RNA–Protein interactions for RNA: ENST00000558319.5

SPG11-210, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SPG11, Length 6,426 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-210ENST00000558319 PLAC8L1A1L4L8 177 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 ODF3Q96PU9 254 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 DSCAMO60469 2012 aa10.25□□□□□ -0.77
SPG11-210ENST00000558319 PRR9Q5T870 116 aa10.24□□□□□ -0.77
SPG11-210ENST00000558319 PRYO14603 147 aa10.24□□□□□ -0.77
SPG11-210ENST00000558319 TMEM89A2RUT3 159 aa10.23□□□□□ -0.77
SPG11-210ENST00000558319 PCOTHQ58A44 107 aa10.23□□□□□ -0.77
SPG11-210ENST00000558319 C9orf116Q5BN46 136 aaPredicted RBP10.23□□□□□ -0.77
SPG11-210ENST00000558319 CSDC2Q9Y534 153 aaKnown RBP10.23□□□□□ -0.77
SPG11-210ENST00000558319 FAM208BQ5VWN6 2430 aa10.23□□□□□ -0.77
SPG11-210ENST00000558319 MRPS36P82909 103 aaKnown RBP10.23□□□□□ -0.77
SPG11-210ENST00000558319 M0R378 163 aa10.23□□□□□ -0.77
SPG11-210ENST00000558319 RNASE3P12724 160 aaKnown RBP10.23□□□□□ -0.77
SPG11-210ENST00000558319 Q6ZVQ6 151 aa10.23□□□□□ -0.77
SPG11-210ENST00000558319 ESRGQ1W209 222 aa10.22□□□□□ -0.77
SPG11-210ENST00000558319 A0A087WYN8 130 aa10.22□□□□□ -0.77
SPG11-210ENST00000558319 TRBV7-6A0A0J9YX20 115 aa10.22□□□□□ -0.77
SPG11-210ENST00000558319 C11orf21Q9P2W6 132 aa10.22□□□□□ -0.77
SPG11-210ENST00000558319 LINC00959A0A1B0GUT2 108 aa10.22□□□□□ -0.77
SPG11-210ENST00000558319 ZNF702PQ9H963 129 aa10.22□□□□□ -0.77
SPG11-210ENST00000558319 CREBBPQ92793 2442 aa10.21□□□□□ -0.77
SPG11-210ENST00000558319 PRR3P79522 188 aaKnown RBP10.21□□□□□ -0.77
SPG11-210ENST00000558319 DHRS4-AS1Q9P1J3 65 aa10.21□□□□□ -0.77
SPG11-210ENST00000558319 OTOGLQ3ZCN5 2332 aa10.21□□□□□ -0.78
SPG11-210ENST00000558319 DEFB116Q30KQ4 102 aa10.21□□□□□ -0.78
SPG11-210ENST00000558319 TRAV10A0A0B4J240 114 aa10.2□□□□□ -0.78
SPG11-210ENST00000558319 KRTAP10-9P60411 292 aa10.2□□□□□ -0.78
SPG11-210ENST00000558319 EIF4EBP1Q13541 118 aaPredicted RBP10.2□□□□□ -0.78
SPG11-210ENST00000558319 SHISA2Q6UWI4 295 aa10.2□□□□□ -0.78
SPG11-210ENST00000558319 LINC01006Q8NI28 216 aa10.2□□□□□ -0.78
SPG11-210ENST00000558319 PYGO1Q9Y3Y4 419 aa10.2□□□□□ -0.78
SPG11-210ENST00000558319 ZNF73O43830 326 aaPredicted RBP10.2□□□□□ -0.78
SPG11-210ENST00000558319 NTM-AS1Q6ZSK4 140 aa10.2□□□□□ -0.78
SPG11-210ENST00000558319 CRIP3Q6Q6R5 217 aa10.19□□□□□ -0.78
SPG11-210ENST00000558319 SPINK1P00995 79 aa10.19□□□□□ -0.78
SPG11-210ENST00000558319 EXPH5Q8NEV8 1989 aa10.19□□□□□ -0.78
SPG11-210ENST00000558319 CD164L2Q6UWJ8 174 aa10.19□□□□□ -0.78
SPG11-210ENST00000558319 TRBV6-4A0A1B0GX49 114 aa10.18□□□□□ -0.78
SPG11-210ENST00000558319 CRYGAP11844 174 aa10.18□□□□□ -0.78
SPG11-210ENST00000558319 PLA2G2AP14555 144 aa10.18□□□□□ -0.78
SPG11-210ENST00000558319 TRBV7-7A0A0K0K1E9 115 aa10.17□□□□□ -0.78
SPG11-210ENST00000558319 LINC01547P58512 204 aaPredicted RBP10.17□□□□□ -0.78
SPG11-210ENST00000558319 IGLV4-69A0A075B6H9 119 aa10.17□□□□□ -0.78
SPG11-210ENST00000558319 LINC00310P59036 64 aa10.17□□□□□ -0.78
SPG11-210ENST00000558319 CEP192Q8TEP8 1941 aa10.16□□□□□ -0.78
SPG11-210ENST00000558319 COX6A2Q02221 97 aa10.16□□□□□ -0.78
SPG11-210ENST00000558319 Q8N3U1 123 aa10.16□□□□□ -0.78
SPG11-210ENST00000558319 Q8N814 137 aa10.16□□□□□ -0.78
SPG11-210ENST00000558319 Q9UF83 564 aa10.16□□□□□ -0.78
SPG11-210ENST00000558319 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP10.15□□□□□ -0.78
SPG11-210ENST00000558319 ALPK3Q96L96 1907 aa10.15□□□□□ -0.78
SPG11-210ENST00000558319 EML5Q05BV3 1969 aa10.15□□□□□ -0.78
SPG11-210ENST00000558319 MUC6Q6W4X9 2439 aa10.15□□□□□ -0.78
SPG11-210ENST00000558319 TSPEAR-AS2P59090 65 aa10.14□□□□□ -0.79
SPG11-210ENST00000558319 TECTAO75443 2155 aa10.14□□□□□ -0.79
SPG11-210ENST00000558319 URB1-AS1Q96HZ7 61 aa10.14□□□□□ -0.79
SPG11-210ENST00000558319 IGHV6-1A0A0B4J1U7 121 aa10.14□□□□□ -0.79
SPG11-210ENST00000558319 RAI1Q7Z5J4 1906 aaPredicted RBP10.13□□□□□ -0.79
SPG11-210ENST00000558319 AVPP01185 164 aa10.13□□□□□ -0.79
SPG11-210ENST00000558319 C10orf25Q5T742 122 aa10.13□□□□□ -0.79
SPG11-210ENST00000558319 CUL9Q8IWT3 2517 aa10.13□□□□□ -0.79
SPG11-210ENST00000558319 POLR2KP53803 58 aaKnown RBP10.13□□□□□ -0.79
SPG11-210ENST00000558319 ZNF580Q9UK33 172 aa10.13□□□□□ -0.79
SPG11-210ENST00000558319 CYSRT1A8MQ03 144 aa10.13□□□□□ -0.79
SPG11-210ENST00000558319 SORL1Q92673 2214 aa10.12□□□□□ -0.79
SPG11-210ENST00000558319 HIVEP2P31629 2446 aa10.12□□□□□ -0.79
SPG11-210ENST00000558319 C1orf137Q5JT78 98 aa10.12□□□□□ -0.79
SPG11-210ENST00000558319 FBXL19-AS1Q494R0 122 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 ADAMTSL4-AS1Q5T5F5 129 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 C6orf223Q8N319 242 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 NUPR2A6NF83 97 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 IGIPA6NJ69 53 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 COX17Q14061 63 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 C11orf71Q6IPW1 123 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 LINC00574Q9H8X3 128 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 IGLV5-52A0A0A0MRZ9 124 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 UNQ6190/PRO20217Q6UXQ8 127 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 LINC00575Q6W349 94 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 CDC42SE2Q9NRR3 84 aa10.11□□□□□ -0.79
SPG11-210ENST00000558319 COL4A4P53420 1690 aaPredicted RBP10.1□□□□□ -0.79
SPG11-210ENST00000558319 TRBV10-3A0A0K0K1G6 114 aa10.1□□□□□ -0.79
SPG11-210ENST00000558319 H0Y9P7 68 aa10.1□□□□□ -0.79
SPG11-210ENST00000558319 ZNF706Q9Y5V0 76 aaPredicted RBP10.1□□□□□ -0.79
SPG11-210ENST00000558319 C4orf26Q17RF5 130 aa10.1□□□□□ -0.79
SPG11-210ENST00000558319 LINC01556Q5JQF7 62 aa10.09□□□□□ -0.79
SPG11-210ENST00000558319 SERTAD4-AS1Q5TG53 156 aa10.09□□□□□ -0.79
SPG11-210ENST00000558319 Q8IZM0 81 aa10.08□□□□□ -0.8
SPG11-210ENST00000558319 ATRXP46100 2492 aa10.08□□□□□ -0.8
SPG11-210ENST00000558319 LINC00242Q5T6M2 205 aa10.08□□□□□ -0.8
SPG11-210ENST00000558319 A8MTW9 85 aa10.07□□□□□ -0.8
SPG11-210ENST00000558319 PTPN13Q12923 2485 aa10.07□□□□□ -0.8
SPG11-210ENST00000558319 LELP1Q5T871 98 aa10.06□□□□□ -0.8
SPG11-210ENST00000558319 Q6ZTC4 211 aa10.06□□□□□ -0.8
SPG11-210ENST00000558319 RPL28P46779 137 aaKnown RBP10.06□□□□□ -0.8
SPG11-210ENST00000558319 PSMG3-AS1Q96PY0 264 aa10.06□□□□□ -0.8
SPG11-210ENST00000558319 LINC00846Q9NV44 126 aa10.05□□□□□ -0.8
SPG11-210ENST00000558319 KLLNB2CW77 178 aa10.05□□□□□ -0.8
SPG11-210ENST00000558319 SMIM1B2RUZ4 78 aa10.05□□□□□ -0.8
SPG11-210ENST00000558319 SBSPONQ8IVN8 264 aa10.05□□□□□ -0.8
SPG11-210ENST00000558319 TMEM254Q8TBM7 123 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms