RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 CRYGDP07320 174 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 CFC1BP0CG36 223 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 CFC1P0CG37 223 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 P0DMU3 169 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 FAM231AP0DMU4 169 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 FAM231CP0DMU5 169 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 TSPEAR-AS2P59090 65 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 CKS1BP61024 79 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 DGAT2L7PQ6IED9 249 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 C3orf56Q8N813 242 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 UBE2WQ96B02 151 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 UBE2E2Q96LR5 201 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 SPXQ9BT56 116 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 SPANXDQ9BXN6 97 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 JPT2Q9H910 190 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 SPANXCQ9NY87 97 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 PYGO1Q9Y3Y4 419 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 PLXNB1O43157 2135 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 VWFP04275 2813 aa3.2□□□□□ -1.9
ATXN3-241ENST00000556374 IGHV3-73A0A0B4J1V6 119 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 TRAV8-4A0A0B4J246 113 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 IGHV1-58A0A0C4DH39 117 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 TINCRA0A1B0GVN0 87 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 H3BT86 120 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 TIMM17BO60830 172 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 TCL1BO95988 128 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 SPINK8P0C7L1 97 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 IFITM1P13164 125 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 HTN1P15515 57 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 LINC00315P59091 139 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 DEFB131AP59861 70 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 MIAQ16674 131 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 MUSTN1Q8IVN3 82 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 ZNRF2Q8NHG8 242 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 NDUFA12Q9UI09 145 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 ICOSQ9Y6W8 199 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 CMYA5Q8N3K9 4069 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 HYDINQ4G0P3 5121 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 PCLOQ9Y6V0 5065 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 RYR2Q92736 4967 aa3.19□□□□□ -1.9
ATXN3-241ENST00000556374 A0A0J9YXY3 114 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 TRBV10-2A0A0K0K1G8 114 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 KNCNA6PVL3 124 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 IGHV3-33P01772 117 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 IGHV3-30-3P0DP02 117 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 EDN2P20800 178 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 MRPS36P82909 103 aaKnown RBP3.18□□□□□ -1.9
ATXN3-241ENST00000556374 LINC01620Q4KN68 170 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 ZFAND6Q6FIF0 208 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 Q6ZUT4 128 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 SBSPONQ8IVN8 264 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 STHQ8IWL8 128 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 DEFB104AQ8WTQ1 72 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 TMEM263Q8WUH6 116 aaKnown RBP3.18□□□□□ -1.9
ATXN3-241ENST00000556374 C4orf3Q8WVX3 66 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 PTH2Q96A98 100 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 LINC01587Q99440 93 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 ANAPC13Q9BS18 74 aa3.18□□□□□ -1.9
ATXN3-241ENST00000556374 A0A087WYN8 130 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 A0A096LNT2 108 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 TRBV30A0A0K0K1B3 111 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 UBE2L6O14933 153 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 INSL3P51460 131 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 CMC4P56277 68 aaPredicted RBP3.17□□□□□ -1.9
ATXN3-241ENST00000556374 HERVK_113P63121 156 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 MEIG1Q5JSS6 88 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 C2orf82Q6UX34 121 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 TMEM101Q96IK0 257 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 VSIG2Q96IQ7 327 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 AMELXQ99217 191 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 LINC00467Q9BRT7 94 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 ZNF702PQ9H963 129 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 UBE2D4Q9Y2X8 147 aa3.17□□□□□ -1.9
ATXN3-241ENST00000556374 IGKV2D-29A0A075B6S2 120 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-241ENST00000556374 TRAV25A0A0B4J276 109 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 TRBV10-1A0A0K0K1A3 114 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 IGKV2-29A2NJV5 120 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-241ENST00000556374 A8MTW9 85 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 K7EQD1 137 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 NDUFA1O15239 70 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 RS1O15537 224 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 IGHV3-53P01767 116 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 HILS1P60008 231 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 HERV-K104P63124 156 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 GAGE2BQ13066 116 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 MRPL23Q16540 153 aaKnown RBP3.16□□□□□ -1.9
ATXN3-241ENST00000556374 GAGE2EQ4V326 116 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 Q6ZSV7 163 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 CARD19Q96LW7 228 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 OPRPNQ99935 248 aaPredicted RBP3.16□□□□□ -1.9
ATXN3-241ENST00000556374 OVOL2Q9BRP0 275 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 GAGE2DQ9UEU5 116 aa3.16□□□□□ -1.9
ATXN3-241ENST00000556374 IGHV3OR16-12A0A075B7B8 117 aa3.15□□□□□ -1.91
ATXN3-241ENST00000556374 TRGV1A0A0A0MS02 117 aa3.15□□□□□ -1.91
ATXN3-241ENST00000556374 TRAV8-3A0A0A6YYJ7 113 aa3.15□□□□□ -1.91
ATXN3-241ENST00000556374 IGHV4-28A0A0C4DH34 117 aa3.15□□□□□ -1.91
ATXN3-241ENST00000556374 MT-ATP8P03928 68 aa3.15□□□□□ -1.91
ATXN3-241ENST00000556374 IGHV4-31P0DP07 118 aa3.15□□□□□ -1.91
ATXN3-241ENST00000556374 XGP55808 180 aa3.15□□□□□ -1.91
ATXN3-241ENST00000556374 KRTAP10-5P60370 271 aa3.15□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 169.3 ms