RNA–Protein interactions for RNA: ENST00000556864.5

PSEN1-218, Transcript of presenilin 1, humanhuman

TSL 5

Gene PSEN1, Length 574 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-218ENST00000556864 IGLV2-33A0A075B6J2 118 aaPredicted RBP11.51□□□□□ -0.57
PSEN1-218ENST00000556864 C16orf90A8MZG2 172 aa11.51□□□□□ -0.57
PSEN1-218ENST00000556864 APOMO95445 188 aa11.51□□□□□ -0.57
PSEN1-218ENST00000556864 KRTAP10-2P60368 255 aa11.51□□□□□ -0.57
PSEN1-218ENST00000556864 PMVKQ15126 192 aa11.51□□□□□ -0.57
PSEN1-218ENST00000556864 DNAH11Q96DT5 4516 aa11.5□□□□□ -0.57
PSEN1-218ENST00000556864 hDV102S1A0JD36 115 aa11.5□□□□□ -0.57
PSEN1-218ENST00000556864 LINC00310P59036 64 aa11.5□□□□□ -0.57
PSEN1-218ENST00000556864 LINC00242Q5T6M2 205 aa11.5□□□□□ -0.57
PSEN1-218ENST00000556864 ZC2HC1BQ5TFG8 222 aa11.5□□□□□ -0.57
PSEN1-218ENST00000556864 C15orf56Q8N910 161 aa11.5□□□□□ -0.57
PSEN1-218ENST00000556864 GVQW2A0A096LPI5 108 aaPredicted RBP11.49□□□□□ -0.57
PSEN1-218ENST00000556864 HERVK_113P63121 156 aa11.49□□□□□ -0.57
PSEN1-218ENST00000556864 FAM19A3Q7Z5A8 133 aa11.49□□□□□ -0.57
PSEN1-218ENST00000556864 GEMIN7Q9H840 131 aaKnown RBP11.49□□□□□ -0.57
PSEN1-218ENST00000556864 PKD1P98161 4303 aa11.49□□□□□ -0.57
PSEN1-218ENST00000556864 NDUFA6P56556 154 aa11.48□□□□□ -0.57
PSEN1-218ENST00000556864 C5orf38Q86SI9 138 aa11.48□□□□□ -0.57
PSEN1-218ENST00000556864 FAM19A2Q8N3H0 131 aa11.48□□□□□ -0.57
PSEN1-218ENST00000556864 CST9LQ9H4G1 147 aa11.48□□□□□ -0.57
PSEN1-218ENST00000556864 IGHV3OR16-9A0A0B4J2B5 98 aa11.47□□□□□ -0.57
PSEN1-218ENST00000556864 LEPROTL1O95214 131 aa11.47□□□□□ -0.57
PSEN1-218ENST00000556864 PRSS1P07477 247 aa11.47□□□□□ -0.57
PSEN1-218ENST00000556864 HIGD2BQ4VC39 106 aa11.47□□□□□ -0.57
PSEN1-218ENST00000556864 IFI27L1Q96BM0 104 aa11.47□□□□□ -0.57
PSEN1-218ENST00000556864 HSPB8Q9UJY1 196 aa11.47□□□□□ -0.57
PSEN1-218ENST00000556864 BIRC6Q9NR09 4857 aa11.46□□□□□ -0.57
PSEN1-218ENST00000556864 A0A0J9YXV3 536 aa11.46□□□□□ -0.57
PSEN1-218ENST00000556864 A0A087WZ39 114 aa11.45□□□□□ -0.58
PSEN1-218ENST00000556864 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.45□□□□□ -0.58
PSEN1-218ENST00000556864 TINCRA0A1B0GVN0 87 aa11.45□□□□□ -0.58
PSEN1-218ENST00000556864 LINC01561Q8N1V8 128 aa11.45□□□□□ -0.58
PSEN1-218ENST00000556864 OR10D4PQ8NGN7 298 aa11.45□□□□□ -0.58
PSEN1-218ENST00000556864 ZNF561-AS1K7EIQ3 104 aa11.44□□□□□ -0.58
PSEN1-218ENST00000556864 GCSHP23434 173 aa11.44□□□□□ -0.58
PSEN1-218ENST00000556864 CNBPP62633 177 aaKnown RBP11.44□□□□□ -0.58
PSEN1-218ENST00000556864 COA6Q5JTJ3 125 aaKnown RBP11.44□□□□□ -0.58
PSEN1-218ENST00000556864 LINC00469Q8N7U9 141 aa11.44□□□□□ -0.58
PSEN1-218ENST00000556864 PACRGQ96M98 296 aaPredicted RBP11.44□□□□□ -0.58
PSEN1-218ENST00000556864 DYNC1H1Q14204 4646 aaKnown RBP11.44□□□□□ -0.58
PSEN1-218ENST00000556864 IGHV3-64A0A075B6Q5 118 aa11.43□□□□□ -0.58
PSEN1-218ENST00000556864 TRAV12-1A0A0B4J245 112 aa11.43□□□□□ -0.58
PSEN1-218ENST00000556864 COX6A2Q02221 97 aa11.43□□□□□ -0.58
PSEN1-218ENST00000556864 SPAG11BQ08648 103 aa11.43□□□□□ -0.58
PSEN1-218ENST00000556864 ORAOV1Q8WV07 137 aa11.43□□□□□ -0.58
PSEN1-218ENST00000556864 CHAC1Q9BUX1 264 aa11.43□□□□□ -0.58
PSEN1-218ENST00000556864 NUPR1O60356 82 aa11.42□□□□□ -0.58
PSEN1-218ENST00000556864 IGLC3P0DOY3 106 aa11.42□□□□□ -0.58
PSEN1-218ENST00000556864 FUSP35637 526 aaKnown RBP eCLIP11.42□□□□□ -0.58
PSEN1-218ENST00000556864 IGLV5-45A0A087WSX0 123 aa11.41□□□□□ -0.58
PSEN1-218ENST00000556864 H3BRM9 83 aa11.41□□□□□ -0.58
PSEN1-218ENST00000556864 FABP4P15090 132 aa11.4□□□□□ -0.58
PSEN1-218ENST00000556864 CDKN2A-AS1Q9UH64 79 aa11.4□□□□□ -0.58
PSEN1-218ENST00000556864 PKIGQ9Y2B9 76 aa11.4□□□□□ -0.58
PSEN1-218ENST00000556864 CHTOPQ9Y3Y2 248 aaKnown RBP11.4□□□□□ -0.58
PSEN1-218ENST00000556864 IGLV4-69A0A075B6H9 119 aa11.39□□□□□ -0.59
PSEN1-218ENST00000556864 F8WDY8 70 aa11.39□□□□□ -0.59
PSEN1-218ENST00000556864 C2orf48Q96LS8 159 aa11.39□□□□□ -0.59
PSEN1-218ENST00000556864 CARD19Q96LW7 228 aa11.39□□□□□ -0.59
PSEN1-218ENST00000556864 F8VRH5 84 aa11.38□□□□□ -0.59
PSEN1-218ENST00000556864 H0Y8G0 127 aa11.38□□□□□ -0.59
PSEN1-218ENST00000556864 CAMK2N2Q96S95 79 aa11.38□□□□□ -0.59
PSEN1-218ENST00000556864 MAP1LC3CQ9BXW4 147 aa11.38□□□□□ -0.59
PSEN1-218ENST00000556864 PRSS2P07478 247 aa11.37□□□□□ -0.59
PSEN1-218ENST00000556864 SYCNQ0VAF6 134 aa11.37□□□□□ -0.59
PSEN1-218ENST00000556864 C9orf163Q8N9P6 203 aa11.37□□□□□ -0.59
PSEN1-218ENST00000556864 PKHD1P08F94 4074 aa11.37□□□□□ -0.59
PSEN1-218ENST00000556864 DNAH5Q8TE73 4624 aa11.36□□□□□ -0.59
PSEN1-218ENST00000556864 C11orf86A6NJI1 115 aa11.35□□□□□ -0.59
PSEN1-218ENST00000556864 SMIM1B2RUZ4 78 aa11.35□□□□□ -0.59
PSEN1-218ENST00000556864 NDUFA1O15239 70 aa11.35□□□□□ -0.59
PSEN1-218ENST00000556864 S100A6P06703 90 aa11.35□□□□□ -0.59
PSEN1-218ENST00000556864 ZNF22P17026 224 aaPredicted RBP11.35□□□□□ -0.59
PSEN1-218ENST00000556864 KRTAP10-1P60331 282 aa11.35□□□□□ -0.59
PSEN1-218ENST00000556864 LINC00526Q96FQ7 95 aa11.35□□□□□ -0.59
PSEN1-218ENST00000556864 MRPL35Q9NZE8 188 aaKnown RBP11.35□□□□□ -0.59
PSEN1-218ENST00000556864 SLPIP03973 132 aa11.34□□□□□ -0.59
PSEN1-218ENST00000556864 PLNP26678 52 aa11.34□□□□□ -0.59
PSEN1-218ENST00000556864 ODF1Q14990 250 aa11.34□□□□□ -0.59
PSEN1-218ENST00000556864 TMEM170BQ5T4T1 132 aa11.34□□□□□ -0.59
PSEN1-218ENST00000556864 Q8IZM0 81 aa11.34□□□□□ -0.59
PSEN1-218ENST00000556864 TOMM7Q9P0U1 55 aa11.34□□□□□ -0.59
PSEN1-218ENST00000556864 SPINK8P0C7L1 97 aa11.33□□□□□ -0.6
PSEN1-218ENST00000556864 CXCL5P42830 114 aa11.33□□□□□ -0.6
PSEN1-218ENST00000556864 LINC01620Q4KN68 170 aa11.33□□□□□ -0.6
PSEN1-218ENST00000556864 Q6ZRU5 148 aa11.32□□□□□ -0.6
PSEN1-218ENST00000556864 CDK2AP2O75956 126 aa11.31□□□□□ -0.6
PSEN1-218ENST00000556864 CKS1BP61024 79 aa11.31□□□□□ -0.6
PSEN1-218ENST00000556864 KIAA0087Q14695 138 aa11.31□□□□□ -0.6
PSEN1-218ENST00000556864 C6orf226Q5I0X4 101 aa11.31□□□□□ -0.6
PSEN1-218ENST00000556864 SYS1-DBNDD2H3BUS1 97 aa11.3□□□□□ -0.6
PSEN1-218ENST00000556864 DPM2O94777 84 aa11.3□□□□□ -0.6
PSEN1-218ENST00000556864 S100A2P29034 98 aa11.3□□□□□ -0.6
PSEN1-218ENST00000556864 RNF151Q2KHN1 245 aa11.3□□□□□ -0.6
PSEN1-218ENST00000556864 COX7B2Q8TF08 81 aa11.3□□□□□ -0.6
PSEN1-218ENST00000556864 LRP1BQ9NZR2 4599 aa11.28□□□□□ -0.6
PSEN1-218ENST00000556864 IGLV5-39A0A0G2JS06 123 aa11.28□□□□□ -0.6
PSEN1-218ENST00000556864 TRBV30A0A0K0K1B3 111 aa11.28□□□□□ -0.6
PSEN1-218ENST00000556864 PET117Q6UWS5 81 aa11.28□□□□□ -0.6
PSEN1-218ENST00000556864 Q6ZSA8 131 aa11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 148.5 ms