RNA–Protein interactions for RNA: ENST00000557678.1

GPHN-216, Transcript of gephyrin, humanhuman

TSL 3

Gene GPHN, Length 592 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPHN-216ENST00000557678 PRO1933Q9H354 126 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 SPCS1Q9Y6A9 102 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 ERCC6L2Q5T890 1561 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 EPRSP07814 1512 aaKnown RBP0.47□□□□□ -2.33
GPHN-216ENST00000557678 ADGRL2O95490 1459 aa0.47□□□□□ -2.33
GPHN-216ENST00000557678 MARF1Q9Y4F3 1742 aaKnown RBP0.47□□□□□ -2.33
GPHN-216ENST00000557678 ASH1LQ9NR48 2969 aaKnown RBP0.46□□□□□ -2.34
GPHN-216ENST00000557678 FAM223BA6NKX1 122 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 ZNF815PA8K554 130 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 UQCRHP07919 91 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 ASIPP42127 132 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 SERP2Q8N6R1 65 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 SPRR4Q96PI1 79 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 SNHG12Q9BXW3 62 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 LINC00472Q9H8W2 130 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 CACFD1Q9UGQ2 172 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 FANCAO15360 1455 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 RAPGEF2Q9Y4G8 1499 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 COL4A6Q14031 1691 aa0.46□□□□□ -2.34
GPHN-216ENST00000557678 RB1CC1Q8TDY2 1594 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 RGPD4Q7Z3J3 1758 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 XRN1Q8IZH2 1706 aaKnown RBP0.45□□□□□ -2.34
GPHN-216ENST00000557678 TRBV25-1A0A075B6N4 114 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 TRBV6-1A0A0K0K1D8 114 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 TRBV7-7A0A0K0K1E9 115 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 GYPAP02724 150 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 PSMG4Q5JS54 123 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 KRTAP19-3Q7Z4W3 81 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 Q9H521 79 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 LINC00846Q9NV44 126 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 CACNA1EQ15878 2313 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 IQSEC2Q5JU85 1478 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 PLEKHH2Q8IVE3 1493 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 TTC28Q96AY4 2481 aa0.45□□□□□ -2.34
GPHN-216ENST00000557678 A0A0G2JMZ2 1700 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 ABCC3O15438 1527 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 SHPRHQ149N8 1683 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 UQCRHLA0A096LP55 91 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 A0A0G2JND7 137 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 SYS1-DBNDD2H3BUS1 97 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 SFTA2Q6UW10 78 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 SPINK6Q6UWN8 80 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 V9GYS6 101 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 KIAA1551Q9HCM1 1747 aa0.44□□□□□ -2.34
GPHN-216ENST00000557678 C1orf167Q5SNV9 1468 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 MYO3AQ8NEV4 1616 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 BIVM-ERCC5R4GMW8 1640 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 GPR98Q8WXG9 6306 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 RGPD3A6NKT7 1758 aaPredicted RBP0.43□□□□□ -2.34
GPHN-216ENST00000557678 MYH4Q9Y623 1939 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 H3BQF6 201 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 H7BZZ5 65 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 M0R3E3 92 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 HMGN3Q15651 99 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 C10orf113Q5VZT2 155 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 ZNF720Q7Z2F6 126 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 PRO0255Q9UI72 69 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 MON2Q7Z3U7 1717 aa0.43□□□□□ -2.34
GPHN-216ENST00000557678 APCP25054 2843 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 PAPPAQ13219 1627 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 ATP10BO94823 1461 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 POLA1P09884 1462 aaPredicted RBP0.42□□□□□ -2.34
GPHN-216ENST00000557678 PLCE1Q9P212 2302 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 CEP162Q5TB80 1403 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 BCE1O60756 84 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 FAUP35544 74 aaKnown RBP0.42□□□□□ -2.34
GPHN-216ENST00000557678 PIGYQ3MUY2 71 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 TP53AIP1Q9HCN2 124 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 GOLGA4Q13439 2230 aaKnown RBP0.42□□□□□ -2.34
GPHN-216ENST00000557678 BDP1A6H8Y1 2624 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 PPLO60437 1756 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 LAMC1P11047 1609 aa0.42□□□□□ -2.34
GPHN-216ENST00000557678 NLRP1Q9C000 1473 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 C5P01031 1676 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 TRBV7-4A0A0J9YYF1 115 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 C7orf77A4D0Y5 90 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 SMIM11AP58511 58 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 GNG2P59768 71 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 ALKAL2Q6UX46 152 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 FDCSPQ8NFU4 85 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 LINC01600Q96MT4 127 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 CUX1P39880 1505 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 SPTBN2O15020 2390 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 F8P00451 2351 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 TARBP1Q13395 1621 aaKnown RBP0.41□□□□□ -2.34
GPHN-216ENST00000557678 CCDC141Q6ZP82 1450 aa0.41□□□□□ -2.34
GPHN-216ENST00000557678 SETBP1Q9Y6X0 1596 aa0.4□□□□□ -2.34
GPHN-216ENST00000557678 MUC5ACP98088 5654 aa0.4□□□□□ -2.34
GPHN-216ENST00000557678 ANKRD36A6QL64 1941 aa0.4□□□□□ -2.34
GPHN-216ENST00000557678 TULP4Q9NRJ4 1543 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 DNAJC13O75165 2243 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 TNCP24821 2201 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 SCRIBQ14160 1630 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 NHSL1Q5SYE7 1610 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 A0A087WVE0 104 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 PVALEFA0A1B0GWK0 134 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 PRH1P02810 166 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 ETDBQ3ZM63 59 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 Q8IZM0 81 aa0.4□□□□□ -2.35
GPHN-216ENST00000557678 KNDC1Q76NI1 1749 aa0.4□□□□□ -2.35
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms