RNA–Protein interactions for RNA: ENST00000559100.1

GABPB1-209, Transcript of GA binding protein transcription factor subunit beta 1, humanhuman

TSL 3

Gene GABPB1, Length 290 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GABPB1-209ENST00000559100 PIEZO1Q92508 2521 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 CACNA1HO95180 2353 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 ANKRD36BQ8N2N9 1353 aa0.42□□□□□ -2.34
GABPB1-209ENST00000559100 FRAS1Q86XX4 4008 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 POLA1P09884 1462 aaPredicted RBP0.41□□□□□ -2.34
GABPB1-209ENST00000559100 FYCO1Q9BQS8 1478 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 CHD9Q3L8U1 2897 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 VPS8Q8N3P4 1428 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 ABCA12Q86UK0 2595 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 TRBV6-1A0A0K0K1D8 114 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 C7orf77A4D0Y5 90 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 SERP2Q8N6R1 65 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 KDM3BQ7LBC6 1761 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 RAPGEF6Q8TEU7 1601 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 CCNB3Q8WWL7 1395 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 ANK2Q01484 3957 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 ABCA3Q99758 1704 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 MLH3Q9UHC1 1453 aa0.41□□□□□ -2.34
GABPB1-209ENST00000559100 MDN1Q9NU22 5596 aa0.4□□□□□ -2.34
GABPB1-209ENST00000559100 TOPAZ1Q8N9V7 1692 aa0.4□□□□□ -2.34
GABPB1-209ENST00000559100 ARHGEF12Q9NZN5 1544 aa0.4□□□□□ -2.35
GABPB1-209ENST00000559100 TRBV25-1A0A075B6N4 114 aa0.4□□□□□ -2.35
GABPB1-209ENST00000559100 SPRR4Q96PI1 79 aa0.4□□□□□ -2.35
GABPB1-209ENST00000559100 TRGV9Q99603 122 aa0.4□□□□□ -2.35
GABPB1-209ENST00000559100 SNHG12Q9BXW3 62 aa0.4□□□□□ -2.35
GABPB1-209ENST00000559100 BTAF1O14981 1849 aa0.4□□□□□ -2.35
GABPB1-209ENST00000559100 GAPVD1Q14C86 1478 aa0.4□□□□□ -2.35
GABPB1-209ENST00000559100 TEX14Q8IWB6 1497 aa0.4□□□□□ -2.35
GABPB1-209ENST00000559100 ARHGEF5Q12774 1597 aa0.4□□□□□ -2.35
GABPB1-209ENST00000559100 CACNA1EQ15878 2313 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 FAM208BQ5VWN6 2430 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 NSD3Q9BZ95 1437 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 A0A087WVE0 104 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 C10orf142B7Z368 130 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 H3BQF6 201 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 KRTAP2-3P0C7H8 128 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 GNGT1P63211 74 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 LCN9Q8WX39 176 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 KRTAP2-4Q9BYR9 128 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 KRTAP2-1Q9BYU5 128 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 ADGRL2O95490 1459 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 ABCC10Q5T3U5 1492 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 USP24Q9UPU5 2620 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 TPRP12270 2363 aaKnown RBP0.39□□□□□ -2.35
GABPB1-209ENST00000559100 TENM3Q9P273 2699 aa0.39□□□□□ -2.35
GABPB1-209ENST00000559100 DIP2CQ9Y2E4 1556 aa0.38□□□□□ -2.35
GABPB1-209ENST00000559100 SYS1-DBNDD2H3BUS1 97 aa0.38□□□□□ -2.35
GABPB1-209ENST00000559100 ZNF720Q7Z2F6 126 aa0.38□□□□□ -2.35
GABPB1-209ENST00000559100 LINC00846Q9NV44 126 aa0.38□□□□□ -2.35
GABPB1-209ENST00000559100 MUC16Q8WXI7 14507 aa0.38□□□□□ -2.35
GABPB1-209ENST00000559100 TNCP24821 2201 aa0.38□□□□□ -2.35
GABPB1-209ENST00000559100 CHD1O14646 1710 aa0.38□□□□□ -2.35
GABPB1-209ENST00000559100 PRDM15P57071 1507 aaPredicted RBP0.38□□□□□ -2.35
GABPB1-209ENST00000559100 F8P00451 2351 aa0.38□□□□□ -2.35
GABPB1-209ENST00000559100 SCN7AQ01118 1682 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 C1orf167Q5SNV9 1468 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 PLEKHH2Q8IVE3 1493 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 CELSR2Q9HCU4 2923 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 PLXNB2O15031 1838 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 TRBV7-4A0A0J9YYF1 115 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 H7BZZ5 65 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 ETDBQ3ZM63 59 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 KRTAP5-10Q6L8G5 202 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 DEFB107AQ8IZN7 70 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 ZNF292O60281 2723 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 CACNA1CQ13936 2221 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 NAV2Q8IVL1 2488 aa0.37□□□□□ -2.35
GABPB1-209ENST00000559100 ZFYVE26Q68DK2 2539 aa0.36□□□□□ -2.35
GABPB1-209ENST00000559100 MAGI1Q96QZ7 1491 aaPredicted RBP0.36□□□□□ -2.35
GABPB1-209ENST00000559100 RAPGEF2Q9Y4G8 1499 aa0.36□□□□□ -2.35
GABPB1-209ENST00000559100 PDCD11Q14690 1871 aaKnown RBP0.36□□□□□ -2.35
GABPB1-209ENST00000559100 TRBV7-7A0A0K0K1E9 115 aa0.36□□□□□ -2.35
GABPB1-209ENST00000559100 A0A1B0GU69 56 aa0.36□□□□□ -2.35
GABPB1-209ENST00000559100 H0Y9P7 68 aa0.36□□□□□ -2.35
GABPB1-209ENST00000559100 I3L2K1 104 aa0.36□□□□□ -2.35
GABPB1-209ENST00000559100 GYPAP02724 150 aa0.36□□□□□ -2.35
GABPB1-209ENST00000559100 ARMS2P0C7Q2 107 aa0.36□□□□□ -2.35
GABPB1-209ENST00000559100 WFDC2Q14508 124 aa0.36□□□□□ -2.35
GABPB1-209ENST00000559100 NLRP1Q9C000 1473 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 AHCTF1Q8WYP5 2266 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 LINC00959A0A1B0GUT2 108 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 D6R8Y8 96 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 LEPROTL1O95214 131 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 SMIM11AP58511 58 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 C6orf201Q7Z4U5 140 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 MUSTN1Q8IVN3 82 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 V9GYS6 101 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 SPTBN2O15020 2390 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 BIVM-ERCC5R4GMW8 1640 aa0.35□□□□□ -2.35
GABPB1-209ENST00000559100 F8WEM9 126 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 HMGN3Q15651 99 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 DEFB109BQ30KR1 87 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 OTOGQ6ZRI0 2925 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 FXYD6Q9H0Q3 95 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 BAZ1AQ9NRL2 1556 aaPredicted RBP0.34□□□□□ -2.36
GABPB1-209ENST00000559100 SETBP1Q9Y6X0 1596 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 U3KQA8 63 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 KMT2DO14686 5537 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 AKAP12Q02952 1782 aa0.34□□□□□ -2.36
GABPB1-209ENST00000559100 LAMC1P11047 1609 aa0.34□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 39.2 ms