RNA–Protein interactions for RNA: ENST00000558662.5

HMBOX1-212, Transcript of homeobox containing 1, humanhuman

TSL 5 BASIC

Gene HMBOX1, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMBOX1-212ENST00000558662 HTN1P15515 57 aa11.42□□□□□ -0.58
HMBOX1-212ENST00000558662 ANKHD1Q8IWZ3 2542 aaKnown RBP11.41□□□□□ -0.58
HMBOX1-212ENST00000558662 FP248Q71RG6 208 aaPredicted RBP11.41□□□□□ -0.58
HMBOX1-212ENST00000558662 IGHV4-38-2P0DP08 117 aa11.41□□□□□ -0.58
HMBOX1-212ENST00000558662 NTM-AS1Q6ZSK4 140 aa11.41□□□□□ -0.58
HMBOX1-212ENST00000558662 BPESC1Q9GZL8 116 aa11.41□□□□□ -0.58
HMBOX1-212ENST00000558662 DCHS1Q96JQ0 3298 aa11.4□□□□□ -0.58
HMBOX1-212ENST00000558662 A0A087WZ39 114 aa11.4□□□□□ -0.58
HMBOX1-212ENST00000558662 SLPIP03973 132 aa11.39□□□□□ -0.59
HMBOX1-212ENST00000558662 RPL35AP18077 110 aaKnown RBP11.39□□□□□ -0.59
HMBOX1-212ENST00000558662 LY6EQ16553 131 aa11.39□□□□□ -0.59
HMBOX1-212ENST00000558662 Q6ZQT0 140 aa11.39□□□□□ -0.59
HMBOX1-212ENST00000558662 IL17DQ8TAD2 202 aa11.39□□□□□ -0.59
HMBOX1-212ENST00000558662 V9GYY9 64 aa11.39□□□□□ -0.59
HMBOX1-212ENST00000558662 CCL21O00585 134 aa11.39□□□□□ -0.59
HMBOX1-212ENST00000558662 IGHV3OR16-9A0A0B4J2B5 98 aa11.38□□□□□ -0.59
HMBOX1-212ENST00000558662 TRBV7-6A0A0J9YX20 115 aa11.38□□□□□ -0.59
HMBOX1-212ENST00000558662 ZNF561-AS1K7EIQ3 104 aa11.38□□□□□ -0.59
HMBOX1-212ENST00000558662 DEFB131AP59861 70 aa11.38□□□□□ -0.59
HMBOX1-212ENST00000558662 RBM3P98179 157 aaKnown RBP11.38□□□□□ -0.59
HMBOX1-212ENST00000558662 LAMTOR3Q9UHA4 124 aa11.38□□□□□ -0.59
HMBOX1-212ENST00000558662 DMXL2Q8TDJ6 3036 aa11.37□□□□□ -0.59
HMBOX1-212ENST00000558662 F8WEM9 126 aa11.37□□□□□ -0.59
HMBOX1-212ENST00000558662 LINC01547P58512 204 aaPredicted RBP11.37□□□□□ -0.59
HMBOX1-212ENST00000558662 ZFHX4Q86UP3 3567 aa11.36□□□□□ -0.59
HMBOX1-212ENST00000558662 C9orf66Q5T8R8 295 aa11.36□□□□□ -0.59
HMBOX1-212ENST00000558662 C6orf223Q8N319 242 aa11.36□□□□□ -0.59
HMBOX1-212ENST00000558662 WFDC9Q8NEX5 89 aa11.36□□□□□ -0.59
HMBOX1-212ENST00000558662 TOMM7Q9P0U1 55 aa11.36□□□□□ -0.59
HMBOX1-212ENST00000558662 C1orf195Q5TG92 126 aa11.36□□□□□ -0.59
HMBOX1-212ENST00000558662 LOC400499M0QZD8 3231 aa11.35□□□□□ -0.59
HMBOX1-212ENST00000558662 BRD3OSQ6XYD6 125 aa11.35□□□□□ -0.59
HMBOX1-212ENST00000558662 COX17Q14061 63 aa11.34□□□□□ -0.59
HMBOX1-212ENST00000558662 TRBV7-4A0A0J9YYF1 115 aa11.33□□□□□ -0.6
HMBOX1-212ENST00000558662 MIFP14174 115 aa11.33□□□□□ -0.6
HMBOX1-212ENST00000558662 MUC7Q8TAX7 377 aa11.33□□□□□ -0.6
HMBOX1-212ENST00000558662 UBE2E2Q96LR5 201 aa11.33□□□□□ -0.6
HMBOX1-212ENST00000558662 ASPMQ8IZT6 3477 aa11.32□□□□□ -0.6
HMBOX1-212ENST00000558662 ADORA2A-AS1P86434 159 aa11.32□□□□□ -0.6
HMBOX1-212ENST00000558662 Q6ZVQ6 151 aa11.32□□□□□ -0.6
HMBOX1-212ENST00000558662 Q8IZM0 81 aa11.32□□□□□ -0.6
HMBOX1-212ENST00000558662 SEC61GP60059 68 aa11.31□□□□□ -0.6
HMBOX1-212ENST00000558662 PKIGQ9Y2B9 76 aa11.31□□□□□ -0.6
HMBOX1-212ENST00000558662 TACC2O95359 2948 aa11.31□□□□□ -0.6
HMBOX1-212ENST00000558662 RMI2Q96E14 147 aa11.31□□□□□ -0.6
HMBOX1-212ENST00000558662 ACACAQ13085 2346 aa11.31□□□□□ -0.6
HMBOX1-212ENST00000558662 MAP1BP46821 2468 aaKnown RBP11.3□□□□□ -0.6
HMBOX1-212ENST00000558662 NANOS2P60321 138 aaKnown RBP11.3□□□□□ -0.6
HMBOX1-212ENST00000558662 C6orf226Q5I0X4 101 aa11.3□□□□□ -0.6
HMBOX1-212ENST00000558662 PTPRQQ9UMZ3 2332 aa11.3□□□□□ -0.6
HMBOX1-212ENST00000558662 TRGV1A0A0A0MS02 117 aa11.29□□□□□ -0.6
HMBOX1-212ENST00000558662 LINC00575Q6W349 94 aa11.29□□□□□ -0.6
HMBOX1-212ENST00000558662 DYNLRB2Q8TF09 96 aa11.29□□□□□ -0.6
HMBOX1-212ENST00000558662 A0A096LNT2 108 aa11.28□□□□□ -0.6
HMBOX1-212ENST00000558662 WFDC11Q8NEX6 87 aa11.28□□□□□ -0.6
HMBOX1-212ENST00000558662 MAP6D1Q9H9H5 199 aa11.28□□□□□ -0.6
HMBOX1-212ENST00000558662 ANKRD11Q6UB99 2663 aaPredicted RBP11.28□□□□□ -0.6
HMBOX1-212ENST00000558662 BRK1Q8WUW1 75 aa11.28□□□□□ -0.6
HMBOX1-212ENST00000558662 CEP295Q9C0D2 2601 aa11.28□□□□□ -0.6
HMBOX1-212ENST00000558662 TRAV10A0A0B4J240 114 aa11.27□□□□□ -0.61
HMBOX1-212ENST00000558662 HAMPP81172 84 aa11.27□□□□□ -0.61
HMBOX1-212ENST00000558662 SNURFQ9Y675 71 aa11.27□□□□□ -0.61
HMBOX1-212ENST00000558662 AVPP01185 164 aa11.26□□□□□ -0.61
HMBOX1-212ENST00000558662 SMG1Q96Q15 3661 aaKnown RBP11.26□□□□□ -0.61
HMBOX1-212ENST00000558662 SPENQ96T58 3664 aaKnown RBP11.26□□□□□ -0.61
HMBOX1-212ENST00000558662 MGAQ8IWI9 3026 aa11.26□□□□□ -0.61
HMBOX1-212ENST00000558662 Q8N3U1 123 aa11.25□□□□□ -0.61
HMBOX1-212ENST00000558662 SPTBN4Q9H254 2564 aa11.24□□□□□ -0.61
HMBOX1-212ENST00000558662 PRM2P04554 102 aa11.24□□□□□ -0.61
HMBOX1-212ENST00000558662 Q6ZTI0 123 aa11.24□□□□□ -0.61
HMBOX1-212ENST00000558662 TMEM254Q8TBM7 123 aa11.24□□□□□ -0.61
HMBOX1-212ENST00000558662 PIEZO1Q92508 2521 aa11.24□□□□□ -0.61
HMBOX1-212ENST00000558662 A0A1W2PPR1 153 aa11.23□□□□□ -0.61
HMBOX1-212ENST00000558662 NREPQ16612 68 aa11.23□□□□□ -0.61
HMBOX1-212ENST00000558662 TRBV6-8A0A0A6YYG3 113 aa11.23□□□□□ -0.61
HMBOX1-212ENST00000558662 CDSNQ15517 529 aa11.23□□□□□ -0.61
HMBOX1-212ENST00000558662 IGHV4-59P01825 116 aa11.22□□□□□ -0.61
HMBOX1-212ENST00000558662 ESRGQ1W209 222 aa11.22□□□□□ -0.61
HMBOX1-212ENST00000558662 CACNA1AO00555 2505 aa11.22□□□□□ -0.61
HMBOX1-212ENST00000558662 LINC00959A0A1B0GUT2 108 aa11.21□□□□□ -0.61
HMBOX1-212ENST00000558662 C1orf158Q8N1D5 194 aa11.21□□□□□ -0.61
HMBOX1-212ENST00000558662 C11orf68Q9H3H3 251 aaKnown RBP11.21□□□□□ -0.61
HMBOX1-212ENST00000558662 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.61
HMBOX1-212ENST00000558662 COL6A6A6NMZ7 2263 aa11.21□□□□□ -0.62
HMBOX1-212ENST00000558662 IGHV4-28A0A0C4DH34 117 aa11.21□□□□□ -0.62
HMBOX1-212ENST00000558662 PLAC8L1A1L4L8 177 aa11.21□□□□□ -0.62
HMBOX1-212ENST00000558662 IGF2RP11717 2491 aa11.2□□□□□ -0.62
HMBOX1-212ENST00000558662 MSMBP08118 114 aa11.2□□□□□ -0.62
HMBOX1-212ENST00000558662 C6orf99Q4VX62 202 aa11.2□□□□□ -0.62
HMBOX1-212ENST00000558662 SPTBN1Q01082 2364 aaKnown RBP11.19□□□□□ -0.62
HMBOX1-212ENST00000558662 BSNQ9UPA5 3926 aa11.19□□□□□ -0.62
HMBOX1-212ENST00000558662 ADGRG4Q8IZF6 3080 aa11.19□□□□□ -0.62
HMBOX1-212ENST00000558662 PRR15Q8IV56 129 aa11.19□□□□□ -0.62
HMBOX1-212ENST00000558662 PRYO14603 147 aa11.18□□□□□ -0.62
HMBOX1-212ENST00000558662 TM2D3Q9BRN9 247 aa11.18□□□□□ -0.62
HMBOX1-212ENST00000558662 IGLV4-60A0A075B6I1 120 aa11.18□□□□□ -0.62
HMBOX1-212ENST00000558662 IGHV4-61A0A0C4DH41 118 aa11.18□□□□□ -0.62
HMBOX1-212ENST00000558662 A0A1B0GUV1 79 aa11.18□□□□□ -0.62
HMBOX1-212ENST00000558662 BPY2O14599 106 aa11.18□□□□□ -0.62
HMBOX1-212ENST00000558662 STHQ8IWL8 128 aa11.18□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 131.9 ms