RNA–Protein interactions for RNA: ENST00000558771.1

LRRC28-208, Transcript of leucine rich repeat containing 28, humanhuman

TSL 4

Gene LRRC28, Length 586 nt, Biotype processed transcript, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-208ENST00000558771 TMUB2Q71RG4 321 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 FAM19A5Q7Z5A7 132 aaPredicted RBP3.18□□□□□ -1.9
LRRC28-208ENST00000558771 KRTAP7-1Q8IUC3 87 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 RETNLBQ9BQ08 111 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 CDC42SE2Q9NRR3 84 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 NDUFA13Q9P0J0 144 aa3.18□□□□□ -1.9
LRRC28-208ENST00000558771 A0A087X002 238 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 A0A1B0GV50 99 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 A4D1N5 150 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 PFDN1O60925 122 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 PMCHP20382 165 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 RPL35P42766 123 aaKnown RBP3.17□□□□□ -1.9
LRRC28-208ENST00000558771 SNRPEP62304 92 aaKnown RBP3.17□□□□□ -1.9
LRRC28-208ENST00000558771 UBE2BP63146 152 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 SPAG11BQ08648 103 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 LCE1EQ5T753 118 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 C5orf38Q86SI9 138 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 MRPL52Q86TS9 123 aaKnown RBP3.17□□□□□ -1.9
LRRC28-208ENST00000558771 S100ZQ8WXG8 99 aa3.17□□□□□ -1.9
LRRC28-208ENST00000558771 FXYD6-FXYD2A0A087WZ82 144 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 XKRY2A2RUG3 117 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 C1orf196B1AJZ1 125 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 G3V3Q6 166 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 I3L3M4 83 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 M0QXV9 152 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 ZNF861PO60384 105 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 TSHBP01222 138 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 IFNA1P01562 189 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 CTRLP40313 264 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 FOXA3P55318 350 aaPredicted RBP3.16□□□□□ -1.9
LRRC28-208ENST00000558771 LINC01547P58512 204 aaPredicted RBP3.16□□□□□ -1.9
LRRC28-208ENST00000558771 TPRXLQ17RH7 258 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 CENPWQ5EE01 88 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 LINC00299Q6ZSB3 139 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 C9orf62Q8N4C0 152 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 TYMSOSQ8TAI1 123 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 SFT2D1Q8WV19 159 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 MRAP2Q96G30 205 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 IMMP2LQ96T52 175 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 CNFNQ9BYD5 112 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 TMEM242Q9NWH2 141 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 MRPL35Q9NZE8 188 aaKnown RBP3.16□□□□□ -1.9
LRRC28-208ENST00000558771 ALG5Q9Y673 324 aa3.16□□□□□ -1.9
LRRC28-208ENST00000558771 TRAV13-1A0A0B4J241 112 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 TRBV6-5A0A0K0K1A5 114 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 C7orf77A4D0Y5 90 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 TLX1NBP0CAT3 122 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 S100A1P23297 94 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 UBE2V1Q13404 147 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 RNASE13Q5GAN3 156 aaKnown RBP3.15□□□□□ -1.91
LRRC28-208ENST00000558771 KCNRGQ8N5I3 272 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 MBD3L1Q8WWY6 194 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 C11orf52Q96A22 123 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 RNASE7Q9H1E1 156 aaKnown RBP3.15□□□□□ -1.91
LRRC28-208ENST00000558771 CYTL1Q9NRR1 136 aa3.15□□□□□ -1.91
LRRC28-208ENST00000558771 IGLV7-46A0A075B6I9 117 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 RAB19A4D1S5 217 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 NDUFA1O15239 70 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 CRYGAP11844 174 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 RPL24P83731 157 aaKnown RBP3.14□□□□□ -1.91
LRRC28-208ENST00000558771 NDUFA5Q16718 116 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 TEX261Q6UWH6 196 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 UNQ6190/PRO20217Q6UXQ8 127 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 OR10D4PQ8NGN7 298 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 FAM213BQ8TBF2 198 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 ORAOV1Q8WV07 137 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 SMDT1Q9H4I9 107 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 C6orf48Q9UBA6 75 aa3.14□□□□□ -1.91
LRRC28-208ENST00000558771 CHTOPQ9Y3Y2 248 aaKnown RBP3.14□□□□□ -1.91
LRRC28-208ENST00000558771 TRBV20OR9-2A0A075B6H5 130 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 IGLV5-45A0A087WSX0 123 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 F8WDY8 70 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 NUPR1O60356 82 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 S100A6P06703 90 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 GIPP09681 153 aaPredicted RBP3.13□□□□□ -1.91
LRRC28-208ENST00000558771 GNG4P50150 75 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 POLR2KP53803 58 aaKnown RBP3.13□□□□□ -1.91
LRRC28-208ENST00000558771 CCL20P78556 96 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 TMEM241Q24JQ0 296 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 KRTAP13-2Q52LG2 175 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 C9orf129Q5T035 196 aaKnown RBP3.13□□□□□ -1.91
LRRC28-208ENST00000558771 Q6ZUT4 128 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 LINC00173Q6ZV60 143 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 SMIM15Q7Z3B0 74 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 SMIM12Q96EX1 92 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 KRTAP4-1Q9BYQ7 146 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 ST20Q9HBF5 79 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 ANAPC11Q9NYG5 84 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 UBE2D4Q9Y2X8 147 aa3.13□□□□□ -1.91
LRRC28-208ENST00000558771 CSDC2Q9Y534 153 aaKnown RBP3.13□□□□□ -1.91
LRRC28-208ENST00000558771 TRBV27A0A0K0K1C4 114 aa3.12□□□□□ -1.91
LRRC28-208ENST00000558771 A0A1B0GVG6 124 aa3.12□□□□□ -1.91
LRRC28-208ENST00000558771 LINC00304Q8N9R0 145 aa3.12□□□□□ -1.91
LRRC28-208ENST00000558771 PPDPFQ9H3Y8 114 aa3.12□□□□□ -1.91
LRRC28-208ENST00000558771 MANBALQ9NQG1 85 aa3.12□□□□□ -1.91
LRRC28-208ENST00000558771 BIN3Q9NQY0 253 aa3.12□□□□□ -1.91
LRRC28-208ENST00000558771 GNG13Q9P2W3 67 aa3.12□□□□□ -1.91
LRRC28-208ENST00000558771 IGHV3OR16-9A0A0B4J2B5 98 aa3.11□□□□□ -1.91
LRRC28-208ENST00000558771 UMAD1C9J7I0 102 aa3.11□□□□□ -1.91
LRRC28-208ENST00000558771 ARPC5O15511 151 aa3.11□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 47.1 ms