RNA–Protein interactions for RNA: ENST00000557280.5

SEC23A-213, Transcript of Sec23 homolog A, coat complex II component, humanhuman

TSL 4 BASIC

Gene SEC23A, Length 561 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC23A-213ENST00000557280 GVQW2A0A096LPI5 108 aaPredicted RBP13.59□□□□□ -0.23
SEC23A-213ENST00000557280 IGHV3OR16-9A0A0B4J2B5 98 aa13.59□□□□□ -0.23
SEC23A-213ENST00000557280 COX7A2LO14548 114 aa13.59□□□□□ -0.23
SEC23A-213ENST00000557280 PDZD11Q5EBL8 140 aa13.59□□□□□ -0.23
SEC23A-213ENST00000557280 CHCHD1Q96BP2 118 aaKnown RBP13.59□□□□□ -0.23
SEC23A-213ENST00000557280 APOBP04114 4563 aaKnown RBP13.59□□□□□ -0.23
SEC23A-213ENST00000557280 LINC00526Q96FQ7 95 aa13.58□□□□□ -0.24
SEC23A-213ENST00000557280 IGHV1-58A0A0C4DH39 117 aa13.57□□□□□ -0.24
SEC23A-213ENST00000557280 LINC01549A6NIU2 74 aa13.57□□□□□ -0.24
SEC23A-213ENST00000557280 SERF1AO75920 110 aa13.57□□□□□ -0.24
SEC23A-213ENST00000557280 CFAP161Q6P656 301 aa13.57□□□□□ -0.24
SEC23A-213ENST00000557280 MALP21145 153 aa13.56□□□□□ -0.24
SEC23A-213ENST00000557280 PAPPA-AS1Q5QFB9 102 aa13.56□□□□□ -0.24
SEC23A-213ENST00000557280 RYR1P21817 5038 aa13.56□□□□□ -0.24
SEC23A-213ENST00000557280 NUPR1O60356 82 aa13.55□□□□□ -0.24
SEC23A-213ENST00000557280 CNBPP62633 177 aaKnown RBP13.55□□□□□ -0.24
SEC23A-213ENST00000557280 FAM19A2Q8N3H0 131 aa13.55□□□□□ -0.24
SEC23A-213ENST00000557280 CST9LQ9H4G1 147 aa13.55□□□□□ -0.24
SEC23A-213ENST00000557280 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST1H2BKO60814 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST1H2BJP06899 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST1H2BOP23527 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST1H2BBP33778 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST1H2BDP58876 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST1H2BCP62807 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST2H2BEQ16778 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST2H2BFQ5QNW6 126 aaPredicted RBP13.54□□□□□ -0.24
SEC23A-213ENST00000557280 FAM19A3Q7Z5A8 133 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST1H2BHQ93079 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST1H2BNQ99877 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 HIST1H2BMQ99879 126 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 DNAH8Q96JB1 4490 aa13.54□□□□□ -0.24
SEC23A-213ENST00000557280 A0A0J9YXV3 536 aa13.53□□□□□ -0.24
SEC23A-213ENST00000557280 HSBP1O75506 76 aa13.53□□□□□ -0.24
SEC23A-213ENST00000557280 FAM30AQ9NZY2 134 aa13.53□□□□□ -0.24
SEC23A-213ENST00000557280 PMVKQ15126 192 aa13.52□□□□□ -0.25
SEC23A-213ENST00000557280 A0A087WZ39 114 aa13.51□□□□□ -0.25
SEC23A-213ENST00000557280 HAMPP81172 84 aa13.51□□□□□ -0.25
SEC23A-213ENST00000557280 HSPG2P98160 4391 aa13.5□□□□□ -0.25
SEC23A-213ENST00000557280 IGHV3-64A0A075B6Q5 118 aa13.5□□□□□ -0.25
SEC23A-213ENST00000557280 C9orf163Q8N9P6 203 aa13.5□□□□□ -0.25
SEC23A-213ENST00000557280 ORAOV1Q8WV07 137 aa13.5□□□□□ -0.25
SEC23A-213ENST00000557280 IGLV4-69A0A075B6H9 119 aa13.49□□□□□ -0.25
SEC23A-213ENST00000557280 ATP5LO75964 103 aa13.49□□□□□ -0.25
SEC23A-213ENST00000557280 NDUFA6P56556 154 aa13.49□□□□□ -0.25
SEC23A-213ENST00000557280 SPAG11BQ08648 103 aa13.49□□□□□ -0.25
SEC23A-213ENST00000557280 HERC2O95714 4834 aa13.49□□□□□ -0.25
SEC23A-213ENST00000557280 ZNF561-AS1K7EIQ3 104 aa13.48□□□□□ -0.25
SEC23A-213ENST00000557280 CDK2AP2O75956 126 aa13.48□□□□□ -0.25
SEC23A-213ENST00000557280 HERVK_113P63121 156 aa13.48□□□□□ -0.25
SEC23A-213ENST00000557280 CDKN2A-AS1Q9UH64 79 aa13.48□□□□□ -0.25
SEC23A-213ENST00000557280 APOMO95445 188 aa13.47□□□□□ -0.25
SEC23A-213ENST00000557280 XGP55808 180 aa13.47□□□□□ -0.25
SEC23A-213ENST00000557280 Q6ZSA8 131 aa13.47□□□□□ -0.25
SEC23A-213ENST00000557280 GEMIN7Q9H840 131 aaKnown RBP13.47□□□□□ -0.25
SEC23A-213ENST00000557280 TINCRA0A1B0GVN0 87 aa13.46□□□□□ -0.25
SEC23A-213ENST00000557280 OR10D4PQ8NGN7 298 aa13.46□□□□□ -0.25
SEC23A-213ENST00000557280 TRAV16A0A0A6YYK6 109 aaPredicted RBP13.45□□□□□ -0.26
SEC23A-213ENST00000557280 SEC11AP67812 179 aa13.45□□□□□ -0.26
SEC23A-213ENST00000557280 LINC00469Q8N7U9 141 aa13.45□□□□□ -0.26
SEC23A-213ENST00000557280 IFI27L1Q96BM0 104 aa13.45□□□□□ -0.26
SEC23A-213ENST00000557280 CARD19Q96LW7 228 aa13.45□□□□□ -0.26
SEC23A-213ENST00000557280 KRTAP17-1Q9BYP8 105 aa13.45□□□□□ -0.26
SEC23A-213ENST00000557280 IGLV5-45A0A087WSX0 123 aa13.44□□□□□ -0.26
SEC23A-213ENST00000557280 IGLC3P0DOY3 106 aa13.44□□□□□ -0.26
SEC23A-213ENST00000557280 SDIM1Q6ZPB5 146 aa13.44□□□□□ -0.26
SEC23A-213ENST00000557280 Q6ZRU5 148 aa13.44□□□□□ -0.26
SEC23A-213ENST00000557280 PANO1I0J062 215 aa13.43□□□□□ -0.26
SEC23A-213ENST00000557280 SYCNQ0VAF6 134 aa13.43□□□□□ -0.26
SEC23A-213ENST00000557280 KIAA0087Q14695 138 aa13.43□□□□□ -0.26
SEC23A-213ENST00000557280 LINC01561Q8N1V8 128 aa13.43□□□□□ -0.26
SEC23A-213ENST00000557280 CHAC1Q9BUX1 264 aa13.43□□□□□ -0.26
SEC23A-213ENST00000557280 C2orf48Q96LS8 159 aa13.42□□□□□ -0.26
SEC23A-213ENST00000557280 CAMK2N2Q96S95 79 aa13.42□□□□□ -0.26
SEC23A-213ENST00000557280 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP13.42□□□□□ -0.26
SEC23A-213ENST00000557280 LEPROTL1O95214 131 aa13.41□□□□□ -0.26
SEC23A-213ENST00000557280 C11orf86A6NJI1 115 aa13.4□□□□□ -0.26
SEC23A-213ENST00000557280 SMIM1B2RUZ4 78 aa13.4□□□□□ -0.26
SEC23A-213ENST00000557280 CHTF8P0CG12 524 aa13.4□□□□□ -0.26
SEC23A-213ENST00000557280 FABP4P15090 132 aa13.4□□□□□ -0.26
SEC23A-213ENST00000557280 C10orf25Q5T742 122 aa13.4□□□□□ -0.26
SEC23A-213ENST00000557280 SPINK8P0C7L1 97 aa13.39□□□□□ -0.27
SEC23A-213ENST00000557280 ZNF22P17026 224 aaPredicted RBP13.39□□□□□ -0.27
SEC23A-213ENST00000557280 CHTOPQ9Y3Y2 248 aaKnown RBP13.39□□□□□ -0.27
SEC23A-213ENST00000557280 TRAV12-1A0A0B4J245 112 aa13.38□□□□□ -0.27
SEC23A-213ENST00000557280 H0Y8G0 127 aa13.38□□□□□ -0.27
SEC23A-213ENST00000557280 C2orf82Q6UX34 121 aa13.38□□□□□ -0.27
SEC23A-213ENST00000557280 UNQ6190/PRO20217Q6UXQ8 127 aa13.38□□□□□ -0.27
SEC23A-213ENST00000557280 SCXQ7RTU7 201 aa13.38□□□□□ -0.27
SEC23A-213ENST00000557280 PACRGQ96M98 296 aaPredicted RBP13.38□□□□□ -0.27
SEC23A-213ENST00000557280 TOMM7Q9P0U1 55 aa13.38□□□□□ -0.27
SEC23A-213ENST00000557280 COA6Q5JTJ3 125 aaKnown RBP13.36□□□□□ -0.27
SEC23A-213ENST00000557280 MRPL35Q9NZE8 188 aaKnown RBP13.36□□□□□ -0.27
SEC23A-213ENST00000557280 HSPB8Q9UJY1 196 aa13.36□□□□□ -0.27
SEC23A-213ENST00000557280 A0A096LNI7 61 aa13.35□□□□□ -0.27
SEC23A-213ENST00000557280 NDUFA1O15239 70 aa13.35□□□□□ -0.27
SEC23A-213ENST00000557280 ODF1Q14990 250 aa13.35□□□□□ -0.27
SEC23A-213ENST00000557280 Q8IZM0 81 aa13.35□□□□□ -0.27
SEC23A-213ENST00000557280 C6orf48Q9UBA6 75 aa13.35□□□□□ -0.27
SEC23A-213ENST00000557280 F8VRH5 84 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms