RNA–Protein interactions for RNA: ENST00000557658.5

VIPAS39-211, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,562 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-211ENST00000557658 C3orf56Q8N813 242 aa8.36□□□□□ -1.07
VIPAS39-211ENST00000557658 USP9XQ93008 2570 aaPredicted RBP8.36□□□□□ -1.07
VIPAS39-211ENST00000557658 ZANQ9Y493 2812 aa8.36□□□□□ -1.07
VIPAS39-211ENST00000557658 IGKV2-28A0A075B6P5 120 aa8.36□□□□□ -1.07
VIPAS39-211ENST00000557658 IGKV2D-28P01615 120 aa8.36□□□□□ -1.07
VIPAS39-211ENST00000557658 LINC00158P58513 81 aa8.36□□□□□ -1.07
VIPAS39-211ENST00000557658 CR1P17927 2039 aa8.36□□□□□ -1.07
VIPAS39-211ENST00000557658 MXRA5Q9NR99 2828 aa8.35□□□□□ -1.07
VIPAS39-211ENST00000557658 H0YGX0 51 aa8.35□□□□□ -1.07
VIPAS39-211ENST00000557658 C9orf153Q5TBE3 101 aa8.35□□□□□ -1.07
VIPAS39-211ENST00000557658 FLNCQ14315 2725 aa8.35□□□□□ -1.07
VIPAS39-211ENST00000557658 MYO9AB2RTY4 2548 aa8.35□□□□□ -1.07
VIPAS39-211ENST00000557658 UQCRQO14949 82 aa8.35□□□□□ -1.07
VIPAS39-211ENST00000557658 SMIM11BQ8TCY0 68 aa8.35□□□□□ -1.07
VIPAS39-211ENST00000557658 PKD1L2Q7Z442 2459 aa8.35□□□□□ -1.07
VIPAS39-211ENST00000557658 TRGV2A0A075B6R0 118 aa8.34□□□□□ -1.07
VIPAS39-211ENST00000557658 A0A087WYN8 130 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 IGKV3OR2-268A0A0C4DH90 116 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 CCL18P55774 89 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 C16orf74Q96GX8 76 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 CFAP46Q8IYW2 2715 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 TRBV6-4A0A1B0GX49 114 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 IBA57-AS1B1ANH7 110 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 LINC00526Q96FQ7 95 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 C2CD3Q4AC94 2353 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 WNK1Q9H4A3 2382 aa8.33□□□□□ -1.08
VIPAS39-211ENST00000557658 LOC100131303A0A0U1RQF7 123 aa8.32□□□□□ -1.08
VIPAS39-211ENST00000557658 IGHV3OR16-9A0A0B4J2B5 98 aa8.31□□□□□ -1.08
VIPAS39-211ENST00000557658 TRGV4A0A0C4DH28 118 aa8.31□□□□□ -1.08
VIPAS39-211ENST00000557658 POLQO75417 2590 aa8.31□□□□□ -1.08
VIPAS39-211ENST00000557658 NOTCH3Q9UM47 2321 aa8.31□□□□□ -1.08
VIPAS39-211ENST00000557658 IGLV4-60A0A075B6I1 120 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 A0A1W2PRX2 142 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 PLAC8L1A1L4L8 177 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 CCL24O00175 119 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 COX7CP15954 63 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 CMC4P56277 68 aaPredicted RBP8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 LRRC75A-AS1Q8N1F1 130 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 C14orf132Q9NPU4 83 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 A0A087WZ39 114 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 TRBV6-8A0A0A6YYG3 113 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 ATOX1O00244 68 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 PFN2P35080 140 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 OBSCN-AS1Q96MR7 158 aa8.3□□□□□ -1.08
VIPAS39-211ENST00000557658 UTP20O75691 2785 aaKnown RBP8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 LECT2O14960 151 aa8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 PAX4O43316 350 aa8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 HIST1H4AP62805 103 aaKnown RBP8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 TMEM86BQ8N661 226 aa8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 GIG44P09565 113 aaPredicted RBP8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 C9orf129Q5T035 196 aaKnown RBP8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 C11orf44Q8N8P7 122 aa8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 OR13C6PQ8NH95 151 aa8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 KLK5Q9Y337 293 aaPredicted RBP8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 CHD6Q8TD26 2715 aa8.29□□□□□ -1.08
VIPAS39-211ENST00000557658 ACACBO00763 2458 aa8.28□□□□□ -1.08
VIPAS39-211ENST00000557658 Q6JHZ5 121 aa8.28□□□□□ -1.08
VIPAS39-211ENST00000557658 MYO18BQ8IUG5 2567 aa8.28□□□□□ -1.08
VIPAS39-211ENST00000557658 CSMD2Q7Z408 3487 aa8.27□□□□□ -1.09
VIPAS39-211ENST00000557658 RPL35AP18077 110 aaKnown RBP8.27□□□□□ -1.09
VIPAS39-211ENST00000557658 C2orf48Q96LS8 159 aa8.27□□□□□ -1.09
VIPAS39-211ENST00000557658 TEX15Q9BXT5 2789 aa8.27□□□□□ -1.09
VIPAS39-211ENST00000557658 C6orf226Q5I0X4 101 aa8.26□□□□□ -1.09
VIPAS39-211ENST00000557658 LINC00846Q9NV44 126 aa8.26□□□□□ -1.09
VIPAS39-211ENST00000557658 RPL18AQ02543 176 aaKnown RBP8.26□□□□□ -1.09
VIPAS39-211ENST00000557658 FHL2Q14192 279 aa8.26□□□□□ -1.09
VIPAS39-211ENST00000557658 IGKV3D-7A0A0C4DH55 119 aa8.25□□□□□ -1.09
VIPAS39-211ENST00000557658 LINC00959A0A1B0GUT2 108 aa8.25□□□□□ -1.09
VIPAS39-211ENST00000557658 NCR3O14931 201 aa8.25□□□□□ -1.09
VIPAS39-211ENST00000557658 LY6G6DO95868 133 aa8.25□□□□□ -1.09
VIPAS39-211ENST00000557658 CRYGAP11844 174 aa8.25□□□□□ -1.09
VIPAS39-211ENST00000557658 ORMDL1Q9P0S3 153 aa8.25□□□□□ -1.09
VIPAS39-211ENST00000557658 DEFB113Q30KQ7 82 aa8.25□□□□□ -1.09
VIPAS39-211ENST00000557658 FAM208BQ5VWN6 2430 aa8.25□□□□□ -1.09
VIPAS39-211ENST00000557658 WFDC10AQ9H1F0 79 aa8.24□□□□□ -1.09
VIPAS39-211ENST00000557658 IGSF10Q6WRI0 2623 aa8.24□□□□□ -1.09
VIPAS39-211ENST00000557658 SLPIP03973 132 aa8.24□□□□□ -1.09
VIPAS39-211ENST00000557658 C11orf68Q9H3H3 251 aaKnown RBP8.24□□□□□ -1.09
VIPAS39-211ENST00000557658 TLN2Q9Y4G6 2542 aa8.24□□□□□ -1.09
VIPAS39-211ENST00000557658 AKAP9Q99996 3911 aa8.24□□□□□ -1.09
VIPAS39-211ENST00000557658 DNAJC9-AS1A6NH13 148 aa8.23□□□□□ -1.09
VIPAS39-211ENST00000557658 KRTAP10-9P60411 292 aa8.23□□□□□ -1.09
VIPAS39-211ENST00000557658 CSNK1G2-AS1Q8NCQ2 148 aa8.23□□□□□ -1.09
VIPAS39-211ENST00000557658 FBN2P35556 2912 aa8.23□□□□□ -1.09
VIPAS39-211ENST00000557658 PLA2G2AP14555 144 aa8.23□□□□□ -1.09
VIPAS39-211ENST00000557658 PTPN13Q12923 2485 aa8.23□□□□□ -1.09
VIPAS39-211ENST00000557658 NAV2Q8IVL1 2488 aa8.23□□□□□ -1.09
VIPAS39-211ENST00000557658 CENPEQ02224 2701 aa8.22□□□□□ -1.09
VIPAS39-211ENST00000557658 A0A1B0GX51 115 aa8.22□□□□□ -1.09
VIPAS39-211ENST00000557658 SS18Q15532 418 aa8.22□□□□□ -1.09
VIPAS39-211ENST00000557658 Q8IZM0 81 aa8.22□□□□□ -1.09
VIPAS39-211ENST00000557658 JMJD1CQ15652 2540 aa8.22□□□□□ -1.09
VIPAS39-211ENST00000557658 XCL1P47992 114 aa8.21□□□□□ -1.09
VIPAS39-211ENST00000557658 C19orf73Q9NVV2 129 aa8.21□□□□□ -1.09
VIPAS39-211ENST00000557658 EPG5Q9HCE0 2579 aa8.21□□□□□ -1.09
VIPAS39-211ENST00000557658 CCKP06307 115 aa8.21□□□□□ -1.1
VIPAS39-211ENST00000557658 CACNA1AO00555 2505 aa8.21□□□□□ -1.1
VIPAS39-211ENST00000557658 hADV29S1A0JD25 119 aa8.2□□□□□ -1.1
VIPAS39-211ENST00000557658 IGLV1-51P01701 117 aa8.2□□□□□ -1.1
VIPAS39-211ENST00000557658 SERP2Q8N6R1 65 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms