ENST00000559222 PAPPA-AS1Q5QFB9 102 aa11.88□□□□□ -0.51
CASC4-209ENST00000559222 C2orf48Q96LS8 159 aa11.88□□□□□ -0.51
CASC4-209ENST00000559222 CST9LQ9H4G1 147 aa11.88□□□□□ -0.51
CASC4-209ENST00000559222 CDKN2A-AS1Q9UH64 79 aa11.88□□□□□ -0.51
CASC4-209ENST00000559222 LINC00310P59036 64 aa11.87□□□□□ -0.51
CASC4-209ENST00000559222 A0A087WYN8 130 aa11.86□□□□□ -0.51
CASC4-209ENST00000559222 UNQ6190/PRO20217Q6UXQ8 127 aa11.86□□□□□ -0.51
CASC4-209ENST00000559222 LINC01549A6NIU2 74 aa11.85□□□□□ -0.51
CASC4-209ENST00000559222 RAB5BP61020 215 aa11.85□□□□□ -0.51
CASC4-209ENST00000559222 PMVKQ15126 192 aa11.85□□□□□ -0.51
CASC4-209ENST00000559222 MAJINQ3KP22 176 aa11.85□□□□□ -0.51
CASC4-209ENST00000559222 C2orf82Q6UX34 121 aa11.85□□□□□ -0.51
CASC4-209ENST00000559222 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.84□□□□□ -0.51
CASC4-209ENST00000559222 FAM229AH3BQW9 127 aa11.84□□□□□ -0.51
CASC4-209ENST00000559222 KRTAP10-4P60372 401 aaPredicted RBP11.84□□□□□ -0.51
CASC4-209ENST00000559222 HERVK_113P63121 156 aa11.84□□□□□ -0.51
CASC4-209ENST00000559222 GEMIN7Q9H840 131 aaKnown RBP11.84□□□□□ -0.51
CASC4-209ENST00000559222 LINC01561Q8N1V8 128 aa11.83□□□□□ -0.52
CASC4-209ENST00000559222 LINC00469Q8N7U9 141 aa11.83□□□□□ -0.52
CASC4-209ENST00000559222 C6orf48Q9UBA6 75 aa11.83□□□□□ -0.52
CASC4-209ENST00000559222 TINCRA0A1B0GVN0 87 aa11.82□□□□□ -0.52
CASC4-209ENST00000559222 NDUFA6P56556 154 aa11.82□□□□□ -0.52
CASC4-209ENST00000559222 FAM19A2Q8N3H0 131 aa11.82□□□□□ -0.52
CASC4-209ENST00000559222 CHCHD1Q96BP2 118 aaKnown RBP11.82□□□□□ -0.52
CASC4-209ENST00000559222 TOMM7Q9P0U1 55 aa11.82□□□□□ -0.52
CASC4-209ENST00000559222 IGLV5-45A0A087WSX0 123 aa11.81□□□□□ -0.52
CASC4-209ENST00000559222 SMIM1B2RUZ4 78 aa11.81□□□□□ -0.52
CASC4-209ENST00000559222 NDUFA1O15239 70 aa11.81□□□□□ -0.52
CASC4-209ENST00000559222 NUPR1O60356 82 aa11.81□□□□□ -0.52
CASC4-209ENST00000559222 GAGE2BQ13066 116 aa11.81□□□□□ -0.52
CASC4-209ENST00000559222 BAGE3Q86Y29 109 aa11.81□□□□□ -0.52
CASC4-209ENST00000559222 DPH3Q96FX2 82 aa11.81□□□□□ -0.52
CASC4-209ENST00000559222 MRPL35Q9NZE8 188 aaKnown RBP11.81□□□□□ -0.52
CASC4-209ENST00000559222 PLAC8Q9NZF1 115 aa11.81□□□□□ -0.52
CASC4-209ENST00000559222 LOC107984640A0A0U1RRK4 108 aa11.8□□□□□ -0.52
CASC4-209ENST00000559222 SERF1AO75920 110 aa11.8□□□□□ -0.52
CASC4-209ENST00000559222 PTTG1IPP53801 180 aa11.8□□□□□ -0.52
CASC4-209ENST00000559222 SEC11AP67812 179 aa11.8□□□□□ -0.52
CASC4-209ENST00000559222 STPG4Q8N801 248 aa11.8□□□□□ -0.52
CASC4-209ENST00000559222 PKHD1L1Q86WI1 4243 aa11.79□□□□□ -0.52
CASC4-209ENST00000559222 SPINK8P0C7L1 97 aa11.79□□□□□ -0.52
CASC4-209ENST00000559222 IGLC3P0DOY3 106 aa11.79□□□□□ -0.52
CASC4-209ENST00000559222 RPL18AQ02543 176 aaKnown RBP11.79□□□□□ -0.52
CASC4-209ENST00000559222 SRRM2Q9UQ35 2752 aaKnown RBP11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 86.2 ms