RNA–Protein interactions for RNA: ENST00000557352.1

VRK1-207, Transcript of vaccinia related kinase 1, humanhuman

TSL 5

Gene VRK1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-207ENST00000557352 NXT2Q9NPJ8 142 aaKnown RBP1.85□□□□□ -2.11
VRK1-207ENST00000557352 TP53TG1Q9Y2A0 90 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 COL7A1Q02388 2944 aa1.85□□□□□ -2.11
VRK1-207ENST00000557352 TRAV12-2A0A075B6T6 113 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 TMSB15BA0A087X1C1 80 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 TRAV4A0A0B4J268 109 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 TRBV27A0A0K0K1C4 114 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 TMEM223A0PJW6 202 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 GRIFINA4D1Z8 144 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 LYRM9A8MSI8 78 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 D6R8Y8 96 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 GNRH2O43555 120 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 IGHV3-53P01767 116 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 CRYGDP07320 174 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 LINC00614P0C842 121 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 SMIM17P0DL12 118 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 MIFP14174 115 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 EVI2AP22794 236 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 S100A2P29034 98 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 CKS2P33552 79 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 CRYBA4P53673 196 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 POLR2KP53803 58 aaKnown RBP1.84□□□□□ -2.11
VRK1-207ENST00000557352 NDUFA6P56556 154 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 SYCNQ0VAF6 134 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 JOSD1Q15040 202 aaPredicted RBP1.84□□□□□ -2.11
VRK1-207ENST00000557352 Q6ZQT7 251 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 NEGR1Q7Z3B1 354 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 SPATA12Q7Z6I5 190 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 BAGE3Q86Y29 109 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 Q8N8P6 123 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 DNAJC30Q96LL9 226 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 CAMK2N2Q96S95 79 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 SMIM2Q9BVW6 85 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 KRTAP4-1Q9BYQ7 146 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 MAP1LC3AQ9H492 121 aa1.84□□□□□ -2.11
VRK1-207ENST00000557352 IGHV1-24A0A0C4DH33 117 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 TRBV6-4A0A1B0GX49 114 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 M0QY20 66 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 HSBP1O75506 76 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 NCR2O95944 276 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 NPYP01303 97 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 HBDP02042 147 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 FABP4P15090 132 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 FCER1GP30273 86 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 RHOHQ15669 191 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 IQCJQ1A5X6 159 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 RRN3P1Q2M238 152 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 PDZD11Q5EBL8 140 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 CFAP126Q5VTH2 177 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 FA2HQ7L5A8 372 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 NIT1Q86X76 327 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 LINC01587Q99440 93 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 TIMM17AQ99595 171 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 TMEM208Q9BTX3 173 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 TMEM70Q9BUB7 260 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 SAMD10Q9BYL1 202 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 C11orf68Q9H3H3 251 aaKnown RBP1.83□□□□□ -2.12
VRK1-207ENST00000557352 NIT2Q9NQR4 276 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 HSPB8Q9UJY1 196 aa1.83□□□□□ -2.12
VRK1-207ENST00000557352 TIMM8BQ9Y5J9 83 aaPredicted RBP1.83□□□□□ -2.12
VRK1-207ENST00000557352 TRAV12-1A0A0B4J245 112 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 C20orf202A1L168 122 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 SDHAF1A6NFY7 115 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 H3BNG1 76 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 NUPR1O60356 82 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 LEPROTL1O95214 131 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 LINC00694P0DN24 101 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 IFI27P40305 119 aaPredicted RBP1.82□□□□□ -2.12
VRK1-207ENST00000557352 S100A12P80511 92 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 PMCHL1Q16048 86 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 TMEM97Q5BJF2 176 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 PYY3Q5JQD4 70 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 LINC01545Q5VT33 79 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 LGALS9CQ6DKI2 356 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 CEMP1Q6PRD7 247 aaPredicted RBP1.82□□□□□ -2.12
VRK1-207ENST00000557352 NTM-AS1Q6ZSK4 140 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 DAZ4Q86SG3 579 aaKnown RBP1.82□□□□□ -2.12
VRK1-207ENST00000557352 Q8NAQ8 132 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 OR10D4PQ8NGN7 298 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 TOMM6Q96B49 74 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 TIMM21Q9BVV7 248 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 WFDC10AQ9H1F0 79 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 GTSF1LQ9H1H1 148 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 ST20Q9HBF5 79 aa1.82□□□□□ -2.12
VRK1-207ENST00000557352 TRBV7-3A0A075B6L6 115 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 TRGV1A0A0A0MS02 117 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 TRAV26-2A0A0B4J265 109 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 MUC21A0A0G2JKD1 596 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 MUC21A0A140T8X8 626 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 IGIPA6NJ69 53 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 SYS1-DBNDD2H3BUS1 97 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 I3L3M4 83 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 TSPAN13O95857 204 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 MGPP08493 103 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 C3orf79P0CE67 100 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 PRB4P10163 310 aaPredicted RBP1.81□□□□□ -2.12
VRK1-207ENST00000557352 FXYD7P58549 80 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 MRPS36P82909 103 aaKnown RBP1.81□□□□□ -2.12
VRK1-207ENST00000557352 SMAGPQ0VAQ4 97 aa1.81□□□□□ -2.12
VRK1-207ENST00000557352 ZNF56Q15929 161 aa1.81□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms