RNA–Protein interactions for RNA: ENST00000556886.1

LINC00871-204, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 866 nt, Biotype lincRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-204ENST00000556886 RNASE8Q8TDE3 154 aaKnown RBP4.59□□□□□ -1.67
LINC00871-204ENST00000556886 PLEKHB2Q96CS7 222 aa4.59□□□□□ -1.67
LINC00871-204ENST00000556886 C16orf74Q96GX8 76 aa4.59□□□□□ -1.67
LINC00871-204ENST00000556886 NSD1Q96L73 2696 aaPredicted RBP4.59□□□□□ -1.67
LINC00871-204ENST00000556886 PRADC1Q9BSG0 188 aa4.59□□□□□ -1.67
LINC00871-204ENST00000556886 SPANXB1Q9NS25 103 aaPredicted RBP4.59□□□□□ -1.67
LINC00871-204ENST00000556886 TP73-AS1Q9UF72 201 aa4.59□□□□□ -1.67
LINC00871-204ENST00000556886 C2CD3Q4AC94 2353 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 A0A1B0GWB2 263 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 K7EP13 123 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 LEPROTO15243 131 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 CCL25O15444 150 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 HTN1P15515 57 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 AZU1P20160 251 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 DAZ4Q86SG3 579 aaKnown RBP4.58□□□□□ -1.68
LINC00871-204ENST00000556886 OR4C5Q8NGB2 326 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 OR5A1Q8NGJ0 315 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 DAZ3Q9NR90 486 aaKnown RBP4.58□□□□□ -1.68
LINC00871-204ENST00000556886 XCL2Q9UBD3 114 aa4.58□□□□□ -1.68
LINC00871-204ENST00000556886 CSDC2Q9Y534 153 aaKnown RBP4.58□□□□□ -1.68
LINC00871-204ENST00000556886 TMEM223A0PJW6 202 aa4.57□□□□□ -1.68
LINC00871-204ENST00000556886 ZNF815PA8K554 130 aa4.57□□□□□ -1.68
LINC00871-204ENST00000556886 TMEM170BQ5T4T1 132 aa4.57□□□□□ -1.68
LINC00871-204ENST00000556886 C9orf66Q5T8R8 295 aa4.57□□□□□ -1.68
LINC00871-204ENST00000556886 AMMECR1LQ6DCA0 310 aa4.57□□□□□ -1.68
LINC00871-204ENST00000556886 HIST1H4GQ99525 98 aa4.57□□□□□ -1.68
LINC00871-204ENST00000556886 CHCHD7Q9BUK0 85 aa4.57□□□□□ -1.68
LINC00871-204ENST00000556886 KRTAP4-4Q9BYR3 166 aa4.57□□□□□ -1.68
LINC00871-204ENST00000556886 MRPL16Q9NX20 251 aaKnown RBP4.57□□□□□ -1.68
LINC00871-204ENST00000556886 TRGV1A0A0A0MS02 117 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 TINCRA0A1B0GVN0 87 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 TRBV6-4A0A1B0GX49 114 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 A0A1W2PPM0 123 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 SMIM9A6NGZ8 99 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 J3QQQ9 107 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 GIG44P09565 113 aaPredicted RBP4.56□□□□□ -1.68
LINC00871-204ENST00000556886 FABP2P12104 132 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 LGALS3P17931 250 aaKnown RBP4.56□□□□□ -1.68
LINC00871-204ENST00000556886 FXYD2P54710 66 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 RRN3P1Q2M238 152 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 HIGD2BQ4VC39 106 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 FAM19A3Q7Z5A8 133 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 SLC25A29Q8N8R3 303 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 CSNK1G2-AS1Q8NCQ2 148 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 ZNRF2Q8NHG8 242 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 KIR2DL5BQ8NHK3 375 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 TTTY13Q9BZ97 58 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 GTSF1LQ9H1H1 148 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 UBE2D4Q9Y2X8 147 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 SORL1Q92673 2214 aa4.56□□□□□ -1.68
LINC00871-204ENST00000556886 ZFHX3Q15911 3703 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 IGHV3-73A0A0B4J1V6 119 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 A0A0J9YY99 117 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 RPL37AP8A6NKH3 93 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 H3BUT2 72 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 K7EP34 96 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 ZNF22P17026 224 aaPredicted RBP4.55□□□□□ -1.68
LINC00871-204ENST00000556886 TCTAP57738 103 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 UBE2D3P61077 147 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 UBE2D2P62837 147 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 C12orf74Q32Q52 190 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 REG3GQ6UW15 175 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 SCGB1D4Q6XE38 83 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 Q6ZVH6 145 aa4.55□□□□□ -1.68
LINC00871-204ENST00000556886 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.55□□□□□ -1.68
LINC00871-204ENST00000556886 NIPBLQ6KC79 2804 aaeCLIP4.54□□□□□ -1.68
LINC00871-204ENST00000556886 NACAE9PAV3 2078 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 MXRA5Q9NR99 2828 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 IGHV1-58A0A0C4DH39 117 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 A0A0J9YXV3 536 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 PLAC8L1A1L4L8 177 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 IGLL5B9A064 214 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 UBE2D1P51668 147 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 LYRM7Q5U5X0 104 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 LINC00612Q8N6U2 182 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 FAM104AQ969W3 186 aa4.54□□□□□ -1.68
LINC00871-204ENST00000556886 NHP2Q9NX24 153 aaKnown RBP4.54□□□□□ -1.68
LINC00871-204ENST00000556886 IGHV3OR16-12A0A075B7B8 117 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 TMEM238C9JI98 176 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 TIMM17BO60830 172 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 PRM2P04554 102 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 KRTAP10-3P60369 221 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 HERVK_113P63121 156 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 Q6ZTI0 123 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 SBSPONQ8IVN8 264 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 RAB37Q96AX2 223 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 NOP10Q9NPE3 64 aaKnown RBP4.53□□□□□ -1.68
LINC00871-204ENST00000556886 SPCS1Q9Y6A9 102 aa4.53□□□□□ -1.68
LINC00871-204ENST00000556886 ATRQ13535 2644 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 TRGV2A0A075B6R0 118 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 TRAV16A0A0A6YYK6 109 aaPredicted RBP4.52□□□□□ -1.69
LINC00871-204ENST00000556886 A0A0J9YXY3 114 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 IGHV3-30P01768 117 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 IGHV3-30-3P0DP02 117 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 IGHV3-30-5P0DP03 117 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 WFDC9Q8NEX5 89 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 VSIG2Q96IQ7 327 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 CITED1Q99966 193 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 PPDPFQ9H3Y8 114 aa4.52□□□□□ -1.69
LINC00871-204ENST00000556886 GEMIN7Q9H840 131 aaKnown RBP4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 118.4 ms