RNA–Protein interactions for RNA: ENST00000558172.5

LRRC28-204, Transcript of leucine rich repeat containing 28, humanhuman

TSL 5

Gene LRRC28, Length 644 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRC28-204ENST00000558172 IFI27L1Q96BM0 104 aa6.91□□□□□ -1.3
LRRC28-204ENST00000558172 CST9LQ9H4G1 147 aa6.91□□□□□ -1.3
LRRC28-204ENST00000558172 IGHV3OR16-9A0A0B4J2B5 98 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 USP17L23D6RBM5 183 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 COX7A2LO14548 114 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 PRSS1P07477 247 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 MALP21145 153 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 NDUFA6P56556 154 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 HERVK_113P63121 156 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 ZC2HC1BQ5TFG8 222 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 NTN5Q8WTR8 489 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-204ENST00000558172 PACRGQ96M98 296 aaPredicted RBP6.9□□□□□ -1.3
LRRC28-204ENST00000558172 PGPEP1Q9NXJ5 209 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 HSPB8Q9UJY1 196 aa6.9□□□□□ -1.3
LRRC28-204ENST00000558172 TRAV12-1A0A0B4J245 112 aa6.89□□□□□ -1.31
LRRC28-204ENST00000558172 IGHV1-58A0A0C4DH39 117 aa6.89□□□□□ -1.31
LRRC28-204ENST00000558172 TINCRA0A1B0GVN0 87 aa6.89□□□□□ -1.31
LRRC28-204ENST00000558172 LECT2O14960 151 aa6.89□□□□□ -1.31
LRRC28-204ENST00000558172 APOMO95445 188 aa6.89□□□□□ -1.31
LRRC28-204ENST00000558172 WFDC2Q14508 124 aa6.89□□□□□ -1.31
LRRC28-204ENST00000558172 LINC01561Q8N1V8 128 aa6.89□□□□□ -1.31
LRRC28-204ENST00000558172 GEMIN7Q9H840 131 aaKnown RBP6.89□□□□□ -1.31
LRRC28-204ENST00000558172 DNAH5Q8TE73 4624 aa6.89□□□□□ -1.31
LRRC28-204ENST00000558172 COX6A2Q02221 97 aa6.88□□□□□ -1.31
LRRC28-204ENST00000558172 CDPF1Q6NVV7 123 aa6.88□□□□□ -1.31
LRRC28-204ENST00000558172 SPATA12Q7Z6I5 190 aa6.88□□□□□ -1.31
LRRC28-204ENST00000558172 C5orf38Q86SI9 138 aa6.88□□□□□ -1.31
LRRC28-204ENST00000558172 HECTD4Q9Y4D8 3996 aa6.88□□□□□ -1.31
LRRC28-204ENST00000558172 A0A087WZ39 114 aa6.87□□□□□ -1.31
LRRC28-204ENST00000558172 A0A0J9YXV3 536 aa6.87□□□□□ -1.31
LRRC28-204ENST00000558172 S100A6P06703 90 aa6.87□□□□□ -1.31
LRRC28-204ENST00000558172 FABP4P15090 132 aa6.87□□□□□ -1.31
LRRC28-204ENST00000558172 C15orf56Q8N910 161 aa6.87□□□□□ -1.31
LRRC28-204ENST00000558172 GVQW2A0A096LPI5 108 aaPredicted RBP6.86□□□□□ -1.31
LRRC28-204ENST00000558172 hDV102S1A0JD36 115 aa6.86□□□□□ -1.31
LRRC28-204ENST00000558172 IGLC3P0DOY3 106 aa6.86□□□□□ -1.31
LRRC28-204ENST00000558172 OR10D4PQ8NGN7 298 aa6.86□□□□□ -1.31
LRRC28-204ENST00000558172 MAP1LC3CQ9BXW4 147 aa6.86□□□□□ -1.31
LRRC28-204ENST00000558172 CHTOPQ9Y3Y2 248 aaKnown RBP6.86□□□□□ -1.31
LRRC28-204ENST00000558172 DYNC1H1Q14204 4646 aaKnown RBP6.85□□□□□ -1.31
LRRC28-204ENST00000558172 IGLV2-33A0A075B6J2 118 aaPredicted RBP6.85□□□□□ -1.31
LRRC28-204ENST00000558172 IGHV3-64A0A075B6Q5 118 aa6.85□□□□□ -1.31
LRRC28-204ENST00000558172 IGLV5-45A0A087WSX0 123 aa6.85□□□□□ -1.31
LRRC28-204ENST00000558172 IGLV5-52A0A0A0MRZ9 124 aa6.85□□□□□ -1.31
LRRC28-204ENST00000558172 ZNF561-AS1K7EIQ3 104 aa6.85□□□□□ -1.31
LRRC28-204ENST00000558172 KRTAP10-2P60368 255 aa6.85□□□□□ -1.31
LRRC28-204ENST00000558172 CDKN2A-AS1Q9UH64 79 aa6.85□□□□□ -1.31
LRRC28-204ENST00000558172 IGLV4-69A0A075B6H9 119 aa6.84□□□□□ -1.31
LRRC28-204ENST00000558172 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.84□□□□□ -1.31
LRRC28-204ENST00000558172 F8VRH5 84 aa6.84□□□□□ -1.31
LRRC28-204ENST00000558172 F8WDY8 70 aa6.84□□□□□ -1.31
LRRC28-204ENST00000558172 H3BRM9 83 aa6.84□□□□□ -1.31
LRRC28-204ENST00000558172 CNBPP62633 177 aaKnown RBP6.84□□□□□ -1.31
LRRC28-204ENST00000558172 HIGD2BQ4VC39 106 aa6.84□□□□□ -1.31
LRRC28-204ENST00000558172 LINC00469Q8N7U9 141 aa6.84□□□□□ -1.31
LRRC28-204ENST00000558172 CHAC1Q9BUX1 264 aa6.84□□□□□ -1.31
LRRC28-204ENST00000558172 EPPK1P58107 5090 aaKnown RBP6.84□□□□□ -1.32
LRRC28-204ENST00000558172 ORAOV1Q8WV07 137 aa6.83□□□□□ -1.32
LRRC28-204ENST00000558172 C2orf48Q96LS8 159 aa6.83□□□□□ -1.32
LRRC28-204ENST00000558172 MRPL35Q9NZE8 188 aaKnown RBP6.83□□□□□ -1.32
LRRC28-204ENST00000558172 C16orf90A8MZG2 172 aa6.82□□□□□ -1.32
LRRC28-204ENST00000558172 H0Y8G0 127 aa6.82□□□□□ -1.32
LRRC28-204ENST00000558172 SYS1-DBNDD2H3BUS1 97 aa6.82□□□□□ -1.32
LRRC28-204ENST00000558172 GCSHP23434 173 aa6.82□□□□□ -1.32
LRRC28-204ENST00000558172 S100A2P29034 98 aa6.82□□□□□ -1.32
LRRC28-204ENST00000558172 SPAG11BQ08648 103 aa6.82□□□□□ -1.32
LRRC28-204ENST00000558172 ODF1Q14990 250 aa6.82□□□□□ -1.32
LRRC28-204ENST00000558172 C9orf163Q8N9P6 203 aa6.82□□□□□ -1.32
LRRC28-204ENST00000558172 PKHD1P08F94 4074 aa6.82□□□□□ -1.32
LRRC28-204ENST00000558172 C11orf86A6NJI1 115 aa6.81□□□□□ -1.32
LRRC28-204ENST00000558172 PRSS2P07478 247 aa6.81□□□□□ -1.32
LRRC28-204ENST00000558172 ZNF22P17026 224 aaPredicted RBP6.81□□□□□ -1.32
LRRC28-204ENST00000558172 PET117Q6UWS5 81 aa6.81□□□□□ -1.32
LRRC28-204ENST00000558172 HIST3H2BBQ8N257 126 aa6.81□□□□□ -1.32
LRRC28-204ENST00000558172 DNAH8Q96JB1 4490 aa6.81□□□□□ -1.32
LRRC28-204ENST00000558172 LRP1BQ9NZR2 4599 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 C5orf52A6NGY3 159 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 SMIM1B2RUZ4 78 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 DPM2O94777 84 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 SLPIP03973 132 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 PLNP26678 52 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 SNRPEP62304 92 aaKnown RBP6.8□□□□□ -1.32
LRRC28-204ENST00000558172 SYCNQ0VAF6 134 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 KIAA0087Q14695 138 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 TMEM170BQ5T4T1 132 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 Q8IZM0 81 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 CAMK2N2Q96S95 79 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 PKIGQ9Y2B9 76 aa6.8□□□□□ -1.32
LRRC28-204ENST00000558172 NDUFA1O15239 70 aa6.79□□□□□ -1.32
LRRC28-204ENST00000558172 IGKCP01834 107 aa6.79□□□□□ -1.32
LRRC28-204ENST00000558172 SPINK8P0C7L1 97 aa6.79□□□□□ -1.32
LRRC28-204ENST00000558172 C3orf79P0CE67 100 aa6.79□□□□□ -1.32
LRRC28-204ENST00000558172 FUSP35637 526 aaKnown RBP eCLIP6.79□□□□□ -1.32
LRRC28-204ENST00000558172 C6orf226Q5I0X4 101 aa6.79□□□□□ -1.32
LRRC28-204ENST00000558172 LINC00526Q96FQ7 95 aa6.79□□□□□ -1.32
LRRC28-204ENST00000558172 CARD19Q96LW7 228 aa6.79□□□□□ -1.32
LRRC28-204ENST00000558172 TOMM7Q9P0U1 55 aa6.79□□□□□ -1.32
LRRC28-204ENST00000558172 CXCL5P42830 114 aa6.78□□□□□ -1.32
LRRC28-204ENST00000558172 AKR1D1P51857 326 aa6.78□□□□□ -1.32
LRRC28-204ENST00000558172 KRTDAPP60985 99 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms