RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 BVES-AS1Q5T3Y7 98 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 PCP2Q8IVA1 136 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 DEFB104AQ8WTQ1 72 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 RNF183Q96D59 192 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 TMEM101Q96IK0 257 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 AMELXQ99217 191 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 OPRPNQ99935 248 aaPredicted RBP3.13□□□□□ -1.91
SRP54-212ENST00000556992 CHCHD7Q9BUK0 85 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 Q9UF83 564 aa3.13□□□□□ -1.91
SRP54-212ENST00000556992 HYDINQ4G0P3 5121 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 IGLV4-69A0A075B6H9 119 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 IGKV2D-26A0A0A0MRZ7 120 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 IGHV3-38A0A0C4DH36 116 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 TEX48A0A1B0GUV7 120 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 A0A1B0GV90 55 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 TINCRA0A1B0GVN0 87 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 A6NDN8 102 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 IGHV4-30-4P0DP06 118 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 EGFEM1PQ0D2K5 195 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 TMEM170BQ5T4T1 132 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 AMMECR1LQ6DCA0 310 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 C2orf91Q6ZV80 131 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 MAPKAPK5-AS1Q8N8E1 139 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 ORAOV1Q8WV07 137 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 PHLDA1Q8WV24 401 aaPredicted RBP3.12□□□□□ -1.91
SRP54-212ENST00000556992 PLEKHB2Q96CS7 222 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 TMEM243Q9BU79 118 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 GEMIN7Q9H840 131 aaKnown RBP3.12□□□□□ -1.91
SRP54-212ENST00000556992 PRO0255Q9UI72 69 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 UBE2D4Q9Y2X8 147 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 RYR2Q92736 4967 aa3.12□□□□□ -1.91
SRP54-212ENST00000556992 TRBV25-1A0A075B6N4 114 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.11□□□□□ -1.91
SRP54-212ENST00000556992 TRBV6-8A0A0A6YYG3 113 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 IGHV4-28A0A0C4DH34 117 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 A0A0J9YXV3 536 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 TMEM223A0PJW6 202 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 IGKV2-29A2NJV5 120 aaPredicted RBP3.11□□□□□ -1.91
SRP54-212ENST00000556992 H3BRM9 83 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 J3QQQ9 107 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 UBE2L6O14933 153 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 LEPROTO15243 131 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 ATP5G1P05496 136 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 SMIM13P0DJ93 91 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 ZNF25P17030 456 aaPredicted RBP3.11□□□□□ -1.91
SRP54-212ENST00000556992 LGALS3P17931 250 aaKnown RBP3.11□□□□□ -1.91
SRP54-212ENST00000556992 TCTAP57738 103 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 DAD1P61803 113 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 DEFB135Q30KP9 77 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 FAM222AQ5U5X8 452 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 CEMP1Q6PRD7 247 aaPredicted RBP3.11□□□□□ -1.91
SRP54-212ENST00000556992 NTM-AS1Q6ZSK4 140 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 SH2D6Q7Z4S9 175 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 OR5A1Q8NGJ0 315 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 ATP6V0E2Q8NHE4 81 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 HIST1H4GQ99525 98 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 CHAC1Q9BUX1 264 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 TENM3Q9P273 2699 aa3.11□□□□□ -1.91
SRP54-212ENST00000556992 DYNC2H1Q8NCM8 4307 aaKnown RBP3.11□□□□□ -1.91
SRP54-212ENST00000556992 SACSQ9NZJ4 4579 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 ZNF815PA8K554 130 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 ZNF22P17026 224 aaPredicted RBP3.1□□□□□ -1.91
SRP54-212ENST00000556992 UBE2D1P51668 147 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 HERVK_113P63121 156 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 SRSF9Q13242 221 aaKnown RBP eCLIP3.1□□□□□ -1.91
SRP54-212ENST00000556992 SCGB1D4Q6XE38 83 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 FAM19A3Q7Z5A8 133 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 SBSPONQ8IVN8 264 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 CEND1Q8N111 149 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 FAM104AQ969W3 186 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 CHCHD5Q9BSY4 110 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 CDC42SE2Q9NRR3 84 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 DNAH1Q9P2D7 4330 aa3.1□□□□□ -1.91
SRP54-212ENST00000556992 TRAV26-1A0A087WT03 109 aa3.09□□□□□ -1.91
SRP54-212ENST00000556992 IGHV1-58A0A0C4DH39 117 aa3.09□□□□□ -1.91
SRP54-212ENST00000556992 CCL25O15444 150 aa3.09□□□□□ -1.91
SRP54-212ENST00000556992 LINC00694P0DN24 101 aa3.09□□□□□ -1.91
SRP54-212ENST00000556992 MRPL23Q16540 153 aaKnown RBP3.09□□□□□ -1.91
SRP54-212ENST00000556992 LINC00469Q8N7U9 141 aa3.09□□□□□ -1.91
SRP54-212ENST00000556992 Q8NAQ8 132 aa3.09□□□□□ -1.91
SRP54-212ENST00000556992 VSIG2Q96IQ7 327 aa3.09□□□□□ -1.91
SRP54-212ENST00000556992 TTTY13Q9BZ97 58 aa3.09□□□□□ -1.91
SRP54-212ENST00000556992 IGLV5-45A0A087WSX0 123 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 TRAV13-1A0A0B4J241 112 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 LOC100131303A0A0U1RQF7 123 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 A0A1B0GVY2 172 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 TMEM262E9PQX1 116 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 F5H768 121 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 H3BNG1 76 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 TAX1BP3O14907 124 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 DEFB4AO15263 64 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 IGHV3-30-3P0DP02 117 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 GAGE6Q13070 117 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 CIRBPQ14011 172 aaKnown RBP3.08□□□□□ -1.92
SRP54-212ENST00000556992 VAMP3Q15836 100 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 LINC00242Q5T6M2 205 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 Q6ZUT4 128 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 Q6ZVH6 145 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 SMIM29Q86T20 159 aa3.08□□□□□ -1.92
SRP54-212ENST00000556992 SPANXB1Q9NS25 103 aaPredicted RBP3.08□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 215.9 ms