RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 IGHV3OR16-8A0A075B7F1 116 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 IGHV3-15A0A0B4J1V0 119 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 A8MUU9 505 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 A8MWP4 228 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 PRH1P02810 166 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 S100A4P26447 101 aaKnown RBP0.91□□□□□ -2.26
HIF1A-212ENST00000557538 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP0.91□□□□□ -2.26
HIF1A-212ENST00000557538 Q8NAQ8 132 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 LINC00846Q9NV44 126 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 FAM215AQ9Y5M1 114 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 MYOFQ9NZM1 2061 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 TRBV6-8A0A0A6YYG3 113 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 TRAV12-1A0A0B4J245 112 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 IGHV1-3A0A0C4DH29 117 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 CTXND1A0A1B0GTU2 59 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 TRGV3P03979 118 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 C1orf134Q5TEV5 83 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 RPS27LQ71UM5 84 aaKnown RBP0.91□□□□□ -2.26
HIF1A-212ENST00000557538 ORMDL3Q8N138 153 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 CNEP1R1Q8N9A8 125 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 WFDC6Q9BQY6 131 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 Q9BRP9 147 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 ANKRD17O75179 2603 aaKnown RBP0.91□□□□□ -2.26
HIF1A-212ENST00000557538 RETNLBQ9BQ08 111 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 LIMD2Q9BT23 127 aa0.91□□□□□ -2.26
HIF1A-212ENST00000557538 IGKV1D-37A0A075B6S9 117 aa0.9□□□□□ -2.26
HIF1A-212ENST00000557538 A0A0J9YX75 114 aa0.9□□□□□ -2.26
HIF1A-212ENST00000557538 ARMS2P0C7Q2 107 aa0.9□□□□□ -2.26
HIF1A-212ENST00000557538 MGST1P10620 155 aaKnown RBP0.9□□□□□ -2.26
HIF1A-212ENST00000557538 NUMA1Q14980 2115 aa0.9□□□□□ -2.26
HIF1A-212ENST00000557538 NOTCH1P46531 2555 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 IGHV3-21A0A0B4J1V1 117 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 TRAV10A0A0B4J240 114 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 C17orf98A8MV24 154 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 IGLV3-25P01717 112 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 C20orf166-AS1Q96NR2 134 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 LINC00467Q9BRT7 94 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 TTTY12Q9BZ98 90 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 FGF23Q9GZV9 251 aaPredicted RBP0.9□□□□□ -2.27
HIF1A-212ENST00000557538 CUL9Q8IWT3 2517 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 SMG1Q96Q15 3661 aaKnown RBP0.9□□□□□ -2.27
HIF1A-212ENST00000557538 SNRNP200O75643 2136 aaKnown RBP0.9□□□□□ -2.27
HIF1A-212ENST00000557538 IGKV1OR2-108A0A075B7D4 117 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 IGKV1-17P01599 117 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 CD24P25063 80 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 MIAQ16674 131 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 S100A7L2Q5SY68 101 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 LCE1CQ5T751 118 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 LCE1BQ5T7P3 118 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 TMEM254Q8TBM7 123 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 SPRR4Q96PI1 79 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 SCGB3A1Q96QR1 104 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 LCE3DQ9BYE3 92 aa0.9□□□□□ -2.27
HIF1A-212ENST00000557538 PCNTO95613 3336 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 IGHV3-49A0A0A0MS15 119 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 LINC00959A0A1B0GUT2 108 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 H3BVH4 76 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 HMGN4O00479 90 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 ELOF1P60002 83 aaKnown RBP0.89□□□□□ -2.27
HIF1A-212ENST00000557538 KRTAP21-3Q3LHN1 58 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 PRR9Q5T870 116 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 LYZL1Q6UWQ5 148 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 Q6ZQT0 140 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 LYZL2Q7Z4W2 148 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 NDUFA4L2Q9NRX3 87 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 SNURFQ9Y675 71 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 LINC01558Q9Y6Z2 57 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 ARHGAP32A7KAX9 2087 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 RANBP2P49792 3224 aaKnown RBP0.89□□□□□ -2.27
HIF1A-212ENST00000557538 MACF1Q9UPN3 7388 aaKnown RBP0.89□□□□□ -2.27
HIF1A-212ENST00000557538 TRIOBPQ9H2D6 2365 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 LOC107984156A0A0G2JMH3 177 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 SMIM11AP58511 58 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 ARL17AQ8IVW1 177 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 C9orf163Q8N9P6 203 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 ZNF625Q96I27 306 aaPredicted RBP0.89□□□□□ -2.27
HIF1A-212ENST00000557538 EP400Q96L91 3159 aa0.89□□□□□ -2.27
HIF1A-212ENST00000557538 TET1Q8NFU7 2136 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 TRBV6-1A0A0K0K1D8 114 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 ODF3BA8MYP8 253 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 COX6CP09669 75 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 SAA2P0DJI9 122 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-212ENST00000557538 PLNP26678 52 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 NNATQ16517 81 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 CSAG1Q6PB30 78 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 LINC00322Q6ZN03 302 aaPredicted RBP0.88□□□□□ -2.27
HIF1A-212ENST00000557538 Q6ZS52 159 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 Q86TA4 180 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 ICOSQ9Y6W8 199 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 OTOGQ6ZRI0 2925 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 TRBV6-5A0A0K0K1A5 114 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 FXYD7P58549 80 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 LY6EQ16553 131 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 LUZP6Q538Z0 58 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 LINC01590Q5TEZ4 76 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 FAM74A4Q5TZK3 123 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 MIR7-3HGQ8N6C7 128 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 MDC1Q14676 2089 aaKnown RBP0.88□□□□□ -2.27
HIF1A-212ENST00000557538 CENPFP49454 3210 aa0.88□□□□□ -2.27
HIF1A-212ENST00000557538 NUP214P35658 2090 aaPredicted RBP0.88□□□□□ -2.27
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms