RNA–Protein interactions for RNA: ENST00000557442.5

HNRNPC-232, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

TSL 2

Gene HNRNPC, Length 1,308 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-232ENST00000557442 TIMM17AQ99595 171 aa6.87□□□□□ -1.31
HNRNPC-232ENST00000557442 VCX2Q9H322 139 aa6.87□□□□□ -1.31
HNRNPC-232ENST00000557442 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.86□□□□□ -1.31
HNRNPC-232ENST00000557442 HAMPP81172 84 aa6.86□□□□□ -1.31
HNRNPC-232ENST00000557442 PAPPA-AS1Q5QFB9 102 aa6.86□□□□□ -1.31
HNRNPC-232ENST00000557442 ZC2HC1BQ5TFG8 222 aa6.86□□□□□ -1.31
HNRNPC-232ENST00000557442 LINC00173Q6ZV60 143 aa6.86□□□□□ -1.31
HNRNPC-232ENST00000557442 C5orf38Q86SI9 138 aa6.86□□□□□ -1.31
HNRNPC-232ENST00000557442 SCGB3A1Q96QR1 104 aa6.86□□□□□ -1.31
HNRNPC-232ENST00000557442 RYR1P21817 5038 aa6.86□□□□□ -1.31
HNRNPC-232ENST00000557442 HERC2O95714 4834 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 LINC01549A6NIU2 74 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 LINC00614P0C842 121 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 UBE2D1P51668 147 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 ERASQ7Z444 233 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 C9orf163Q8N9P6 203 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 LINC00526Q96FQ7 95 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 URB1-AS1Q96HZ7 61 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 AMELXQ99217 191 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 FAM30AQ9NZY2 134 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 HSPG2P98160 4391 aa6.85□□□□□ -1.31
HNRNPC-232ENST00000557442 IGHV3OR16-9A0A0B4J2B5 98 aa6.84□□□□□ -1.31
HNRNPC-232ENST00000557442 ZNF561-AS1K7EIQ3 104 aa6.84□□□□□ -1.31
HNRNPC-232ENST00000557442 APOMO95445 188 aa6.84□□□□□ -1.31
HNRNPC-232ENST00000557442 SLPIP03973 132 aa6.84□□□□□ -1.31
HNRNPC-232ENST00000557442 TRGC2P03986 189 aa6.84□□□□□ -1.31
HNRNPC-232ENST00000557442 XGP55808 180 aa6.84□□□□□ -1.31
HNRNPC-232ENST00000557442 RAB5BP61020 215 aa6.84□□□□□ -1.31
HNRNPC-232ENST00000557442 LINC00242Q5T6M2 205 aa6.84□□□□□ -1.31
HNRNPC-232ENST00000557442 Q6ZSA8 131 aa6.84□□□□□ -1.31
HNRNPC-232ENST00000557442 IGHV3-64A0A075B6Q5 118 aa6.83□□□□□ -1.32
HNRNPC-232ENST00000557442 SCO1O75880 301 aa6.83□□□□□ -1.32
HNRNPC-232ENST00000557442 HBDP02042 147 aa6.83□□□□□ -1.32
HNRNPC-232ENST00000557442 PMCHL1Q16048 86 aa6.83□□□□□ -1.32
HNRNPC-232ENST00000557442 IGLV4-69A0A075B6H9 119 aa6.82□□□□□ -1.32
HNRNPC-232ENST00000557442 A0A096LNJ9 63 aa6.82□□□□□ -1.32
HNRNPC-232ENST00000557442 COLCA2A8K830 154 aa6.82□□□□□ -1.32
HNRNPC-232ENST00000557442 COX6A2Q02221 97 aa6.82□□□□□ -1.32
HNRNPC-232ENST00000557442 SPAG11BQ08648 103 aa6.82□□□□□ -1.32
HNRNPC-232ENST00000557442 ORAOV1Q8WV07 137 aa6.82□□□□□ -1.32
HNRNPC-232ENST00000557442 CARD19Q96LW7 228 aa6.82□□□□□ -1.32
HNRNPC-232ENST00000557442 A0A087WZ39 114 aa6.81□□□□□ -1.32
HNRNPC-232ENST00000557442 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP6.81□□□□□ -1.32
HNRNPC-232ENST00000557442 SCXQ7RTU7 201 aa6.81□□□□□ -1.32
HNRNPC-232ENST00000557442 OR10D4PQ8NGN7 298 aa6.81□□□□□ -1.32
HNRNPC-232ENST00000557442 CHCHD1Q96BP2 118 aaKnown RBP6.81□□□□□ -1.32
HNRNPC-232ENST00000557442 HERVK_113P63121 156 aa6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 SEC11AP67812 179 aa6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 SYCNQ0VAF6 134 aa6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 PMVKQ15126 192 aa6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 SDIM1Q6ZPB5 146 aa6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 BAGE3Q86Y29 109 aa6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 Q8N1X5 172 aa6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 CAMK2N2Q96S95 79 aa6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 CHAC1Q9BUX1 264 aa6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 GEMIN7Q9H840 131 aaKnown RBP6.8□□□□□ -1.32
HNRNPC-232ENST00000557442 A0A0J9YXV3 536 aa6.79□□□□□ -1.32
HNRNPC-232ENST00000557442 SMR3BP02814 79 aaPredicted RBP6.79□□□□□ -1.32
HNRNPC-232ENST00000557442 NDUFA6P56556 154 aa6.79□□□□□ -1.32
HNRNPC-232ENST00000557442 FAM19A3Q7Z5A8 133 aa6.79□□□□□ -1.32
HNRNPC-232ENST00000557442 KRTAP17-1Q9BYP8 105 aa6.79□□□□□ -1.32
HNRNPC-232ENST00000557442 CST9LQ9H4G1 147 aa6.79□□□□□ -1.32
HNRNPC-232ENST00000557442 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP6.79□□□□□ -1.32
HNRNPC-232ENST00000557442 HSBP1O75506 76 aa6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 ATP5LO75964 103 aa6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 CHTF8P0CG12 524 aa6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 PDZD11Q5EBL8 140 aa6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 Q6ZRU5 148 aa6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 LINC00469Q8N7U9 141 aa6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 CIRBP-AS1Q8TBR5 109 aa6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 C2orf48Q96LS8 159 aa6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 PACRGQ96M98 296 aaPredicted RBP6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 CDKN2A-AS1Q9UH64 79 aa6.78□□□□□ -1.32
HNRNPC-232ENST00000557442 DNAH8Q96JB1 4490 aa6.77□□□□□ -1.32
HNRNPC-232ENST00000557442 IGKV2-24A0A0C4DH68 120 aa6.77□□□□□ -1.32
HNRNPC-232ENST00000557442 PANO1I0J062 215 aa6.77□□□□□ -1.32
HNRNPC-232ENST00000557442 NDUFA1O15239 70 aa6.77□□□□□ -1.32
HNRNPC-232ENST00000557442 LINC01561Q8N1V8 128 aa6.77□□□□□ -1.32
HNRNPC-232ENST00000557442 PKIGQ9Y2B9 76 aa6.77□□□□□ -1.32
HNRNPC-232ENST00000557442 TINCRA0A1B0GVN0 87 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 EPM2AB3EWF7 344 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 SERF1AO75920 110 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 Q5VSD8 79 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 FAM19A2Q8N3H0 131 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 TOMM7Q9P0U1 55 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 SRRM2Q9UQ35 2752 aaKnown RBP6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 A0A096LNI7 61 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 F8WDY8 70 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 ATP6V1G1O75348 118 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 PRSS2P07478 247 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 LINC00310P59036 64 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 CIRBPQ14011 172 aaKnown RBP6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 LINC00528Q8N1L1 170 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 SPACA4Q8TDM5 124 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 DPH3Q96FX2 82 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 KRTAP4-5Q9BYR2 181 aa6.76□□□□□ -1.33
HNRNPC-232ENST00000557442 IGLV5-45A0A087WSX0 123 aa6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 LOC107984640A0A0U1RRK4 108 aa6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 FAM229AH3BQW9 127 aa6.75□□□□□ -1.33
HNRNPC-232ENST00000557442 IGLC3P0DOY3 106 aa6.75□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 98.9 ms