RNA–Protein interactions for RNA: ENST00000556071.5

LINC00871-202, long intergenic non-protein coding RNA 871, humanhuman

TSL 3 BASIC

Gene LINC00871, Length 554 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00871-202ENST00000556071 COL4A6Q14031 1691 aa-0.72□□□□□ -2.53
LINC00871-202ENST00000556071 A0A0G2JMZ2 1700 aa-0.72□□□□□ -2.53
LINC00871-202ENST00000556071 FAT3Q8TDW7 4589 aa-0.72□□□□□ -2.53
LINC00871-202ENST00000556071 TROQ12816 1431 aaPredicted RBP-0.72□□□□□ -2.53
LINC00871-202ENST00000556071 PAPPA2Q9BXP8 1791 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 NKTRP30414 1462 aaKnown RBP-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 ZNF236Q9UL36 1845 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 DOCK1Q14185 1865 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 FAM236AA0A1B0GUQ0 79 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 FAM236BA0A1B0GV22 79 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 HMGN4O00479 90 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 ARPC5O15511 151 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 SNCGO76070 127 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 SFT2D2O95562 160 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 S100A5P33763 92 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 BTG2P78543 158 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 C10orf113Q5VZT2 155 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 TTC9CQ8N5M4 171 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 FAM167A-AS1Q96KT0 104 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 GSKIPQ9P0R6 139 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 APLNQ9ULZ1 77 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 CDK5RAP2Q96SN8 1893 aa-0.73□□□□□ -2.53
LINC00871-202ENST00000556071 MYH8P13535 1937 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 AKAP13Q12802 2813 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 TNRC18O15417 2968 aaPredicted RBP-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 MYOM1P52179 1685 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 PKD1P98161 4303 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 H0YGG7 62 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 J3QR89 54 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 LINC00694P0DN24 101 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 SCGB1A1P11684 91 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 H1FX-AS1Q4G0G2 97 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 COPS9Q8WXC6 57 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 TMEM191AQ9H0A3 160 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 LINC00846Q9NV44 126 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 CCDC167Q9P0B6 97 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 COPZ2Q9P299 210 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 DNAH9Q9NYC9 4486 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 MYH6P13533 1939 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 SLIT1O75093 1534 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 SYNJ1O43426 1573 aa-0.74□□□□□ -2.53
LINC00871-202ENST00000556071 FAM186AA6NE01 2351 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 CCL22O00626 93 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 FABP1P07148 127 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 MRPL54Q6P161 138 aaKnown RBP-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 SMIM15Q7Z3B0 74 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 KCNRGQ8N5I3 272 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 TCEAL4Q96EI5 215 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 DPH3Q96FX2 82 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 PRO1933Q9H354 126 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 NXT2Q9NPJ8 142 aaKnown RBP-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 CDC42SE2Q9NRR3 84 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 ANKRD30AQ9BXX3 1397 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 DNAH2Q9P225 4427 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 MRC2Q9UBG0 1479 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 HMGXB3Q12766 1538 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 PBRM1Q86U86 1689 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 PATJQ8NI35 1801 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 DOCK2Q92608 1830 aa-0.75□□□□□ -2.53
LINC00871-202ENST00000556071 HIST1H1DP16402 221 aaKnown RBP-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 UBE2D3P61077 147 aa-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 UBE2D2P62837 147 aa-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 MYOZ3Q8TDC0 251 aa-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 LINC01600Q96MT4 127 aa-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 SPANXDQ9BXN6 97 aa-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 FAIMQ9NVQ4 179 aa-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 CRIPTQ9P021 101 aa-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 FHAD1B1AJZ9 1412 aa-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 CFTRP13569 1480 aa-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 CICQ96RK0 1608 aaPredicted RBP-0.76□□□□□ -2.53
LINC00871-202ENST00000556071 MTORP42345 2549 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 MGAM2Q2M2H8 2515 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 PDE4DIPQ5VU43 2346 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 XRN1Q8IZH2 1706 aaKnown RBP-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 FMN2Q9NZ56 1722 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 C1orf167Q5SNV9 1468 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 NLRP1Q9C000 1473 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 EDC4Q6P2E9 1401 aaKnown RBP-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 NCOA3Q9Y6Q9 1424 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 I3L3M4 83 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 M0R2Z0 102 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 IGLC1P0CG04 106 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 SAA2P0DJI9 122 aaPredicted RBP-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 NEFHP12036 1026 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 S100A7L2Q5SY68 101 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 C5orf38Q86SI9 138 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 ARL11Q969Q4 196 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 PPP3R2Q96LZ3 170 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 RERGLQ9H628 205 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 CDKN2A-AS1Q9UH64 79 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 SERP1Q9Y6X1 66 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 REV3LO60673 3130 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 KALRNO60229 2985 aa-0.77□□□□□ -2.53
LINC00871-202ENST00000556071 KIAA1551Q9HCM1 1747 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 MARF1Q9Y4F3 1742 aaKnown RBP-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 NIPBLQ6KC79 2804 aaeCLIP-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 TET3O43151 1660 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 DIP2CQ9Y2E4 1556 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 GRIN2AQ12879 1464 aa-0.78□□□□□ -2.53
LINC00871-202ENST00000556071 CLIP1P30622 1438 aa-0.78□□□□□ -2.53
Retrieved 100 of 20,778 RNA–protein pairs in 101.9 ms