RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 TRBV30A0A0K0K1B3 111 aa5.02□□□□□ -1.61
NEDD1-211ENST00000557454 SPINK1P00995 79 aa5.02□□□□□ -1.61
NEDD1-211ENST00000557454 IGLC6P0CF74 106 aa5.02□□□□□ -1.61
NEDD1-211ENST00000557454 AKR1C3P42330 323 aa5.02□□□□□ -1.61
NEDD1-211ENST00000557454 MZT2BQ6NZ67 158 aa5.02□□□□□ -1.61
NEDD1-211ENST00000557454 FAM19A2Q8N3H0 131 aa5.02□□□□□ -1.61
NEDD1-211ENST00000557454 XAGE1AQ9HD64 81 aa5.02□□□□□ -1.61
NEDD1-211ENST00000557454 TMEM242Q9NWH2 141 aa5.02□□□□□ -1.61
NEDD1-211ENST00000557454 TP73-AS1Q9UF72 201 aa5.02□□□□□ -1.61
NEDD1-211ENST00000557454 GAGE10A6NGK3 116 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 I3L3M4 83 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 SIX6O95475 246 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 PMCHP20382 165 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 PCP4P48539 62 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 PRLHP81277 87 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 TRIQKQ629K1 86 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 C2orf82Q6UX34 121 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 Q8N377 158 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 LINC00167Q96N53 147 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 KRTAP9-3Q9BYQ3 159 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 CYTL1Q9NRR1 136 aa5.01□□□□□ -1.61
NEDD1-211ENST00000557454 INMT-MINDY4F8WBC2 141 aa5□□□□□ -1.61
NEDD1-211ENST00000557454 MT2AP02795 61 aa5□□□□□ -1.61
NEDD1-211ENST00000557454 FOXA3P55318 350 aaPredicted RBP5□□□□□ -1.61
NEDD1-211ENST00000557454 NKX6-2Q9C056 277 aaPredicted RBP5□□□□□ -1.61
NEDD1-211ENST00000557454 C7orf77A4D0Y5 90 aa4.99□□□□□ -1.61
NEDD1-211ENST00000557454 CENPXA8MT69 81 aa4.99□□□□□ -1.61
NEDD1-211ENST00000557454 KIAA0087Q14695 138 aa4.99□□□□□ -1.61
NEDD1-211ENST00000557454 CNPY1Q3B7I2 92 aa4.99□□□□□ -1.61
NEDD1-211ENST00000557454 Q6ZUT4 128 aa4.99□□□□□ -1.61
NEDD1-211ENST00000557454 ACTR3CQ9C0K3 210 aaPredicted RBP4.99□□□□□ -1.61
NEDD1-211ENST00000557454 RNASE7Q9H1E1 156 aaKnown RBP4.99□□□□□ -1.61
NEDD1-211ENST00000557454 IGHV3OR16-9A0A0B4J2B5 98 aa4.98□□□□□ -1.61
NEDD1-211ENST00000557454 ZNF727A8MUV8 499 aa4.98□□□□□ -1.61
NEDD1-211ENST00000557454 UPK1BO75841 260 aa4.98□□□□□ -1.61
NEDD1-211ENST00000557454 ATP6V1G2O95670 118 aa4.98□□□□□ -1.61
NEDD1-211ENST00000557454 ATP6V0CP27449 155 aa4.98□□□□□ -1.61
NEDD1-211ENST00000557454 PNRC1Q12796 327 aaPredicted RBP4.98□□□□□ -1.61
NEDD1-211ENST00000557454 ZNF726P1Q15940 193 aa4.98□□□□□ -1.61
NEDD1-211ENST00000557454 STOML3Q8TAV4 291 aa4.98□□□□□ -1.61
NEDD1-211ENST00000557454 PLEKHB2Q96CS7 222 aa4.98□□□□□ -1.61
NEDD1-211ENST00000557454 KMT2DO14686 5537 aa4.98□□□□□ -1.61
NEDD1-211ENST00000557454 C9orf92A6NGG3 77 aa4.97□□□□□ -1.61
NEDD1-211ENST00000557454 CCDC160A6NGH7 325 aa4.97□□□□□ -1.61
NEDD1-211ENST00000557454 MT1FP04733 61 aa4.97□□□□□ -1.61
NEDD1-211ENST00000557454 Q6Q795 121 aa4.97□□□□□ -1.61
NEDD1-211ENST00000557454 LYZL1Q6UWQ5 148 aa4.97□□□□□ -1.61
NEDD1-211ENST00000557454 BAGE2Q86Y30 109 aa4.97□□□□□ -1.61
NEDD1-211ENST00000557454 NUDT15Q9NV35 164 aa4.97□□□□□ -1.61
NEDD1-211ENST00000557454 SLC25A20O43772 301 aa4.96□□□□□ -1.62
NEDD1-211ENST00000557454 MBP02144 154 aa4.96□□□□□ -1.62
NEDD1-211ENST00000557454 MDN1Q9NU22 5596 aa4.95□□□□□ -1.62
NEDD1-211ENST00000557454 RPL32P62910 135 aaKnown RBP4.95□□□□□ -1.62
NEDD1-211ENST00000557454 CST9LP1Q5W188 147 aa4.95□□□□□ -1.62
NEDD1-211ENST00000557454 PPP1R1CQ8WVI7 109 aa4.95□□□□□ -1.62
NEDD1-211ENST00000557454 TCEAL7Q9BRU2 100 aa4.95□□□□□ -1.62
NEDD1-211ENST00000557454 PSMG3Q9BT73 122 aaPredicted RBP4.95□□□□□ -1.62
NEDD1-211ENST00000557454 CSDC2Q9Y534 153 aaKnown RBP4.95□□□□□ -1.62
NEDD1-211ENST00000557454 IGKV2-28A0A075B6P5 120 aa4.94□□□□□ -1.62
NEDD1-211ENST00000557454 F2Z2F3 143 aa4.94□□□□□ -1.62
NEDD1-211ENST00000557454 IGKV2D-28P01615 120 aa4.94□□□□□ -1.62
NEDD1-211ENST00000557454 RPS20P60866 119 aaKnown RBP4.94□□□□□ -1.62
NEDD1-211ENST00000557454 TWIST1Q15672 202 aa4.94□□□□□ -1.62
NEDD1-211ENST00000557454 KRTAP15-1Q3LI76 137 aa4.94□□□□□ -1.62
NEDD1-211ENST00000557454 FAM19A1Q7Z5A9 133 aa4.94□□□□□ -1.62
NEDD1-211ENST00000557454 TRBV6-5A0A0K0K1A5 114 aa4.93□□□□□ -1.62
NEDD1-211ENST00000557454 CTXND1A0A1B0GTU2 59 aa4.93□□□□□ -1.62
NEDD1-211ENST00000557454 S100A5P33763 92 aa4.93□□□□□ -1.62
NEDD1-211ENST00000557454 RPS29P62273 56 aaKnown RBP4.93□□□□□ -1.62
NEDD1-211ENST00000557454 LCE5AQ5TCM9 118 aa4.93□□□□□ -1.62
NEDD1-211ENST00000557454 SPRR4Q96PI1 79 aa4.93□□□□□ -1.62
NEDD1-211ENST00000557454 CCDC32Q9BV29 185 aa4.93□□□□□ -1.62
NEDD1-211ENST00000557454 TNFSF18Q9UNG2 199 aa4.93□□□□□ -1.62
NEDD1-211ENST00000557454 MPC2O95563 127 aa4.92□□□□□ -1.62
NEDD1-211ENST00000557454 S100A9P06702 114 aaKnown RBP4.92□□□□□ -1.62
NEDD1-211ENST00000557454 FHITP49789 147 aa4.92□□□□□ -1.62
NEDD1-211ENST00000557454 SERF2P84101 59 aa4.92□□□□□ -1.62
NEDD1-211ENST00000557454 CBLN2Q8IUK8 224 aa4.92□□□□□ -1.62
NEDD1-211ENST00000557454 ST20Q9HBF5 79 aa4.92□□□□□ -1.62
NEDD1-211ENST00000557454 RAB19A4D1S5 217 aa4.91□□□□□ -1.62
NEDD1-211ENST00000557454 PLA2G10O15496 165 aa4.91□□□□□ -1.62
NEDD1-211ENST00000557454 LYRM1O43325 122 aa4.91□□□□□ -1.62
NEDD1-211ENST00000557454 SCO1O75880 301 aa4.91□□□□□ -1.62
NEDD1-211ENST00000557454 TEX261Q6UWH6 196 aa4.91□□□□□ -1.62
NEDD1-211ENST00000557454 HIGD2AQ9BW72 106 aa4.91□□□□□ -1.62
NEDD1-211ENST00000557454 TGIF2-C20orf24A0A0A6YYL0 155 aa4.9□□□□□ -1.63
NEDD1-211ENST00000557454 TRBV27A0A0K0K1C4 114 aa4.9□□□□□ -1.63
NEDD1-211ENST00000557454 TMEM238C9JI98 176 aa4.9□□□□□ -1.63
NEDD1-211ENST00000557454 IFNA1P01562 189 aa4.9□□□□□ -1.63
NEDD1-211ENST00000557454 PET100P0DJ07 73 aa4.9□□□□□ -1.63
NEDD1-211ENST00000557454 IL7P13232 177 aa4.9□□□□□ -1.63
NEDD1-211ENST00000557454 H2BFSP57053 126 aa4.9□□□□□ -1.63
NEDD1-211ENST00000557454 SMAGPQ0VAQ4 97 aa4.9□□□□□ -1.63
NEDD1-211ENST00000557454 FAM210AQ96ND0 272 aa4.9□□□□□ -1.63
NEDD1-211ENST00000557454 XKRY2A2RUG3 117 aa4.89□□□□□ -1.63
NEDD1-211ENST00000557454 IFITM10A6NMD0 228 aa4.89□□□□□ -1.63
NEDD1-211ENST00000557454 FCER1GP30273 86 aa4.89□□□□□ -1.63
NEDD1-211ENST00000557454 POLR2KP53803 58 aaKnown RBP4.89□□□□□ -1.63
NEDD1-211ENST00000557454 KRTAP10-10P60014 251 aa4.89□□□□□ -1.63
NEDD1-211ENST00000557454 NKAPP1Q8N9T2 125 aa4.89□□□□□ -1.63
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms